Dbfetch
LOCUS NM_001384053 2943 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Nuclear Pore complex Protein (npp-9), mRNA. ACCESSION NM_001384053 VERSION NM_001384053.2 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2943) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2943) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2943) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2943) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Feb 2, 2021 this sequence version replaced NM_001384053.1. FEATURES Location/Qualifiers source 1..2943 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="III" gene 1..2943 /gene="npp-9" /locus_tag="CELE_F59A2.1" /db_xref="GeneID:175443" /db_xref="WormBase:WBGene00003795" CDS 14..2596 /gene="npp-9" /locus_tag="CELE_F59A2.1" /standard_name="F59A2.1a" /note="Confirmed by transcript evidence" /codon_start=1 /product="Nuclear Pore complex Protein" /protein_id="NP_001369848.1" /db_xref="EnsemblGenomes-Gn:WBGene00003795" /db_xref="EnsemblGenomes-Tr:F59A2.1a.1" /db_xref="EnsemblGenomes-Tr:F59A2.1a.2" /db_xref="EnsemblGenomes-Tr:F59A2.1a.3" /db_xref="GeneID:175443" /db_xref="GOA:Q21021" /db_xref="InterPro:IPR000156" /db_xref="InterPro:IPR001876" /db_xref="InterPro:IPR011993" /db_xref="UniProtKB/TrEMBL:Q21021" /db_xref="WormBase:WBGene00003795" /translation="MSDQKPNMGRIVASVVDVQQLMTMQFDSLIKSMDSLKIEHQTGV TQLRDDIRRSEDRFQKQLSDLSTNHGKELERLHQIIHTLLARDANPLGSMIPPQQLQQ QQQMLILQRQMEMAHVQAAQAQAHAHAQAQAQAQAQSQVMANLLNAAKPAIPVTQPLV ATTAQAKSTVPASGVIAPKTSPPEVVIPPAKPTFSTPTPAVVPKPATTGFSFGGTNPA TSIFGKKPETASPVVVPAAKDDEDEEHDEDYEPEGEFKPVIPLPDLVEVKTGEEGEQT MFCNRSKLYIYANETKEWKERGTGELKVLYNKDKKSWRVVMRRDQVLKVCANFPILGS MTIQQMKSNEKAYTWFCEDFSEDQPAHVKLSARFANVDIAGEFKTLFEKAVAEAKSSS NAGKTIDKEIKPAAEVKKEVKQEVVIPSNNKPEETGFGDQFKPKPGSWECPGCYVTCK ADEIECACCGTSKDGSVKEKNIFSKPSILQPAPGTPKVTFGFGASAPAKEPLAQTSQF GGSLSGSPSTSSSIFGGGTPKGTSVFGGGAANTPTFSFNKPAAAVNATTPSFNFNNPA ASTASPATSTTPGNSLFGGGLSKTESTASSTTTPSFMFAKNSESAFPKPTFSFGKQQT PSTTAPAKQEENKQSETPKSVFGSGFTSGGATFAALSANSAKSGSIFDAANVKKAQEE LAAQKKASIFGSKNTTLNTTSATSHDGDETNEDGDGEYEPEVEFKPVIPLPDLVEVKT GEEDEEVMFSARCKLYKYYSDLKENKERGLGDIKLLKSNDNKYRIVMRREQVHKLCAN FRIEKSMKLSPKPNLPNVLTFMCQDFSEDASNADPAIFTAKFKDEATAGAFKTAVQDA QSKM" ORIGIN 1 ctctcctttc gcaatgagcg atcagaagcc gaatatgggg cgcattgtcg ccagcgtcgt 61 ggatgtgcag cagttgatga caatgcagtt tgactcgctt atcaaaagca tggactcgtt 121 gaagattgag caccagaccg gcgtcaccca gcttcgcgat gatattcgtc gatccgagga 181 tcggtttcag aagcagttgt ccgatttgag cactaatcac ggaaaagagc tcgagagact 241 tcatcaaatt atacacactc ttcttgctcg tgatgcgaat cctctcggct caatgattcc 301 tccacagcag cttcagcaac aacagcaaat gttgattctt cagcgacaaa tggagatggc 361 tcatgtgcag gcagcacaag ctcaagctca tgctcacgct caagctcaag cccaagcaca 421 ggcccaaagc caagttatgg ctaatttgct caatgctgcg aagccagcta ttcccgttac 481 acagccactg gtcgccacta cagcacaagc aaaatcgaca gttccagctt ctggagttat 541 