Dbfetch
LOCUS NM_001313637 5499 bp mRNA linear INV 21-JAN-2020 DEFINITION Caenorhabditis elegans C2H2-type domain-containing protein (sea-2), partial mRNA. ACCESSION NM_001313637 VERSION NM_001313637.2 DBLINK BioProject: PRJNA158 BioSample: SAMEA3138177 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 5499) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 5499) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (21-JAN-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5499) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (04-DEC-2019) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 5499) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Sep 4, 2019 this sequence version replaced NM_001313637.1. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..5499 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="II" gene <1..5499 /gene="sea-2" /locus_tag="CELE_K10G6.3" /db_xref="GeneID:173738" /db_xref="WormBase:WBGene00004751" CDS 1..4515 /gene="sea-2" /locus_tag="CELE_K10G6.3" /standard_name="K10G6.3l" /note="Confirmed by transcript evidence" /codon_start=1 /product="C2H2-type domain-containing protein" /protein_id="NP_001300566.1" /db_xref="EnsemblGenomes-Gn:WBGene00004751" /db_xref="EnsemblGenomes-Tr:K10G6.3l" /db_xref="GeneID:173738" /db_xref="GOA:A0A0K3AUM9" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR036236" /db_xref="UniProtKB/TrEMBL:A0A0K3AUM9" /db_xref="WormBase:WBGene00004751" /translation="MTSMYGGNDYDQHQLHHQNQQHQASTSTQQFHHPQRPPPPQYDQ PSSSTGSSLPPLHTVRYEQLPPPPSNQRTPTQQLQYPVKVVEAGGQAYAQQVQQAQQS NRSGAAGVNSALQPKPLPPLSSITSISSSAAGSSISAPSTSQPSTTSSLITSPPSTSS SSMAPRKTPPNASSSSLIKRQSQDVQEQQRVDFEVARNVSQIMSKNGLKVMHEPLLTG SLPQLAPLAPLPPPKSGVYQCPNCNRNLANARNLQRHRQTCGSAQHAAPQLAAMLQRS PPPCASAPPVAPPTAPSTSFQHHNSTGNLTLSYSSSSSRHQSSLYSPQLEHQDLVGNP NVMLSDGYEYKDDPMLYQGPSGLSDSIWSRDDSFHSEPPSASHDQLDMDHLGFPDPLQ DPLHHLDSFDSADHRKETPRECHEPDELMTLDPTPPQCGSERFYGINIDDMPLSLDCD EPLMRSESASLSSSSQGRNTPAAVFTCEACKKSVSSERSLRRHYNTCKMFQTELAASG EETVSNSTTTTTTATTTSSKSTGNPLFTCEHCARQLCSMSNLKRHRATCKVAASSSSN SAASRPPSQPSTPATAPATPMLQASQAPQPLQAPPQSPMETTATVTYTKTTVPPSVAN TWNTEKAQLISPKPRSQTIFSEASSSMTVGDALRAQQHQQKMDQQIQIQFQQQQQQRF QHHQQQQQAGRIPPRPPNPILNQVQNPPQQVQHNQHQNQMLNPIRQPLLQSPPPPPPK KGLIEHKNTDLVLITSEPLAERMDAKRRSSEGLVAVTSTPLPPIQLPQRSQAPAPSRQ QQQQPPVAYQVQFNGRPLPPMQLPPLQNPHNQQQQHQMLHQSQMNYQQVQQVQQVQHV QQQQNLQNQHHHQQQHHQQNQQQAPGNRSRSHSNVGKMEQEAQRQGSPLDSIITSVPL SIEVHHHIMKPGPLEQGQSSVDSQSTAEPSPRKASQQAYICPECKKTYASRKNVKRHR MAVHKLTLDEILANPEQPALDPLSAVGGAGRRHTVAGLETPDSALKPAPTKRKASEAP SAGVATKKGKAMAASVDEIQVKEEEEDQKEETVGSVERQEPPKKPVADDHKSAIAPLP PANTIMPPPPPYNQASAVPLNPPRTALPPLQLPPLQPLQSESPSWASMSAPPTALIPR TPRSSEFADEEDTRAMAKIAAELKRSAEDWPVLAVIEGVAAEPTNGEDIDEDEILIKR LRQGGVLEDVGDVSDLLRDVQGGVDGEPFSEDMLLEKNLSTASSVGLPSLASPGEQFG YQQYSQHPQQHPQQHPQQHPQQQQQVWNPNYEFQGYMQQQHPPMPVSQQFQQPLLQRP ASQPPPARPIVKNSRRPSTTPKPPPNLTCSGCKKILGSDYSLRRHRAGCADVQQALNP EYPRPPKRKAAREAQKINEAEILASMPDPQMVAERSAAVAEAAAAEAAVERIGALPPP SVVHEIVHQVNADRQSMKKHNKTTSPPPAQEAPPTCAPDDPMSSSSSSSTSSASPLQG VSGMRQELLQ" ORIGIN 1 atgacatcaa tgtatggagg aaatgattat gatcagcacc agctgcacca tcagaaccag 61 cagcatcaag catccacgtc gactcagcag tttcatcatc cacaaagacc gccaccacct 121 cagtacgatc agccatcatc ttcaacagga