Dbfetch
LOCUS NM_001313635 5739 bp mRNA linear INV 21-JAN-2020 DEFINITION Caenorhabditis elegans C2H2-type domain-containing protein (sea-2), partial mRNA. ACCESSION NM_001313635 VERSION NM_001313635.2 DBLINK BioProject: PRJNA158 BioSample: SAMEA3138177 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 5739) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 5739) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (21-JAN-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5739) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (04-DEC-2019) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 5739) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Sep 4, 2019 this sequence version replaced NM_001313635.1. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..5739 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="II" gene <1..5739 /gene="sea-2" /locus_tag="CELE_K10G6.3" /db_xref="GeneID:173738" /db_xref="WormBase:WBGene00004751" CDS 1..4755 /gene="sea-2" /locus_tag="CELE_K10G6.3" /standard_name="K10G6.3j" /note="Confirmed by transcript evidence" /codon_start=1 /product="C2H2-type domain-containing protein" /protein_id="NP_001300564.1" /db_xref="EnsemblGenomes-Gn:WBGene00004751" /db_xref="EnsemblGenomes-Tr:K10G6.3h" /db_xref="EnsemblGenomes-Tr:K10G6.3j" /db_xref="GeneID:173738" /db_xref="GOA:A0A0K3AU01" /db_xref="InterPro:IPR013087" /db_xref="InterPro:IPR036236" /db_xref="UniProtKB/TrEMBL:A0A0K3AU01" /db_xref="WormBase:WBGene00004751" /translation="MEGHSSLASYSHHHPSSSHHHHPGQQQSSSSSSSSHLQDFQSPP SASHPYYHQQQPQHQHQQAQQYGQATGSTNGGGQQQMTSMYGGNDYDQHQLHHQNQQH QASTSTQQFHHPQRPPPPQYDQPSSSTGSSLPPLHTVRYEQLPPPPSNQRTPTQQLQY PVKVVEAGGQAYAQQVQQAQQSNRSGAAGVNSALQPKPLPPLSSITSISSSAAGSSIS APSTSQPSTTSSLITSPPSTSSSSMAPRKTPPNASSSSLIKRQSQDVQEQQRVDFEVA RNVSQIMSKNGLKVMHEPLLTGSLPQLAPLAPLPPPKSGVYQCPNCNRNLANARNLQR HRQTCGSAQHAAPQLAAMLQRSPPPCASAPPVAPPTAPSTSFQHHNSTGNLTLSYSSS SSRHQSSLYSPQLEHQDLVGNPNVMLSDGYEYKDDPMLYQGPSGLSDSIWSRDDSFHS EPPSASHDQLDMDHLGFPDPLQDPLHHLDSFDSADHRKETPRECHEPDELMTLDPTPP QCGSERFYGINIDDMPLSLDCDEPLMRSESASLSSSSQGRNTPAAVFTCEACKKSVSS ERSLRRHYNTCKMFQTELAASGEETVSNSTTTTTTATTTSSKSTGNPLFTCEHCARQL CSMSNLKRHRATCKVAASSSSNSAASRPPSQPSTPATAPATPMLQASQAPQPLQAPPQ SPMETTATVTYTKTTVPPSVANTWNTEKAQLISPKPRSQTIFSEASSSMTVGDALRAQ QHQQKMDQQIQIQFQQQQQQRFQHHQQQQQAGRIPPRPPNPILNQVQNPPQQVQHNQH QNQMLNPIRQPLLQSPPPPPPKKGLIEHKNTDLVLITSEPLAERMDAKRRSSEGLVAV TSTPLPPIQLPQRSQAPAPSRQQQQQPPVAYQVQFNGRPLPPMQLPPLQNPHNQQQQH QMLHQSQMNYQQVQQVQQVQHVQQQQNLQNQHHHQQQHHQQNQQQAPGNRSRSHSNVG