Dbfetch
LOCUS NM_063461 3881 bp mRNA linear INV 15-APR-2020 DEFINITION Caenorhabditis elegans Alpha-(1,3)-fucosyltransferase fut-1 (fut-1), mRNA. ACCESSION NM_063461 VERSION NM_063461.7 DBLINK BioProject: PRJNA158 BioSample: SAMEA3138177 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 3881) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 3881) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (14-APR-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3881) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (14-FEB-2020) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 3881) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Apr 15, 2020 this sequence version replaced NM_063461.6. FEATURES Location/Qualifiers source 1..3881 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="II" gene 1..3881 /gene="fut-1" /locus_tag="CELE_K08F8.3" /db_xref="GeneID:174400" /db_xref="WormBase:WBGene00001505" CDS 73..1374 /gene="fut-1" /locus_tag="CELE_K08F8.3" /standard_name="K08F8.3" /note="Confirmed by transcript evidence" /codon_start=1 /product="Alpha-(1,3)-fucosyltransferase fut-1" /protein_id="NP_495862.2" /db_xref="EnsemblGenomes-Gn:WBGene00001505" /db_xref="GeneID:174400" /db_xref="GOA:G5EDR5" /db_xref="InterPro:IPR001503" /db_xref="InterPro:IPR031481" /db_xref="InterPro:IPR038577" /db_xref="UniProtKB/Swiss-Prot:G5EDR5" /db_xref="WormBase:WBGene00001505" /translation="MTARSIKLFFARWKYLMFACCITYLLVIYAPISKSEQKDWKEGE IELSNDHELDVPILQKEELKPQQRPSFEENVPKKKTFNFNPVGKEPFDVEEVLTSSDI KLEERMTATVIPGQKRLILSWNAGHSQDNLQGCPDWNCEFTQVRARAPDADAVLIAHM DNDFVPKPNQYVVYFSQESPANSGIQIPRPDYINMTLGFRHDTPAGSPYGYTVKLGAK SRKTGQVVDANLVNGKAKGAAWFVSHCQTNSKREDFVKKLQKHLQIDIYGGCGPMKCA RGDSKCDTMLDTDYHFYVTFENSICEDYVTEKLWKSGYQNTIIPLVLKRKLVEPFVPP NSFIAIDDFKSVKEMGDYLNYLMNNKTAYMEYFEWRHDYKVVFLDGSHHDVLERPWGF CQVCRMAWTEPRQKVLIPNWDAYWRQTCEKDGTLVDSIPLD" ORIGIN 1 cgtttcccct aatttcactt tgtcatatta attttcgagc taaaaattta atttaaggtc 61 taattactcc ggatgactgc aagaagcatc aaacttttct ttgcaagatg gaaatattta 121 atgtttgctt gttgtatcac atatcttctt gttatttatg ctccaatttc aaaatctgaa 181 caaaaggatt ggaaagaagg cgaaatagag cttagcaatg atcatgaatt agatgttcca 241 attcttcaaa aagaagaatt gaagccacaa caacgaccgt catttgaaga aaatgtaccc 301 aaaaagaaga cttttaattt taatccagtt ggaaaggaac catttgatgt ggaagaagtg 361 ctcacatcaa gtgatattaa attagaagaa cgaatgaccg caactgtaat acctggacaa 421 aagcgattaa tcctgtcatg gaacgccggt cattctcaag ataatcttca aggatgccct 481 gattggaatt gtgaattcac gcaagtccgt gcaagggctc cagatgcaga tgctgttctt 541 attgctcata tggacaatga ttttgtcccg aagcctaatc aatatgtagt gtatttcagc 601 caggagtcac cagctaattc tggaattcaa attccaaggc ctgattatat caacatgaca 661 ctgggatttc ggcacgatac acctgctggt tctccttatg gatacactgt taaattgggc 721 gccaagtccc gaaaaactgg acaagttgtg gatgccaatt tagtcaatgg aaaagcaaaa 781 ggagctgctt ggtttgtgag ccattgtcag acaaacagca agagagaaga ttttgttaaa 841 aaactacaga aacatttgca aattgacatt tacggtggtt gtggtccaat gaaatgtgca 901 cgtggagaca gcaaatgtga cacgatgctg gataccgatt atcatttcta tgtcacattt 961 gaaaattcaa tttgcgaaga ttatgtgact gaaaaacttt ggaaatcggg atatcaaaat 1021 actattattc cattggtgtt aaagagaaag cttgtcgagc cttttgtacc accaaacagc 1081 ttcattgcta ttgacgattt taaaagtgtg aaagaaatgg gagactatct caattattta 1141 atgaataata agaccgccta catggaatac