tcctcactgc cacctcttca tactgtacga 181 tatgaacagt taccaccacc accatcgaat cagaggaccc caactcagca gctacagtac 241 cctgtgaagg tggtcgaggc aggcggtcag gcgtatgctc agcaggttca gcaggctcag 301 cagtcgaatc ggagtggagc cgccggtgtt aacagtgctc tacaaccgaa acccctacca 361 ccattgtcat ctataacatc aatatcatcg tcagcagcag gatcctcaat atctgctcct 421 tcaacgtctc aacctagtac cacctcatca ctaatcacat caccaccgtc cacgtcttca 481 tcttcaatgg cgcctcgaaa aacgcctccc aacgcctcct cgtcgtctct gataaaacga 541 caatctcagg atgttcagga gcagcagcga gtggattttg aagtggctcg gaacgtgtcg 601 caaatcatgt cgaaaaacgg gctgaaagtg atgcacgagc cgctgctcac cggatctctt 661 cctcagttgg ctccgttggc tccactgcca ccgccaaagt ctggagtcta tcagtgcccg 721 aattgcaatc ggaatctggc caatgctcgg aatttgcaaa ggcatcggca aacttgtgga 781 tcggctcagc acgcggctcc acagctcgcc gcgatgctcc aacggagccc cccgccgtgt 841 gcatcggctc ctccggtcgc tcctccgacg gcaccgtcga caagcttcca gcatcacaat 901 tcgactggga atctcacgct ttcctacagc tccagtagca gtagacatca gagctcactc 961 tactcaccac agctggagca tcaggatcta gttggaaatc cgaatgtgat gctctccgac 1021 ggctacgagt acaaggacga tccgatgctc taccagggac cttcaggcct ttcggatagc 1081 atttggtctc gagacgatag ttttcattcg gagcccccgt cggcgtctca cgatcagctc 1141 gatatggatc atcttggatt ccccgacccc ctccaggatc ctcttcacca cctcgactcg 1201 tttgattcgg cggaccatcg gaaggaaaca ccgcgggagt gtcatgagcc cgatgagctg 1261 atgacgttag atccgacgcc gccacagtgt ggatcggaac gattctatgg gattaatatt 1321 gacgatatgc cgttgtcact ggattgtgat gagccgctga tgagatcgga gtcggcgtcg 1381 ttgtcgtcga gttctcaggg gaggaatacg ccggctgctg tttttacgtg tgaagcatgc 1441 aaaaaatcgg tatcatccga acgatcgctt cgtcgtcact acaacacttg caagatgttt 1501 cagacggaat tggcagcttc tggtgaagaa actgtctcga atagcacaac aacgacaaca 1561 acagcgacca ccacctcctc aaaatccacc ggaaatccgc tcttcacttg tgagcactgt 1621 gctcgtcagc tgtgctctat gagcaatctg aagcgtcatc gtgccacatg caaggtcgct 1681 gcctcgtcct cgtcgaattc cgccgcttca cgtccaccat cgcagccatc tacgccggct 1741 acagcgccag cgactccgat gcttcaggcg tcacaggctc cccagcctct ccaagctcca 1801 ccacaatcac caatggagac caccgcgaca gtcacctaca ccaaaactac tgtgccacca 1861 agcgttgcta atacctggaa cactgaaaag gctcagctga tctccccgaa gcctagaagc 1921 cagacgatct tttccgaagc ttcttcttcg atgaccgtcg gcgacgctct ccgggctcag 1981 cagcaccagc agaaaatgga tcaacaaatt cagattcagt tccagcagca gcagcaacag 2041 agattccaac atcatcagca gcagcaacaa gcgggtcgga tcccaccacg gccacccaat 2101 ccgattttga atcaagttca gaacccgcct cagcaagtgc aacacaatca gcatcagaat 2161 cagatgctga atccgattcg gcagccgctg cttcaaagtc cgccaccacc accaccaaag 2221 aaaggactta tcgagcataa gaacactgat cttgtgctga ttacgtcgga gccgctggcc 2281 gagagaatgg atgctaagcg aagatcttca gaaggcctgg tggctgtcac atcgacaccg 2341 cttccgccga tacaactgcc tcagagatct caggcgccag caccgtcaag gcagcagcag 2401 caacagcccc cggtcgccta ccaagtgcag ttcaatggtc gaccacttcc gccgatgcag 2461 ctcccgccgc ttcagaatcc acacaatcaa cagcagcaac atcagatgct tcatcagtca 2521 cagatgaact atcagcaggt tcagcaggtt cagcaggttc agcatgttca gcagcagcag 2581 aatcttcaaa accagcacca ccaccagcag caacatcatc agcagaatca gcagcaagcc 2641 cctggaaatc gaagcagatc gcacagcaat gtcggcaaga tggagcaaga agctcagcga 2701 caaggttccc cgctcgactc gatcatcacg tccgtgcctc tatccatcga agttcaccat 2761 cacatcatga agccaggacc gctggagcaa ggccaaagca gtgttgactc tcagtccact 2821 gctgagccaa