Dbfetch
LOCUS NM_001351888 4566 bp mRNA linear INV 09-APR-2019 DEFINITION Caenorhabditis elegans FERM domain (protein4.1-ezrin-radixin-moesin) family (frm-9), partial mRNA. ACCESSION NM_001351888 VERSION NM_001351888.1 DBLINK BioProject: PRJNA158 BioSample: SAMEA3138177 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 4566) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 4566) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (09-APR-2019) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4566) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (16-JAN-2019) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 4566) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..4566 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="X" gene <1..>4566 /gene="frm-9" /locus_tag="CELE_F31B12.3" /db_xref="GeneID:266949" /db_xref="WormBase:WBGene00001495" CDS 1..4566 /gene="frm-9" /locus_tag="CELE_F31B12.3" /standard_name="F31B12.3j" /note="Product from WormBase gene class frm; Partially confirmed by transcript evidence" /codon_start=1 /product="FERM domain (protein4.1-ezrin-radixin-moesin) family" /protein_id="NP_001338848.1" /db_xref="GeneID:266949" /db_xref="InterPro:IPR002110" /db_xref="InterPro:IPR019748" /db_xref="InterPro:IPR019749" /db_xref="InterPro:IPR020683" /db_xref="InterPro:IPR036770" /db_xref="UniProtKB/TrEMBL:A0A1X7RBV0" /db_xref="WormBase:WBGene00001495" /translation="MRERDDRKPSVTQNLSEIMLEAIHYEDVNLVERLLTAHSSKQPM STSPSIGSTNTLTDLAQRRHGAGAHRRSNASSTVSTHSGGRSTCAMMNTLHMAVAHKQ RDIVELLLKNGYDPNTPASCHCKGNCTATGNIPLTSIIPRTHSMTPELCSTCSQLRVV SIVDQTPLGVAVRSQSSELIALLIAYGGDVNLGDEDGNTPLMLAVRESPLSWPCLHTL IFFGAQIEQKNMRGICPLDLAPELKKLQQTCVEELFKNACSGDCEPPSRSTPGPSAKN WNRLQVDNVSQGERSLSKAPLSPKPSAAASVSTCSMLETSSAKECARRKSLVSLQLHR KSRNVKEYPVIDCVSWEQAWELLKKMACNPECLDNIVNSLSKFATQMENTPSSVDRDQ FDAHMGGLLHKMIHTAIEEYESSTPTYKKQKKLHLTWLLSQIATFCFTFLQKSGTSRQ FSALNTLNKIIDAGLVHDLFAFNDVVFHSSRILNRCHAFDSDEPPTPSGESFNSNADQ NSTVDHVFIYGAGYKDQSLLPSPTVAPTRHKSDLMNSFSEMDPSQVIVALHNAITMQN REVGSRSVCSPAHRWRQCCAHCTQILVARLLLFLTHAKKFRSRLSERHQLRSLVALLE PTLEPQLLCLLLQVLALIALDPSTHTTLIDIQIDDVLIQMLLPADDWYYTNHSTKYGT FVKYHAARVLVYVGMGDRVGSRVNLFNMMTFEPSAKSGSQQNEDDYICETCATPRSRS TFSRSAVSVEGVLLKVLAEVAELVRQSQHLSASEPITEESPSAGSPPAVLPNQAEQKS INEKNAEKLTQLGCQILISLEQLEAHLCKLGLVLDSVLLLRLLLHKLSWDLGLVTKKR VAVVDHVYKPITDPRAHSSCSLGNNRNFGKSKSFDRREDSKRDKNYLRVDQGSRASKR VHIRRSSSVEIIRPKRLSSGAKDIKNRERRKRLGTDTSSGSNRSKKTNSSSSSVQKHL PKYIQSLFRSRMGTDPCKRTSRRDSNESNTSGSDAVLEFTRKLQNYPLTRREAQRLTY RSNGQQDSNDSKMGPRTLGYVYLPELEIQGASPPRSPGPLTGNSLEEGTTMLLDTRRP SSPQAIPGLPLIEIRRPSALSQFEFGYFVNSPELSGSEVSDCAPLLLSGQIGGSRKSS DETSLGGWSSRASSVMSQRSSRSSVGLRLSTFSGGTSIASDNSGPFLFSFVLRKRAST IGTRIPIPRRALSRSSGDSLRVPDRESPLHLASMTEMNPDFQCVRQLILNLLNVYTKR NDNVVSTMKECADVLRQILNSPQHPTVKNWCAEIIHVVSTHVEEEEPTTAENNEQIND EYLEFQDQVISGSLPCPKEEAAYLASIQLSVEEQWPSNKRTQTIRRHLLKGQFGRIRD