KMEQEAQRQGSPLDSIITSVPLSIEVHHHIMKPGPLEQGQSSVDSQSTAEPSPRKASQ QAYICPECKKTYASRKNVKRHRMAVHKLTLDEILANPEQPALDPLSAVGGAGRRHTVA GLETPDSALKPAPTKRKASEAPSAGVATKKGKAMAASVDEIQVKEEEEDQKEETVGSV ERQEPPKKPVADDHKSAIAPLPPANTIMPPPPPYNQASAVPLNPPRTALPPLQLPPLQ PLQSESPSWASMSAPPTALIPRTPRSSEFADEEDTRAMAKIAAELKRSAEDWPVLAVI EGVAAEPTNGEDIDEDEILIKRLRQGGVLEDVGDVSDLLRDVQGGVDGEPFSEDMLLE KNLSTASSVGLPSLASPGEQFGYQQYSQHPQQHPQQHPQQHPQQQQQVWNPNYEFQGY MQQQHPPMPVSQQFQQPLLQRPASQPPPARPIVKNSRRPSTTPKPPPNLTCSGCKKIL GSDYSLRRHRAGCADVQQALNPEYPRPPKRKAAREAQKINEAEILASMPDPQMVAERS AAVAEAAAAEAAVERIGALPPPSVVHEIVHQVNADRQSMKKHNKTTSPPPAQEAPPTC APDDPMSSSSSSSTSSASPLQGVSGMRQELLQ" ORIGIN 1 atggagggac actcctccct cgcctcgtat tcacatcatc atccgtcgtc gtcgcatcat 61 catcatcctg gacagcagca gagctcgtca agttccagct catcacatct tcaggatttt 121 caaagtcctc cgtctgccag tcatccatac taccatcagc agcagcctca gcatcagcat 181 cagcaggctc agcaatatgg tcaagcaacg ggcagcacga atggaggagg acagcaacag 241 atgacatcaa tgtatggagg aaatgattat gatcagcacc agctgcacca tcagaaccag 301 cagcatcaag catccacgtc gactcagcag tttcatcatc cacaaagacc gccaccacct 361 cagtacgatc agccatcatc ttcaacagga tcctcactgc cacctcttca tactgtacga 421 tatgaacagt taccaccacc accatcgaat cagaggaccc caactcagca gctacagtac 481 cctgtgaagg tggtcgaggc aggcggtcag gcgtatgctc agcaggttca gcaggctcag 541 cagtcgaatc ggagtggagc cgccggtgtt aacagtgctc tacaaccgaa acccctacca 601 ccattgtcat ctataacatc aatatcatcg tcagcagcag gatcctcaat atctgctcct 661 tcaacgtctc aacctagtac cacctcatca ctaatcacat caccaccgtc cacgtcttca 721 tcttcaatgg cgcctcgaaa aacgcctccc aacgcctcct cgtcgtctct gataaaacga 781 caatctcagg atgttcagga gcagcagcga gtggattttg aagtggctcg gaacgtgtcg 841 caaatcatgt cgaaaaacgg gctgaaagtg atgcacgagc cgctgctcac cggatctctt 901 cctcagttgg ctccgttggc tccactgcca ccgccaaagt ctggagtcta tcagtgcccg 961 aattgcaatc ggaatctggc caatgctcgg aatttgcaaa ggcatcggca aacttgtgga 1021 tcggctcagc acgcggctcc acagctcgcc gcgatgctcc aacggagccc cccgccgtgt 1081 gcatcggctc ctccggtcgc tcctccgacg gcaccgtcga caagcttcca gcatcacaat 1141 tcgactggga atctcacgct ttcctacagc tccagtagca gtagacatca gagctcactc 1201 tactcaccac agctggagca tcaggatcta gttggaaatc cgaatgtgat gctctccgac 1261 ggctacgagt acaaggacga tccgatgctc taccagggac cttcaggcct ttcggatagc 1321 atttggtctc gagacgatag ttttcattcg gagcccccgt cggcgtctca cgatcagctc 1381 gatatggatc atcttggatt ccccgacccc ctccaggatc ctcttcacca cctcgactcg 1441 tttgattcgg cggaccatcg gaaggaaaca ccgcgggagt gtcatgagcc cgatgagctg 1501 atgacgttag atccgacgcc gccacagtgt ggatcggaac gattctatgg gattaatatt 1561 