gtccgcggaa ggctagccag caggcctaca tttgtccgga atgcaaaaag 2881 acgtatgcga gccggaagaa tgtgaagcgc caccggatgg ctgttcacaa gctgacactt 2941 gatgagatcc tcgcgaatcc ggaacaacca gcgttggatc ctctatcggc tgtaggtgga 3001 gctggacggc gtcatacggt cgctggactt gagacaccgg acagtgcgct gaaaccggcg 3061 ccgacaaaac gcaaagcttc ggaggcaccc agcgccggtg tagctacgaa gaagggaaaa 3121 gcgatggcgg cttctgttga tgaaatccaa gtgaaagaag aagaagaaga tcagaaggaa 3181 gaaacggtgg gatccgtgga gcgtcaggag ccgccaaaga agccagttgc cgatgatcac 3241 aagtcggcga tagctccact tccgccagca aatacgatca tgccaccacc accgccgtac 3301 aatcaagcgt ccgcggtgcc gctgaatccg cctagaacag ctcttccgcc tcttcaactc 3361 ccaccactgc agccacttca gtcagagtcg ccatcctggg cgtcgatgtc ggccccgccg 3421 actgctctga tcccaagaac accaagaagc agcgagtttg ccgacgagga agacactcga 3481 gcaatggcga aaatcgccgc tgagctgaag cgatccgccg aggattggcc ggtacttgca 3541 gtcattgaag gagtcgccgc tgagccgacg aacggggaag acatcgatga agatgagatt 3601 ctgatcaaga ggctgagaca aggaggcgta ctcgaggacg tcggggatgt ttcggatttg 3661 ttgagggatg ttcaaggagg tgtcgatgga gaaccattct cggaggacat gcttcttgag 3721 aagaaccttt ccacggcttc cagtgttggg cttccatcgc tagcatcgcc gggggagcag 3781 tttgggtatc agcagtattc acagcatcct cagcaacatc ctcagcaaca tcctcagcag 3841 catcctcagc agcagcaaca agtctggaat ccgaattatg aattccaagg ttacatgcag 3901 cagcagcatc caccgatgcc agtttctcag caattccagc agccgttgct tcaacgcccg 3961 gcttctcagc cgccaccagc tcgacccatc gtgaagaact cccgccgccc gtcgacaact 4021 ccgaagcctc caccgaatct cacttgctct ggatgcaaaa agatcctggg atccgactac 4081 tcgcttcgtc gtcatcgtgc cggatgcgcc gacgttcagc aggctttgaa cccggagtac 4141 ccaaggccgc cgaagcggaa agccgctcgg gaagcgcaga agatcaacga ggcggagatt 4201 ctcgcgtcga tgccggatcc acagatggtt gctgaacgaa gtgctgctgt ggcagaggcc 4261 gctgcggcag aggctgctgt tgaaaggatc ggagcactgc cgccaccgtc ggttgttcat 4321 gagattgtgc atcaagtgaa tgcggatcgg cagtcgatga aaaaacacaa caaaacgaca 4381 tctccaccac cagctcaaga agcccctccc acatgtgctc cagacgatcc gatgtcgtca 4441 tcatcatcat catccacgtc atctgcatct cctctacaag gagtttccgg aatgcggcaa 4501 gaacttctcc agtgaatgga atttggctcg tcacactcgt gaatcgtgta aaatgacgac 4561 acgggcgcat tcttatgagc caacatcagc ggctgacaaa atcgacctaa tattcatgga 4621 taagtcaaaa cgacgcgtct ctcgaacctt cctgtgcacc gtctcatcac tcatctcgta 4681 ttggctcggc gagcaaggcg atcggctcga gctcgacacg aaatgggagc attttcagct 4741 gttgctggat gtgcatacgc tcaaagttgc catcacagcc gacaatataa atctgattgc 4801 tgagcaatcg aaaaaatatc aactggaaca tgtgattcgg atggccgacc agtttatgat 4861 gaatacgaac tacaccacac caccgacaca tgttcaactc tagattatcc ccaatttttt 4921 ttacctaatt tatcatttct tttatcacat tttcccaatt tgtaccccat tgcaaacaag 4981 cccctatcaa atcaaatcac actgaccccc gaattgcctt tctactgaat tcgtttattt 5041 ttgcgtgttt tttctcccga aaaataattt aatgtatttt ctcattgttt tatatacccc 5101 agttcacgtg aatgtatgtc atttaatttt tgaatgtttt tcaaatcccc gcccgcccgt 5161 cgaaaatcta aaaaggatac tctaatacac attttttgtg cagcgattta caaaacaaat 5221 gggtcgattt ttctcgaatt ttttccccca attctctgat attgtgattg atctctttct 5281 tccccccctt ttcatacccc ccactcgcta gtttcagatg cgttattata ggtacgaagc 5341 ctctctcatc ccggacgccc acctctcctt acctttagaa tccaatatgt gtcgatgact 5401 ttgatctctt ttctctcttt ctctctctgt tttataacgt gattttcttc ttttttatta 5461 atgctttctt ccatttttct ataaatttat taatgtaaa //