Dbfetch

LOCUS       NM_062582               1511 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans Intestinal acid phosphatase (pho-1), mRNA.
ACCESSION   NM_062582
VERSION     NM_062582.5
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 1511)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1511)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 1511)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003280).
            
            On Feb 2, 2021 this sequence version replaced NM_062582.4.
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="II"
     gene            1..1511
                     /gene="pho-1"
                     /locus_tag="CELE_EGAP2.3"
                     /db_xref="GeneID:173896"
                     /db_xref="WormBase:WBGene00004020"
     CDS             15..1364
                     /gene="pho-1"
                     /locus_tag="CELE_EGAP2.3"
                     /standard_name="EGAP2.3"
                     /note="Partially confirmed by transcript evidence"
                     /codon_start=1
                     /product="Intestinal acid phosphatase"
                     /protein_id="NP_494983.1"
                     /db_xref="EnsemblGenomes-Gn:WBGene00004020"
                     /db_xref="EnsemblGenomes-Tr:EGAP2.3.1"
                     /db_xref="EnsemblGenomes-Tr:EGAP2.3.2"
                     /db_xref="GeneID:173896"
                     /db_xref="GOA:Q19076"
                     /db_xref="InterPro:IPR000560"
                     /db_xref="InterPro:IPR029033"
                     /db_xref="InterPro:IPR033379"
                     /db_xref="UniProtKB/Swiss-Prot:Q19076"
                     /db_xref="WormBase:WBGene00004020"
                     /translation="MVSAISIVAIFALEGFVTTYSDGTKDLVFVQTLWRHGDRSPTKT
                     FKTDPFQEDAWQFGGGGWGQLSPAGMKQHLNLGKMLRNRYVTNYNFLPNKYNAKQIYV
                     RSTDVNRTIISAMSNLLGQYGQNDNSSTPGLDYPDVDGWPAGYVPIAVHTVDDDTDHL
                     GNMESTCPFKDQVWELAKTSDEVKSFVNSADVQAVLGNLTNYCGQPVDIDNLWIITNA
                     LYIEQIYYNATLRTKNNWFTDAFYAKADAINDQVQLFQNGIFKTVPNIVNGHDVGVLT
                     RKVRGGPILNDMVMHINLKLMCQGQTTPNCTWINNLKNYIYSAHDTTIYAFFSALLIE
                     EYAVKPSGGYPLYSAAVLLELYIDSVDKKPYFKMVYHEQDGSGFKDVTMGIQGCPQNS
                     SYCDLDILRNFANTIKPDQPIDQWCLTDLNKSSSFATVSMLFIAAILAINNNFLGLF"
ORIGIN      
        1 gggtaacttt tactatggtc tctgccattt ccattgtggc aatttttgcc cttgagggtt
       61 tcgtgactac atactctgat ggtactaaag accttgtttt tgttcaaacg ctttggagac
      121 acggagatcg ttcaccaaca aaaacgttca aaactgatcc atttcaagag gatgcttggc
      181 aattcggagg tggtggatgg ggacagttga gcccggcagg aatgaaacaa cacttgaatc
      241 ttggtaaaat gctccgtaat cgctacgtca caaactacaa ctttttgcct aacaagtaca
      301 acgccaaaca gatctatgtc cggtctactg atgttaatag aacaattatt tctgcaatgt
      361 ccaacttgct cggacaatac ggacaaaatg acaacagtag cacaccaggc ctagattatc
      421 cagatgttga tggatggcca gctggatatg tcccaattgc tgtgcataca gtcgatgatg
      481 acactgatca tttgggtaac atggaatcta catgcccatt caaagatcaa gtatgggaac
      541 ttgcaaaaac ttccgatgaa gttaagagct ttgtcaactc tgctgatgtt caagcagtgc
      601 taggaaatct tacgaattac tgcggacagc cagttgacat tgataacctt tggattatca
      661 ccaatgctct ttacattgaa caaatttact ataatgccac tcttcgtaca aaaaacaatt
      721 ggttcactga tgccttctat gcaaaagctg atgcaattaa tgatcaagtt caacttttcc
      781 aaaatggaat ttttaaaact gttccaaaca ttgtcaacgg acatgatgta ggagtgttaa
      841 ctcgaaaggt cagaggtgga ccaattttga atgatatggt tatgcatata aatctcaaat
      901 tgatgtgcca gggtcagaca actccaaatt gcacatggat taataatttg aagaattaca
      961 tttactctgc tcacgacacc acaatctacg ccttcttctc cgcacttcta attgaagaat
     1021 acgctgtaaa accgtctggt ggatatccat tgtattctgc tgcagtcctt ttagagcttt
     1081 acattgatag tgtcgacaag aaaccatact tcaaaatggt atatcacgag caagacggaa
     1141 gtggattcaa agatgtgact atgggaattc aaggatgtcc tcaaaatagt tcatactgtg
     1201 atttagatat tctcagaaac tttgccaata ctatcaagcc agatcaacca atcgatcagt
     1261 ggtgcttaac cgatttgaac aagagttcca gctttgctac agtctcaatg ctctttattg
     1321 cagcaattct tgccatcaac aacaacttcc taggactgtt ttaattgttt tgttcttaaa
     1381 tttgtaaatt attagcatta aattgtaatt tattcgcttc gttccagtga gataaataca
     1441 cgtaagatcg tacatggtta tacataacca tttcaaaaat aaattccccc cgtaataaaa
     1501 ttaaattatg a
//