gacgatatgc cgttgtcact ggattgtgat gagccgctga tgagatcgga gtcggcgtcg 1621 ttgtcgtcga gttctcaggg gaggaatacg ccggctgctg tttttacgtg tgaagcatgc 1681 aaaaaatcgg tatcatccga acgatcgctt cgtcgtcact acaacacttg caagatgttt 1741 cagacggaat tggcagcttc tggtgaagaa actgtctcga atagcacaac aacgacaaca 1801 acagcgacca ccacctcctc aaaatccacc ggaaatccgc tcttcacttg tgagcactgt 1861 gctcgtcagc tgtgctctat gagcaatctg aagcgtcatc gtgccacatg caaggtcgct 1921 gcctcgtcct cgtcgaattc cgccgcttca cgtccaccat cgcagccatc tacgccggct 1981 acagcgccag cgactccgat gcttcaggcg tcacaggctc cccagcctct ccaagctcca 2041 ccacaatcac caatggagac caccgcgaca gtcacctaca ccaaaactac tgtgccacca 2101 agcgttgcta atacctggaa cactgaaaag gctcagctga tctccccgaa gcctagaagc 2161 cagacgatct tttccgaagc ttcttcttcg atgaccgtcg gcgacgctct ccgggctcag 2221 cagcaccagc agaaaatgga tcaacaaatt cagattcagt tccagcagca gcagcaacag 2281 agattccaac atcatcagca gcagcaacaa gcgggtcgga tcccaccacg gccacccaat 2341 ccgattttga atcaagttca gaacccgcct cagcaagtgc aacacaatca gcatcagaat 2401 cagatgctga atccgattcg gcagccgctg cttcaaagtc cgccaccacc accaccaaag 2461 aaaggactta tcgagcataa gaacactgat cttgtgctga ttacgtcgga gccgctggcc 2521 gagagaatgg atgctaagcg aagatcttca gaaggcctgg tggctgtcac atcgacaccg 2581 cttccgccga tacaactgcc tcagagatct caggcgccag caccgtcaag gcagcagcag 2641 caacagcccc cggtcgccta ccaagtgcag ttcaatggtc gaccacttcc gccgatgcag 2701 ctcccgccgc ttcagaatcc acacaatcaa cagcagcaac atcagatgct tcatcagtca 2761 cagatgaact atcagcaggt tcagcaggtt cagcaggttc agcatgttca gcagcagcag 2821 aatcttcaaa accagcacca ccaccagcag caacatcatc agcagaatca gcagcaagcc 2881 cctggaaatc gaagcagatc gcacagcaat gtcggcaaga tggagcaaga agctcagcga 2941 caaggttccc cgctcgactc gatcatcacg tccgtgcctc tatccatcga agttcaccat 3001 cacatcatga agccaggacc gctggagcaa ggccaaagca gtgttgactc tcagtccact 3061 gctgagccaa gtccgcggaa ggctagccag caggcctaca tttgtccgga atgcaaaaag 3121 acgtatgcga gccggaagaa tgtgaagcgc caccggatgg ctgttcacaa gctgacactt 3181 gatgagatcc tcgcgaatcc ggaacaacca gcgttggatc ctctatcggc tgtaggtgga 3241 gctggacggc gtcatacggt cgctggactt gagacaccgg acagtgcgct gaaaccggcg 3301 ccgacaaaac gcaaagcttc ggaggcaccc agcgccggtg tagctacgaa gaagggaaaa 3361 gcgatggcgg cttctgttga tgaaatccaa gtgaaagaag aagaagaaga tcagaaggaa 3421 gaaacggtgg gatccgtgga gcgtcaggag ccgccaaaga agccagttgc cgatgatcac 3481 aagtcggcga tagctccact tccgccagca aatacgatca tgccaccacc accgccgtac 3541 aatcaagcgt ccgcggtgcc gctgaatccg cctagaacag ctcttccgcc tcttcaactc 3601 ccaccactgc agccacttca gtcagagtcg ccatcctggg cgtcgatgtc