Dbfetch
LOCUS NM_060875 1409 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Tr-type G domain-containing protein
(efsc-1), partial mRNA.
ACCESSION NM_060875
VERSION NM_060875.6
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1409)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1409)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1409)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1409)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003279).
On May 27, 2020 this sequence version replaced NM_060875.5.
COMPLETENESS: incomplete on the 5' end.
FEATURES Location/Qualifiers
source 1..1409
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="I"
gene <1..1409
/gene="efsc-1"
/locus_tag="CELE_C47B2.7"
/db_xref="GeneID:173172"
/db_xref="WormBase:WBGene00008133"
CDS 1..1380
/gene="efsc-1"
/locus_tag="CELE_C47B2.7"
/standard_name="C47B2.7a"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Tr-type G domain-containing protein"
/protein_id="NP_493276.1"
/db_xref="EnsemblGenomes-Gn:WBGene00008133"
/db_xref="EnsemblGenomes-Tr:C47B2.7a"
/db_xref="GeneID:173172"
/db_xref="GOA:O62109"
/db_xref="InterPro:IPR000795"
/db_xref="InterPro:IPR007034"
/db_xref="InterPro:IPR009000"
/db_xref="InterPro:IPR027417"
/db_xref="UniProtKB/TrEMBL:O62109"
/db_xref="WormBase:WBGene00008133"
/translation="MTSPPSTSSSVGPLNLGILGHVDSGKTTLTRRIAELGSTSAFDA
HATSTTTDGIRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVI
SESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQNLKLAIESRIFEPKRDEEGE
FLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVA
AGARAAFLVAPSFDEHRFSRCICGPLGTLKSTKFVLATVEPIQFFRKSINSKSKIHVA
VAFETVMAECQFLKEKENGEFEMLPSLLAPCQVLFSFEKSIFLPENYSNPFMAARLEQ
QPGSGCRFAFSGIFSQILPENGKNLPPRFTRKCRKGHVERVEKDGFSAICTGMFKAET
NFDVFRGFQICTSSGPRGKIEGAFGKSGKFRVTFAEKIDGILTEKEEISLFLKKYHNE
NRLVSYVPD"
ORIGIN
1 atgacgtcac caccatctac gtcatcatcg gtaggacctc tcaatctagg cattctgggc
61 cacgtggatt cgggaaaaac gacattaaca cgtcgaatcg ccgaactcgg atcaacgtca
121 gcattcgacg cccacgcaac atccacaacc accgatggaa tccgccgaaa tactttggat
181 ttgggattct ctacgatgac gtcactatct ggaaggcgat tggctcttat cgattgccct
241 gggcattcgg gattaatacg ggcggtcttg gcagcgagta ctgtatttga tatggctatt
301 gtgatctcag aatctgcgaa aaaagtgcga aaaggcctaa aatcgatggg cgttgacgag
361 aattctccga tcgttgagat gtccctggcc gatggatatt ttaaagaaga aatgctccaa
421 aatctaaaac tcgccattga atccaggatt tttgagccaa aacgtgacga ggaaggcgaa
481 ttcctcatcg caattgatca ctgctttgca atcaaaggac aaggaactgt gcttactggg
541 acagtgatac gtggagtttt aagactaaac accgaaatcg aatttcccgc gctcaacgag
601 aaacgtcgtg tcaagaccct cgaaacatgg aaacaacgtg ttggccaagt ggcggcgggc
661 gcccgagccg ccttccttgt cgccccctca tttgatgaac atcgtttctc ccgttgcatc
721 tgcggaccgc tcggaaccct aaaatccacg aaattcgtgc tggcaaccgt ggaacctatc
781 cagtttttta gaaaatcaat aaattccaaa tcgaaaatcc acgtggcagt cgcttttgag
841 accgttatgg cggaatgtca atttctcaaa gaaaaggaaa atggagaatt tgaaatgctt
901 ccaagtctcc tggcaccgtg ccaagtgcta ttttcattcg aaaaatcgat atttctaccc
961 gaaaactaca gtaacccgtt catggccgcc cgtctcgaac aacaaccggg cagtggatgc
1021 cgtttcgctt tttccggaat tttcagccaa attttgcctg aaaatgggaa aaatttgccg
1081 ccgagattta cgagaaaatg cagaaaagga catgtggaaa gagtggaaaa agatggattt
1141 tcggcgattt gtactggaat gttcaaggcc gaaacgaatt ttgacgtttt tcgcggtttt
1201 cagatctgca cctcatctgg tccacgtgga aaaatcgaag gcgctttcgg aaaatcgggc
1261 aaatttcgtg taaccttcgc cgaaaaaatc gacggaattc tgacggagaa ggaggaaatt
1321 tcactttttt tgaagaaata tcataatgag aatagacttg tcagttatgt acctgattaa
1381 ttttaaaaaa ataaaaattt gaatatttt
//