Dbfetch
LOCUS NM_062597 2611 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Tyrosine-protein phosphatase vhp-1 (vhp-1), mRNA. ACCESSION NM_062597 VERSION NM_062597.4 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2611) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2611) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2611) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2611) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On May 27, 2020 this sequence version replaced NM_062597.3. FEATURES Location/Qualifiers source 1..2611 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="II" gene 1..2611 /gene="vhp-1" /locus_tag="CELE_F08B1.1" /db_xref="GeneID:173904" /db_xref="WormBase:WBGene00006923" CDS 211..2031 /gene="vhp-1" /locus_tag="CELE_F08B1.1" /standard_name="F08B1.1b" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="Tyrosine-protein phosphatase vhp-1" /protein_id="NP_494998.1" /db_xref="GeneID:173904" /db_xref="WormBase:WBGene00006923" /translation="MGGQPFEAFRKNRKRKKTKNKKKRRNNNNSKNKTPNTFPNEIEE QDPVSSLPTFPAKKFGLKLQLTLTSSPTNSSSPISSSSPTNGGFKQFAQQYPQLCESS EGMTRLPQSLSQPCLSQPTGDGITLITPNIYLGSQIDSLDETMLDALDISVVINLSMT CPKSVCIKEDKNFMRIPVNDSYQEKLSPYFPMAYEFLEKCRRAGKKCLIHCLAGISRS PTLAISYIMRYMKMGSDDAYRYVKERRPSISPNFNFMGQLLEYENVLIKDHVLDYNQA SRPHRHMDYYGPSDLCPPKVPKSASSNCVFPGSTHDESSPSSPSVSEGSAASEPETSS SAASSSSTASAPPSMPSTSEQGTSSGTVNVNGKRNMTMDLGLPHRPKALGLPSRIGTS VAELPSPSTELSRLSFNGPEAIAPSTPILNFTNPCFNSPIIPVASSSREVILTLPTPA ASSSSSTSSEPSFDFSSFESSSSSSIVVENPFFASTEVPAGSSSISTPSGSQSTPASA SSSAASRCRMKGFFKVFSKKAPASTSTPASSTPGTSRAARPECLRSSGIIISAPVLAI TEEEDAESPESGFNEPEVGEEDDDSVSICSTSSLEIPCHQ" ORIGIN 1 atgacgacgg cagggtggac gtcttctatg ttctttccct catccacaca tactatttcg 61 agaagtcctc taacaatctg cggtaccttc taggcttatg tcctcccccg tccaactcct 121 cccacttctt ccactccttc tgaatacttc caaacgagcc ccgctatagt gctgtgctca 181 gtggaccctc caagttgcca aatttttcaa atgggtggtc aaccgtttga ggcgttccgt 241 aagaatcgca aacgaaagaa gacgaaaaat aagaagaaac gaagaaataa caataattca 301 aagaacaaaa ctcccaacac ttttcctaat gaaattgaag agcaagaccc cgtatcatca 361 cttccgacat tcccagctaa aaaatttgga ctaaaacttc aacttactct cacttcttct 421 cctactaact catctagtcc tatttcgagt tcttcaccaa ccaatggtgg cttcaaacaa 481 ttcgcacaac aatatcctca attgtgcgag agttcagaag gaatgactcg tttgccacaa 541 agcctctcac aaccatgtct atcccaacca actggagatg gaatcacatt gatcactcca 601 aatatttatc tcggaagtca aattgatagc ttggatgaga ccatgttaga tgctcttgat 661 atcagtgttg tcatcaacct ttctatgact tgccccaaat ccgtatgcat caaagaagat 721 aagaatttta tgagaatccc agtaaatgac tcctatcaag aaaaactttc tccatatttt 781 ccaatggctt atgaatttct tgaaaaatgc agaagagccg gaaagaagtg cctgattcat 841 tgtttggctg gcatttctag aagccccaca ctggctattt cgtatattat gcgctacatg 901 aaaatgggaa gcgatgatgc atacagatat gtgaaagagc gtcgcccttc gatctcgcca 961 aacttcaatt ttatgggaca attgcttgaa tacgagaatg ttttaatcaa agatcatgtg 1021 cttgactaca atcaagcttc aagaccacac cgacatatgg actactatgg gccatctgat 1081 ctgtgtccac caaaggttcc aaaaagtgca tcatccaact gtgtattccc tggaagtact 1141 catgatgaat catcaccatc ttctccttct gtatcagaag gatcagctgc aagtgagcct 1201 gagacatcat catcagctgc ttcatcttca tcaactgcat ctgcacctcc atcgatgcct 1261 tctacaagtg aacaaggaac atcgtcagga acagttaatg tcaatggaaa gagaaatatg 1321 accatggatt tgggacttcc ccatcgccca aaagctcttg gacttccatc aagaatcggt 1381 acttctgttg cggagctgcc gtctccatca actgaacttt cgagattaag ctttaatggt 1441 ccagaagcaa ttgctccatc tactccaatt cttaacttta ccaacccatg tttcaattct 1501 ccaatcatcc cagttgcatc tagctcgcga gaagttattc tgacccttcc aactccagct 1561 gcttcatctt cttcttcaac atcatctgaa ccatcttttg atttctcatc atttgaatct 1621 tcatcatcgt cttcaattgt tgtcgagaac ccatttttcg ccagcacaga agtgcctgct 1681 ggatcatcat cgatatccac accatctgga tcacaatcaa ctccagcatc tgcttcttca 1741 tcagctgctt ctagatgcag aatgaaggga ttctttaaag tattcagcaa gaaggctcca 1801 gcttcaactt ccaccccggc ttcctcaacc cctggaactt cccgagcagc tcgtccagaa 1861 tgtctccgat catccggcat cattatctca gcaccagttc ttgcaattac agaagaagaa 1921 gatgccgagt ctccagaatc ggggtttaac gaacccgaag tcggagaaga agacgatgat 1981 tcggtgtcaa tttgctcgac gagctctttg gaaattccgt gtcaccagta attttgtgaa 2041 catcattctc tagtccacac ataagtttct tcaaattgaa gaagaactat gaaaaatgat 2101 tgaaaattct ttatttcaat cagaaccatt tttcatccat ctctcccaac atcattactc 2161 tcattacaat atgtgataat tgtatcccct tcatcaatcc atcccacttc accccctctc 2221 cacattttta aagtgtcgac gggtactgtg tgctcttgat tttgagccct gacccccttc 2281 cccaagttct tcttcatgaa aagcaatatt tgaactcgtg atgttcgatt ctttccgttt 2341 cttttttatt tttttttatt ttttatatct tgaatccatt agagtatccc aattttatca 2401 accatgttac tttatttgac attacatttt ttgtatataa cccggcaaat ttcatttatt 2461 tataccattc aaccccacca accaaaacat cacccccaat ttttcatttt taaacctcta 2521 ctgattctgg tctagcctga cgtaccacac atttaattat gtggaattga aagaataatt 2581 caattaataa taatgaaaaa agtttttttt t //