Dbfetch
LOCUS NM_062582 1511 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Intestinal acid phosphatase (pho-1), mRNA.
ACCESSION NM_062582
VERSION NM_062582.5
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1511)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1511)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1511)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1511)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003280).
On Feb 2, 2021 this sequence version replaced NM_062582.4.
FEATURES Location/Qualifiers
source 1..1511
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="II"
gene 1..1511
/gene="pho-1"
/locus_tag="CELE_EGAP2.3"
/db_xref="GeneID:173896"
/db_xref="WormBase:WBGene00004020"
CDS 15..1364
/gene="pho-1"
/locus_tag="CELE_EGAP2.3"
/standard_name="EGAP2.3"
/note="Partially confirmed by transcript evidence"
/codon_start=1
/product="Intestinal acid phosphatase"
/protein_id="NP_494983.1"
/db_xref="EnsemblGenomes-Gn:WBGene00004020"
/db_xref="EnsemblGenomes-Tr:EGAP2.3.1"
/db_xref="EnsemblGenomes-Tr:EGAP2.3.2"
/db_xref="GeneID:173896"
/db_xref="GOA:Q19076"
/db_xref="InterPro:IPR000560"
/db_xref="InterPro:IPR029033"
/db_xref="InterPro:IPR033379"
/db_xref="UniProtKB/Swiss-Prot:Q19076"
/db_xref="WormBase:WBGene00004020"
/translation="MVSAISIVAIFALEGFVTTYSDGTKDLVFVQTLWRHGDRSPTKT
FKTDPFQEDAWQFGGGGWGQLSPAGMKQHLNLGKMLRNRYVTNYNFLPNKYNAKQIYV
RSTDVNRTIISAMSNLLGQYGQNDNSSTPGLDYPDVDGWPAGYVPIAVHTVDDDTDHL
GNMESTCPFKDQVWELAKTSDEVKSFVNSADVQAVLGNLTNYCGQPVDIDNLWIITNA
LYIEQIYYNATLRTKNNWFTDAFYAKADAINDQVQLFQNGIFKTVPNIVNGHDVGVLT
RKVRGGPILNDMVMHINLKLMCQGQTTPNCTWINNLKNYIYSAHDTTIYAFFSALLIE
EYAVKPSGGYPLYSAAVLLELYIDSVDKKPYFKMVYHEQDGSGFKDVTMGIQGCPQNS
SYCDLDILRNFANTIKPDQPIDQWCLTDLNKSSSFATVSMLFIAAILAINNNFLGLF"
ORIGIN
1 gggtaacttt tactatggtc tctgccattt ccattgtggc aatttttgcc cttgagggtt
61 tcgtgactac atactctgat ggtactaaag accttgtttt tgttcaaacg ctttggagac
121 acggagatcg ttcaccaaca aaaacgttca aaactgatcc atttcaagag gatgcttggc
181 aattcggagg tggtggatgg ggacagttga gcccggcagg aatgaaacaa cacttgaatc
241 ttggtaaaat gctccgtaat cgctacgtca caaactacaa ctttttgcct aacaagtaca
301 acgccaaaca gatctatgtc cggtctactg atgttaatag aacaattatt tctgcaatgt
361 ccaacttgct cggacaatac ggacaaaatg acaacagtag cacaccaggc ctagattatc
421 cagatgttga tggatggcca gctggatatg tcccaattgc tgtgcataca gtcgatgatg
481 acactgatca tttgggtaac atggaatcta catgcccatt caaagatcaa gtatgggaac
541 ttgcaaaaac ttccgatgaa gttaagagct ttgtcaactc tgctgatgtt caagcagtgc
601 taggaaatct tacgaattac tgcggacagc cagttgacat tgataacctt tggattatca
661 ccaatgctct ttacattgaa caaatttact ataatgccac tcttcgtaca aaaaacaatt
721 ggttcactga tgccttctat gcaaaagctg atgcaattaa tgatcaagtt caacttttcc
781 aaaatggaat ttttaaaact gttccaaaca ttgtcaacgg acatgatgta ggagtgttaa
841 ctcgaaaggt cagaggtgga ccaattttga atgatatggt tatgcatata aatctcaaat
901 tgatgtgcca gggtcagaca actccaaatt gcacatggat taataatttg aagaattaca
961 tttactctgc tcacgacacc acaatctacg ccttcttctc cgcacttcta attgaagaat
1021 acgctgtaaa accgtctggt ggatatccat tgtattctgc tgcagtcctt ttagagcttt
1081 acattgatag tgtcgacaag aaaccatact tcaaaatggt atatcacgag caagacggaa
1141 gtggattcaa agatgtgact atgggaattc aaggatgtcc tcaaaatagt tcatactgtg
1201 atttagatat tctcagaaac tttgccaata ctatcaagcc agatcaacca atcgatcagt
1261 ggtgcttaac cgatttgaac aagagttcca gctttgctac agtctcaatg ctctttattg
1321 cagcaattct tgccatcaac aacaacttcc taggactgtt ttaattgttt tgttcttaaa
1381 tttgtaaatt attagcatta aattgtaatt tattcgcttc gttccagtga gataaataca
1441 cgtaagatcg tacatggtta tacataacca tttcaaaaat aaattccccc cgtaataaaa
1501 ttaaattatg a
//