Dbfetch
LOCUS NM_064375 2139 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Zyxin (zyx-1), partial mRNA. ACCESSION NM_064375 VERSION NM_064375.10 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2139) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2139) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2139) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2139) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On May 3, 2023 this sequence version replaced NM_064375.9. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..2139 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="II" gene <1..2139 /gene="zyx-1" /locus_tag="CELE_F42G4.3" /db_xref="GeneID:174951" /db_xref="WormBase:WBGene00006999" CDS 1..1812 /gene="zyx-1" /locus_tag="CELE_F42G4.3" /standard_name="F42G4.3a" /note="Confirmed by transcript evidence" /codon_start=1 /product="Zyxin" /protein_id="NP_496776.1" /db_xref="GeneID:174951" /db_xref="WormBase:WBGene00006999" /translation="MGPPPPPPPPPLLPSGEILPSRKWKTEDAPRRNNHPAPAPPKPS RPTVDASALQHAAARLRKTGYNEPVRGDVENLSDGRLDRPHQQLPDGDRTYRANLQQL AQPKTRAEIPSPPTYSNQPRPLGDFHRDPNALSQFQQSREALLSSTSPTSNYSPINKF SSSTLTQYANKSPSPPSFGNSNSEATYVSPYSSKHSYPTNFRSYHKDDDYFNNTATTA TTTTSSNSLNENNNSNKYGNKETVLQWSEPYDPSKIRRSQSPIRNAREMIHEYSTTNY VTEVQQPPPPPPDLYQRMTQARTFLQNSLAKQLRDEGLTESQKAANRNQTGALSASSS IPFDASQIVKNSYNGDEVDHLVHQMRTKLNQPADTSPSIVQYPRRQAPDSSRANYSAT TSTSFSSSTTRKIMNINICVGCGKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGAS FYNIDDKPTCEGCYQNSLEKCTACNRAISDKLLRACGGVYHVNCFVCFSCKKSLDGIP FTLDKDNNVHCVPCFHDKFAPRCALCSKPIVPQDGEKESVRVVAMDKSFHVDCYKCED CGMQLSSKLEGQGCYPIDNHLLCKTCNGNRLRVVSST" ORIGIN 1 atgggacccc cgcctccgcc tccaccaccc cctctactcc catccggaga gatactacca 61 tctcgcaaat ggaagacaga ggatgcacca cgacgtaaca accatcccgc acctgcgccg 121 cccaagccgt cccgtcccac agtggacgct tcggcactac agcacgccgc agcacgtctg 181 cgtaagaccg gctacaacga accggttcga ggtgacgtcg agaatctatc cgatggacga 241 ttggaccgac cgcatcaaca attgcctgac ggagatcgga cgtatcgcgc gaacctccaa 301 caattggctc agccgaaaac cagagcagag attccttctc cgcccactta ttccaaccaa 361 cctcgtccgc tcggcgactt tcatcgagac cccaatgcgt taagccaatt ccagcaatcc 421 cgagaggctc ttctatcaag tacttcccca acttcaaact atagcccaat caataaattc 481 tcatcatcca ctctaactca atacgcaaac aagtccccgt cgcctccatc atttggtaat 541 agtaatagtg aggcaactta tgtgtctcca tattcttcta aacactcata tcctacaaac 601 ttccgaagct atcacaagga cgacgattat tttaataaca cggcaactac ggcaaccacc 661 acaacatcaa gcaatagctt aaacgagaac aataattcga ataaatatgg caataaggag 721 acggttcttc agtggtcgga gccctacgat ccaagtaaaa tccgccgctc acagtcccca 781 atccgcaacg ctcgagaaat gatccacgag tactcgacaa cgaactacgt cacagaagtc 841 cagcaaccac ctccaccacc accagatctt tatcaacgaa tgactcaagc aagaactttc 901 ctccagaatt ccctggcaaa gcagctacgc gacgaggggc tcaccgagtc acaaaaagcc 961 gcgaaccgta atcagacagg tgctctgagc gcgtcttctt cgattccctt cgatgcgtcg 1021 caaattgtca agaactctta caacggcgat gaggtggatc atctggtgca tcagatgaga 1081 acaaagctga atcagccagc agacacctca ccaagcatcg tacagtaccc ccgacgccag 1141 gcaccggact cgtcgcgagc aaattactcg gcaactactt ccacgtcttt ctcctcctcc 1201 acaacacgca aaatcatgaa tatcaatatc tgcgttggtt gtggcaaaga gatcaccgga 1261 gaccagccag gatgcaatgc aatgaatcag atcttccacg tggattgctt caaatgtggt 1321 cagtgctcga agacacttgc cggcgcctcc ttctacaata tcgatgataa gccgacatgt 1381 gaaggctgct atcagaactc actggagaag tgtaccgcgt gcaaccgagc gatcagtgac 1441 aaacttttga gagcctgtgg aggggtctac catgtgaact gcttcgtgtg cttctcctgc 1501 aaaaagtctc tcgatggaat tccttttact cttgacaagg acaacaatgt gcactgtgtc 1561 ccatgcttcc atgacaaatt cgcgccacga tgtgcactct gcagtaagcc catagttcca 1621 caagacggag aaaaggagtc ggttcgtgtc gtagccatgg ataaatcatt tcacgttgac 1681 tgctacaaat gcgaagactg tggaatgcaa ttgtcatcaa agctggaagg ccaaggatgc 1741 tacccaatcg ataaccacct gctctgcaag acctgtaatg gaaaccggct ccgcgtggtc 1801 agctccacgt aagcgagcca tcagtcaaca atttccattc cccccatccg tttttcttca 1861 actgccatcc gtcttttcct gtattttttt tcattttttc accccaaaat tttccgtctt 1921 ttctacgccg tcggtgcccc cattccatca acgcttcttc gtcctctaat agtgttccca 1981 aagtacgtag accgtctcct tttgtaaatt cttccccgaa aaaacaaaac caatttttaa 2041 cttgcttgtt cctttttacc gtggattgat tgatttatat taaatttcta tttcattttt 2101 tcccccagtt ttttatcgaa taaataagag cctctcatt //