LAQKIMVTPWEVDQNLYCTPPRFPNESANASRAQSVVEEIQHRSRTPTLLRCITNTDG LMSEEMQAQCLPVDLRGDRRTIKLVKERKRKLFHSQVYESEIGMKKLYIQTAKKLAAF GCKVFQVKELLHGRTLRKVSFSSSVWF" ORIGIN 1 atgcgggaac gggatgaccg caaaccatca gttacccaga acttgtcaga aataatgctc 61 gaggcaatac attatgaaga tgtgaacttg gtggaaaggt tgctcactgc gcatagttca 121 aaacaaccaa tgtcaacatc tccgtcaatt ggtagcacaa acacattgac ggatcttgct 181 caacgtagac acggtgcggg ggcacaccga cgttccaatg ccagtagtac ggtgtccaca 241 cattccggag gaagatccac gtgtgctatg atgaacacgt tgcacatggc tgtggctcat 301 aaacaacgag atatagtgga acttttgctt aaaaacggct acgatcccaa tactcccgca 361 tcgtgtcact gtaagggaaa ttgcacggcg actgggaata ttccactgac ttcgatcatt 421 ccgagaactc attcaatgac gccagaattg tgttcgacgt gctctcaact gagggttgtg 481 tcaatcgtgg atcaaacacc gcttggtgtg gcagtcagat cacagtccag cgaattgata 541 gcattgttga ttgcctacgg aggagatgtt aatttaggtg atgaagatgg caacacgccg 601 ttgatgctag ccgtacgaga atcacctctg tcttggcctt gcctgcacac gctcattttc 661 tttggagctc aaattgaaca aaagaacatg cgcggaatat gccctcttga tcttgctcca 721 gagctgaaga aacttcaaca aacttgcgtt gaagagcttt tcaaaaatgc gtgctcgggt 781 gattgtgaac caccatctcg atctacaccg ggaccatcag ccaaaaactg gaatagacta 841 caagttgaca atgtttccca aggagaacga tcactgtcaa aagctccatt gagcccaaaa 901 ccgtctgctg cagcaagtgt ctcaacgtgt agcatgctgg aaacctcatc agcaaaagaa 961 tgtgcacgac gaaaatcatt ggtgtcgctt caacttcaca gaaaaagccg aaacgtgaaa 1021 gaatatcctg taattgactg cgtcagttgg gaacaagcat gggaattgct gaagaagatg 1081 gcatgtaatc cagaatgtct agataacatc gtgaattcat tgtcaaaatt tgcaacccaa 1141 atggagaaca ccccgtcaag cgttgatcgt gatcaattcg atgcacacat gggtggccta 1201 ctacataaaa tgattcatac agcgattgag gagtacgagt cttcgacacc aacctacaaa 1261 aagcagaaga aactccatct cacctggctg ctcagccaaa ttgccacgtt ttgttttaca 1321 tttctgcaga aaagtggaac gagccgacaa ttctcagcac tgaacacgtt gaataaaatt 1381 attgatgctg gtttagtaca tgatttgttc gcattcaacg acgttgtctt tcattcttca 1441 agaattttga accgatgcca tgcatttgat tccgacgaac caccaactcc atctggcgaa 1501 tctttcaact caaatgcaga ccaaaactca actgtcgatc atgttttcat ttacggagct 1561 ggctataaag accaatcgtt attaccttct cctacggtgg caccaactcg acacaagtcc 1621 gacttaatga attctttcag cgaaatggat ccaagccagg tcattgtggc cttgcacaac 1681 gcgataacaa tgcaaaaccg ggaagtaggg tcaagatctg tttgtagtcc ggctcatcga 1741 tggaggcagt gttgtgctca ttgtacacag atattggtgg ccagattatt gctattctta 1801 acacacgcaa aaaaatttcg aagtcggttg tctgaacgac atcagctcag aagcttggta 1861 gctttgttag aaccaacttt ggaacctcaa ctcttatgtc ttttacttca agttctagct 1921 cttatagcgt tagatccatc tacccacaca actttgatag acattcaaat tgacgacgtc 1981 ttgattcaaa tgctactccc agcagatgat tggtactaca ctaatcacag cactaaatat 2041 ggaacttttg taaagtacca tgctgctaga gttttagtgt acgttggaat gggtgatcga 2101 gtaggaagtc gagtcaatct gttcaacatg atgacgtttg agccatctgc aaaaagcggg 2161 agtcaacaaa acgaggacga ctacatttgt gagacatgtg ccacaccgcg cagccgaagt 