Dbfetch
LOCUS NM_001313017 1893 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans C-type lectin domain-containing protein (clec-199), partial mRNA. ACCESSION NM_001313017 VERSION NM_001313017.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1893) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 1893) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1893) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 1893) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Apr 15, 2020 this sequence version replaced NM_001313017.2. COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1893 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene <1..>1893 /gene="clec-199" /locus_tag="CELE_C30H6.1" /db_xref="GeneID:183064" /db_xref="WormBase:WBGene00007820" CDS 1..1893 /gene="clec-199" /locus_tag="CELE_C30H6.1" /standard_name="C30H6.1o" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="C-type lectin domain-containing protein" /protein_id="NP_001299946.1" /db_xref="EnsemblGenomes-Gn:WBGene00007820" /db_xref="EnsemblGenomes-Tr:C30H6.1o" /db_xref="GeneID:183064" /db_xref="GOA:A0A0K3AV10" /db_xref="InterPro:IPR001304" /db_xref="InterPro:IPR016186" /db_xref="InterPro:IPR016187" /db_xref="UniProtKB/TrEMBL:A0A0K3AV10" /db_xref="WormBase:WBGene00007820" /translation="MNRFFCLTVLFSYLYRFTFSANDNAKIDNLVARQYLFSNFVANN REALKKSDGSDERWLFKFMNENSIIPPTSNSKSGSLADSGQAGLVLADAIGTAKCASG WTRWTGNGCCYKEMASPMLSWYASEDWCYSQKAGAHLASVHSRAEAEWLNYQYKLWWS KMDDWIGLRRNCDNTAWAWTDGTPVDFLWWQPNYPIYGGIEDSCTAMWDSTVLRGMYD FYPGQMDDGRSCTGSVAWALCKYDPNTSIISPKWVKADCTTTSTTTTSTTTTTTPTTP TTTTTTPTTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTT TPTTTTTTPTTTTTETTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTT TTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTT TTPTTTTQTTTKPTTTTTTPTTAKTTKSTTTTTKTTKTTSTPTTTTTTPKTPFDTSKC TVMCSTGWVYYNNLCYAKLQGPGRLNDFNKECISYGGKIAEIPDAQVNDVLRKSFGTN INDEEAWVISSGYNNVASGYTAAADSCIAMTLSQKISGSVAQRGTWRPYACSLAKNFG ICQKPI" ORIGIN 1 atgaatcggt ttttttgttt gactgttttg ttttcctact tatacagatt tacattttct 61 gcaaatgata atgctaaaat tgataacctt gtcgctcgtc aatatttatt ctcgaacttt 121 gttgcgaaca acagagaagc tttgaaaaaa tcggacggtt ctgatgaacg ctggctattt 181 aaatttatga acgaaaattc tataattcca ccaacttcaa actcaaaaag tggcagccta 241 gcagactctg gccaggctgg tcttgttctt gctgatgcta ttggaacagc aaaatgtgca 301 tctggttgga cgagatggac tggaaatgga tgttgctata aggaaatggc gtctccgatg 361 ctttcgtggt atgcttcaga agattggtgt tatagtcaaa aagctggagc acatttagct 421 tcagttcata gcagggcaga agctgagtgg ctaaattacc aatataaact ttggtggtct 481 aaaatggacg attggatcgg gttgagaaga aactgtgaca atacagcttg ggcatggacc 541 gatggcactc cggtggattt cctctggtgg caaccgaatt atccgattta tggcggaata 601 gaggacagtt gtactgctat gtgggactct acggttctcc gtggaatgta tgatttctac 661 ccaggacaaa tggatgatgg aagatcgtgc acgggcagtg ttgcatgggc gctgtgcaaa 721 tatgatccaa atacttcaat tatttctcca aaatgggtta aggcagattg tactactaca 781 tcgacgacta ctacgtccac aacaacaacc acaactccaa cgactccaac gaccacgacc 841 actacgccaa caacaactac aacggaaacc accacaacgc caacaacgga aactaccacc 901 actcccacaa ccacaacgcc gacaactacg acaacgactc cgacaacaac tacgacggaa 961 accactacaa ctccgacaac cactactacg gaaaccacta caactccgac cactacaacc 1021 acaacaccaa caacaactac tacggaaact acaacaacaa caccaacgac gacgacaacc 1081 actccaacta ccacaacgac aacaccaaca actaccacga cgactcctac aacaacaact 1141 actacaccaa ctaccactac gacggcaccg acaacaacaa ccacaactcc aacgactacc 1201 actacgactc ctacaacaac tactaccgta ccaacaacta caacaacaac tcccactact 1261 acaaccacta caaccactac accaacaaca acaacaacga caccgacaac tacaaccact 1321 ccagcaacga ctactagcga aacaactaca acgacgccaa ctactacaac tcaaaccaca 1381 acgaagccta caactactac aactacacca acgacagcaa aaactacaaa gtccacgaca 1441 accactacaa aaactacaaa aaccacatct accccaacta caaccactac aacacccaaa 1501 actccattcg acacgtcaaa gtgtactgtc atgtgctcaa ctggttgggt gtattataat 1561 aatttatgtt atgcgaaact tcaaggtcct ggtagactca atgatttcaa taaagaatgc 1621 atcagttatg gtggaaaaat tgctgagata ccggatgctc aagtaaatga tgtgttgaga 1681 aaatcattcg gaacaaatat caatgacgaa gaagcgtggg taatttctag tgggtacaac 1741 aacgtggcaa gtggatatac tgctgctgct gattcatgta ttgctatgac tctatctcaa 1801 aaaatcagtg gttcagtggc gcaacgagga acttggagac cttatgcatg ctcacttgcc 1861 aagaattttg gaatttgtca gaaacctatt tga //