ttcgaatgga ggcacgacta caaagttgta 1201 tttcttgatg ggtctcacca cgatgttctt gagagaccgt ggggcttctg tcaagtttgt 1261 cgaatggctt ggacggagcc acggcagaag gttttaattc cgaattggga tgcgtattgg 1321 cggcaaacat gtgaaaaaga tggaacacta gtagattcta ttccgttaga ttagttgtaa 1381 atttaagcta gagtattttc ccaattatta tttcaaagca gaactatttc tgttagaatt 1441 tcttctgtat ttttcttaat tgttcttgtt ccatctattc ttcacgggtt ttattcttta 1501 agactacatg attgttttca catttactga tatcggtatt gattcttcat ttatttattc 1561 agttgggttt tctcaactgg tatttaatat ttcctccttt ctcttggtgt tttatgggta 1621 catctttttt gtgatttgaa ttaatttgtt cgcttttttt ttcttgtttt tttagttgat 1681 agcaaaaggc aatcaatacg gagaacacat ccggatatca ttccaattca aagtcacaac 1741 atccgctgag gataatccca cgatcaagta gcactgacct ctgtcgttcc acttgaaact 1801 ttgaaattcc gcaggaacgt ggatgggaaa tgtttaacta ttcgttttcc cgcagcacgc 1861 ctcctacaat ccattgtgct caagtgagct ctccttcagg ttctctgtat gttaccacaa 1921 caacctcact tctcctgttt tcctttttct ttctatttcg gcatctagta aaaaggagag 1981 agagaggaga aggaggagaa accaccattt ccgtgctctc ccagattata cctttatatg 2041 ttacgtaaat ggatagaatc cgcttttagt gttacgtcga gcgttgcaat atctgtttct 2101 caagttattt catgcttctc aagttgtact tttgttggtg ttgtgccaga ttataaaatt 2161 agtggcacaa tgatcatatc ctaaacgtat ttacaagtat gaaatctttg aaagtcctac 2221 ctaccgtgtt ttctctgtta gtctttaacc ccctccgttc tactttgaca gcgtatatct 2281 cggctccctt cggttttata aaaactatca actgacaaaa tacaggaaaa gaattttcat 2341 atatttgaat tgtaaaactt ttttgataaa gctaaaaaca actgagatat gggtcgtgta 2401 agttttcacc aaacttgtat tttgaataat tgcatcctta ttttttgaaa aatcaaaacc 2461 aattcaaaaa ttcgttgaaa aacaggacaa tcctagtaat agtaaacaca tctacttttt 2521 cctccatttt ctagttgaca catgtttgta cgagcctgaa gatgcaaaca tttgtgtaat 2581 tgtccacaca ttgaccatcc cctcatacgg accgtctttt gatagatagt atactcttat 2641 tcacgtcacg atcggatcgc aaataaaaaa gttttgattc catttttgca gttatcactt 2701 ttgcatgatg tgaattttga gatggacaac agcaagaaga agaaaaccaa aaagaaagaa 2761 aatgttcagc atagctttta tttttatttg gtgctgagat ttttagcagc agtaagttca 2821 ttttttaaat agttctttgt attcaaaacc tgtaaaataa tgtaagcaaa tctgcaagaa 2881 ttgccgtgag gctataactt gaaaagatct tagaaatttt tgggcacctt tccgaacatg 2941 gaagtaataa ttaaaaatat tttcagaaca cttatttatt tcttctttct tttgacagtt 3001 tgagatatat taatgtttcc aaactaaaat gttttctatc caatccaaaa acttgagaaa 3061 taaaacagtt ataatttcag attttttgta ttattgtaat attcataatt ggactcagcc 3121 agtattggac taaccgagta tcagccgtat ttggactggt aagctataat aatcttcaag 3181 gtcagaactt aatgttttgt ttcagctatt cgtaatcatt gcactactgt tttcagcttc 3241 agcggtgtct atattattta tatgggatgt tgaaactaca accatagtta aggtaatttt 3301 taaaagattt taagtttgaa aaaaaaccca aacttcttaa ttcgttttat ttttaatgtt 3361 gataacgcgt agatttgtac tgtcaaaaaa ttccagagat gtctattcac ttttgttttt 3421 gctctttcca ttctcgtctc tgcaattctg tttttaattg ccaatgatgg ttgtgactcc 3481 cgagcaataa ctcaatacgg atgttatcaa tcagtttcca ctggaacatt ccaagttgct 3541 tcagtatttt gctttttggt tctagtattt ggacttctgg atctaggcct gaatgccttc 3601 tatttttatc gtaattcaaa aaaggcgcca atttatgaca ttccgccacc gtctgttgcc 3661 gtcatcgaaa cggaaaagtg ggtcaagatt tgcataaaat taggaaatat tttatatttc 3721 atgtcctttc agaagtatac atgacattta catggagtat caacgaaaag ggcaaacaag 3781 ttctgtttaa tggaaaagta atcaaataat tatcaatgct caactttaaa ttcactttct 3841 cataataatt tgtatatatg aaacattaat aaaacaattt t //