ggccccgccg 3661 actgctctga tcccaagaac accaagaagc agcgagtttg ccgacgagga agacactcga 3721 gcaatggcga aaatcgccgc tgagctgaag cgatccgccg aggattggcc ggtacttgca 3781 gtcattgaag gagtcgccgc tgagccgacg aacggggaag acatcgatga agatgagatt 3841 ctgatcaaga ggctgagaca aggaggcgta ctcgaggacg tcggggatgt ttcggatttg 3901 ttgagggatg ttcaaggagg tgtcgatgga gaaccattct cggaggacat gcttcttgag 3961 aagaaccttt ccacggcttc cagtgttggg cttccatcgc tagcatcgcc gggggagcag 4021 tttgggtatc agcagtattc acagcatcct cagcaacatc ctcagcaaca tcctcagcag 4081 catcctcagc agcagcaaca agtctggaat ccgaattatg aattccaagg ttacatgcag 4141 cagcagcatc caccgatgcc agtttctcag caattccagc agccgttgct tcaacgcccg 4201 gcttctcagc cgccaccagc tcgacccatc gtgaagaact cccgccgccc gtcgacaact 4261 ccgaagcctc caccgaatct cacttgctct ggatgcaaaa agatcctggg atccgactac 4321 tcgcttcgtc gtcatcgtgc cggatgcgcc gacgttcagc aggctttgaa cccggagtac 4381 ccaaggccgc cgaagcggaa agccgctcgg gaagcgcaga agatcaacga ggcggagatt 4441 ctcgcgtcga tgccggatcc acagatggtt gctgaacgaa gtgctgctgt ggcagaggcc 4501 gctgcggcag aggctgctgt tgaaaggatc ggagcactgc cgccaccgtc ggttgttcat 4561 gagattgtgc atcaagtgaa tgcggatcgg cagtcgatga aaaaacacaa caaaacgaca 4621 tctccaccac cagctcaaga agcccctccc acatgtgctc cagacgatcc gatgtcgtca 4681 tcatcatcat catccacgtc atctgcatct cctctacaag gagtttccgg aatgcggcaa 4741 gaacttctcc agtgaatgga atttggctcg tcacactcgt gaatcgtgta aaatgacgac 4801 acgggcgcat tcttatgagc caacatcagc ggctgacaaa atcgacctaa tattcatgga 4861 taagtcaaaa cgacgcgtct ctcgaacctt cctgtgcacc gtctcatcac tcatctcgta 4921 ttggctcggc gagcaaggcg atcggctcga gctcgacacg aaatgggagc attttcagct 4981 gttgctggat gtgcatacgc tcaaagttgc catcacagcc gacaatataa atctgattgc 5041 tgagcaatcg aaaaaatatc aactggaaca tgtgattcgg atggccgacc agtttatgat 5101 gaatacgaac tacaccacac caccgacaca tgttcaactc tagattatcc ccaatttttt 5161 ttacctaatt tatcatttct tttatcacat tttcccaatt tgtaccccat tgcaaacaag 5221 cccctatcaa atcaaatcac actgaccccc gaattgcctt tctactgaat tcgtttattt 5281 ttgcgtgttt tttctcccga aaaataattt aatgtatttt ctcattgttt tatatacccc 5341 agttcacgtg aatgtatgtc atttaatttt tgaatgtttt tcaaatcccc gcccgcccgt 5401 cgaaaatcta aaaaggatac tctaatacac attttttgtg cagcgattta caaaacaaat 5461 gggtcgattt ttctcgaatt ttttccccca attctctgat attgtgattg atctctttct 5521 tccccccctt ttcatacccc ccactcgcta gtttcagatg cgttattata ggtacgaagc 5581 ctctctcatc ccggacgccc acctctcctt acctttagaa tccaatatgt gtcgatgact 5641 ttgatctctt ttctctcttt ctctctctgt tttataacgt gattttcttc ttttttatta 5701 atgctttctt ccatttttct ataaatttat taatgtaaa //