2221 acattttcaa gatcagcagt ttcagtggaa ggtgttctgt taaaagtgtt ggcagaagtt 2281 gctgagcttg tacgtcagag tcaacaccta tcagcaagtg aaccaataac tgaagaatcg 2341 cccagtgcag gatctccacc cgctgtccta ccaaatcagg ctgaacagaa aagtattaac 2401 gaaaaaaatg cagagaaact tacacaactt gggtgccaaa ttttgatctc attggaacaa 2461 cttgaagctc atttatgcaa acttggactg gtacttgatt cggttctact tctccgtcta 2521 cttcttcata agttgtcatg ggatcttgga ttagtcacaa aaaagagggt tgctgtggtg 2581 gatcatgttt acaaaccaat cacggatccg agagctcatt ctagctgcag tcttggaaac 2641 aacagaaact ttggtaaatc taaatctttt gataggcgag aagatagcaa acgggacaaa 2701 aattacttgc gtgttgatca gggatctcgt gcgtcaaaga gagtgcatat cagacgatct 2761 agttcagtag agattatcag gccaaaacga ctcagttccg gagcaaaaga tatcaaaaat 2821 cgagaacgga ggaaaaggct gggaacagat acaagtagcg ggtcgaatcg ttccaagaaa 2881 accaactcct cgtcttcatc tgttcagaaa cacttgccaa aatacattca atcattattc 2941 cgaagtcgga tgggaactga tccatgcaag aggacatcga gaagagactc taatgagagt 3001 aatacaagtg gaagtgatgc tgttcttgag ttcacaagaa aacttcaaaa ttatccgttg 3061 acgagacgcg aagcgcaaag attgacgtat cgaagcaatg ggcaacaaga ttcaaatgac 3121 tcgaagatgg gaccacgaac tttaggatac gtttacctcc cagaactaga aattcaaggt 3181 gcaagtccgc caagatcacc gggacctcta actggaaact cgttagaaga aggaaccaca 3241 atgcttttgg acacaagacg gccgagcagc ccacaagcaa tccccggcct tcctttaatt 3301 gaaattcgtc ggccctcagc tctctctcaa tttgaatttg gatactttgt aaactcacca 3361 gaattatcag gaagtgaagt atctgattgt gccccattac ttctcagtgg tcaaattggt 3421 ggaagccgaa aaagctccga cgaaacatca ttgggaggat ggtccagccg tgcttcatcg 3481 gtaatgagtc aaaggtcgtc cagatccagt gttggcttga ggttatcaac attttctgga 3541 gggacgagta ttgcttcgga taactctggg ccatttttgt tcagttttgt tttgagaaaa 3601 cgtgcatcta ctataggaac tagaatacca atacctagga gagctttgtc aagatcttca 3661 ggagacagtc tgagagtacc tgatagagaa agtccacttc atttagcaag tatgacagag 3721 atgaatccgg attttcaatg tgttcgacag ctcatcttga accttttgaa tgtttacacg 3781 aaaagaaatg acaatgtggt ttctacaatg aaggaatgtg cggatgttct tcgtcaaatc 3841 ctaaactctc ctcaacatcc aactgtcaag aattggtgtg ccgaaataat tcatgtagtc 3901 agtactcatg tagaagaaga ggaaccaacg acggcagaaa ataatgaaca aattaatgac 3961 gagtatctgg aatttcaaga ccaagtgata tcaggaagtt taccatgccc gaaggaagag 4021 gctgcatacc ttgcaagtat tcagttatca gttgaagagc agtggccgag taataaaagg 4081 acccagacaa ttagaagaca tttattgaaa ggacagtttg gtcgaatccg ggatctcgcc 4141 caaaagatca tggtgactcc atgggaagtt gatcaaaact tgtactgcac accacccaga 4201 tttcccaatg aatcggcaaa tgctagtaga gcacaatcag tggttgagga aattcagcac 4261 agatcaagaa ctccaactct tctgcgatgt atcacaaaca cagacggctt aatgtcagaa 4321 gagatgcaag ctcagtgcct tcccgtcgat ctacgtggtg atcgtagaac tatcaagctg 4381 gtcaaggaga ggaagcgaaa attgttccat agtcaagtct atgaaagtga aattggcatg 4441 aagaaattgt acattcagac cgccaaaaaa ctagccgcat ttggttgtaa ggtttttcaa 4501 gttaaagagt tgcttcacgg acgaacactc agaaaagtga gtttttcttc ttctgtttgg 4561 ttttga //