tgcaccaaag acatctccac cagaagttgt aattccacct gctaagccaa cattctctac 601 tccaacgcct gcagttgttc caaagccagc caccaccgga ttctcattcg gcgggaccaa 661 tccagctact tcaatcttcg gtaaaaagcc tgaaactgct tccccagtcg tggttccagc 721 agctaaagat gatgaagacg aagaacatga tgaggattac gagccagagg gcgagttcaa 781 gccagtcatt ccactgccag atcttgtcga ggtgaaaact ggagaagaag gagagcaaac 841 catgttctgc aatcgttcaa aactctacat ttatgccaac gagacgaagg aatggaagga 901 gcgaggaacc ggcgagctga aggttctcta caacaaggac aagaagtcgt ggagagttgt 961 tatgcgacga gaccaggttc tcaaagtctg tgccaatttc ccaattctcg gctcgatgac 1021 cattcaacaa atgaaatcca acgagaaggc ctacacatgg ttctgcgagg acttttccga 1081 agatcagcca gctcacgtga agctttccgc tcgtttcgct aacgtcgata tcgctggaga 1141 gtttaagact ttgttcgaga aggctgtcgc tgaggcaaaa tcatcgagca acgctggaaa 1201 gaccatcgac aaggaaatca agccggcggc tgaggtgaag aaggaagtca agcaagaagt 1261 tgtgattcca tcaaacaaca aaccggaaga gactggattt ggagatcagt tcaagccaaa 1321 accaggatct tgggaatgcc ctggatgcta tgttacttgc aaagctgacg agattgaatg 1381 tgcctgttgt gggacatcga aagacggatc tgtcaaagag aaaaatatat tctctaaacc 1441 ttcgatcctc cagcctgccc caggaactcc aaaagtgaca ttcggattcg gagcatctgc 1501 tccagccaag gaacctcttg ctcaaacatc tcagttcggt ggatcactca gcggatctcc 1561 aagcactagc agtagcattt tcggtggtgg aacaccaaag ggaacaagcg ttttcggtgg 1621 aggtgctgct aatactccaa ctttctcatt caacaagcca gctgccgctg tcaatgcaac 1681 taccccatcg ttcaatttca acaatcctgc agcttcaact gcttctccgg caacctctac 1741 gactccagga aattcattgt tcggaggtgg actctccaag actgaatcta cagcttcttc 1801 aactactact ccgtcgttta tgttcgccaa gaattctgaa agtgccttcc caaagccaac 1861 tttctcattc ggaaagcaac agactccatc aacgactgca ccagctaaac aagaagaaaa 1921 taaacagtcc gagacgccaa aatccgtgtt cggtagtgga ttcacgtctg gaggtgcaac 1981 attcgctgcc ctttcagcca actctgccaa atctggctcc attttcgacg cagcaaatgt 2041 caagaaggcc caagaagaac ttgctgctca gaagaaggca agcattttcg ggagcaagaa 2101 caccacgttg aacacgactt ctgcaacttc acacgatggt gatgagacga atgaggatgg 2161 agatggggag tatgagccag aagtcgagtt taagccagtt attcctcttc cggatttggt 2221 tgaggtgaaa actggtgaag aggacgagga ggtcatgttc tccgccagat gcaagcttta 2281 taagtactat tcggatctca aggagaataa ggaacgtgga ctcggagata ttaagctcct 2341 gaaaagcaat gacaacaaat atcgaatcgt gatgcgtcgt gagcaagtcc ataagctctg 2401 tgccaatttc cgtatcgaaa agtcgatgaa gctcagtccg aagccaaact tgccaaatgt 2461 gctcacattt atgtgccagg acttctcaga agacgcctcc aacgctgatc cagccatctt 2521 caccgccaaa ttcaaggacg aggcgaccgc cggagcattc aagacggctg ttcaggatgc 2581 tcaatcgaag atgtaatcct ctgctgatta tttaaattat tttattattg ttattcctcc 2641 ccacccagca ctctgtgtta gtattcccca ccaccaattt tatttatgaa cctagtttta 2701 ttcatcccca tctgctgtca tctatagtcc tttaagtgta gtttatattt gtctggtaag 2761 gtttttaaaa aaataatttc cttatttccc ccccatctct ctcaaaatcc cattgttctc 2821 ataagtaccc cccacacact atcattcata atttttgtct ttaaaactta actatattgt 2881 tcacattgtc ccggcatcga tttttcccca ctggtgacaa tccaataaat tgtgaatgca 2941 ttg //