Dbfetch
LOCUS NM_001307050 7636 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Piezo-type mechanosensitive ion channel
component 1 (pezo-1), mRNA.
ACCESSION NM_001307050
VERSION NM_001307050.3
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 7636)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 7636)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 7636)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 7636)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003282).
On Apr 15, 2020 this sequence version replaced NM_001307050.2.
FEATURES Location/Qualifiers
source 1..7636
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="IV"
gene 1..7636
/gene="pezo-1"
/locus_tag="CELE_C10C5.1"
/db_xref="GeneID:182492"
/db_xref="WormBase:WBGene00007505"
CDS 53..7261
/gene="pezo-1"
/locus_tag="CELE_C10C5.1"
/standard_name="C10C5.1f"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Piezo-type mechanosensitive ion channel
component 1"
/protein_id="NP_001293979.1"
/db_xref="EnsemblGenomes-Gn:WBGene00007505"
/db_xref="EnsemblGenomes-Tr:C10C5.1f"
/db_xref="GeneID:182492"
/db_xref="GOA:A0A061AE33"
/db_xref="InterPro:IPR027272"
/db_xref="InterPro:IPR031334"
/db_xref="InterPro:IPR031805"
/db_xref="UniProtKB/TrEMBL:A0A061AE33"
/db_xref="WormBase:WBGene00007505"
/translation="MTVPPLLKSCVVKLLLPAALLAAAIIRPSFLSIGYVLLALVSAV
LPPIRKSLALPKLVGTFVIITFLFCLAVALGVGSYQISEQVVHKNDRTYICNRSDTTL
FRSIGLVRFHPTGTFESTRAFLPEIIATSAALLTIIIVMFLSHRDEQLDVVGDVVTVR
SESGREQRRQRKLAAIMWSAIGNSLRRLTNFVLFLFTAYVGIVKPSLSNSIYFLAFLF
ISTWWSTYTPLRHGVYNQIKKFLIFYSALHFLVLYTYQIPIVHHSWLPTGSFLPRLFG
LTVLMDSSCPEWWKFPFVAPDFNDDDLIMKWPLYANPIVVLVFFYLTVAQYKFTRNGS
REYIDDNEYGSSVHEELLSNASSSANDDEQGRARSRSPLRNGEEQGSIPLRKVTSQVV
DRNKLSNIFNTPGDKESAASKGMIAVMTFVIFHSYSIALTAMMTWALLYHSIFGLILL
ILTCILWIFRDTRKSSFAMAPIILMYIEFLLILQYFLSMDIHAEIGDPAWMNFVGIEW
TTLPVHAVIILCVQTLLTLPVFLLLRLARREKFYESLSDYERQRRINSYGTFGASKTG
AGGVAVAKFQDPKSRKFAAFVEYLSNKVSVYFIFVVSVVLLVVSTCFAPNFYNILFFA
LWALNLIYLKFSFRLYRGLAYAFWLTLTFYTSIVIIALYIYQFPGVSQWIIRNTSLSQ
EWLNAIGLVDFRAIGESGALFLQLLAPIALFVVTMLQLKFFHGPWSRATSPRRAENDP
PTSTTEAAAVASTSGTQGRAHAAGDTLVKKLHKLANQTIELLWRFFEVHISKIVFVII
AIFIANNINALYIPLVILLSLAICLPSAADGIFSLFMCAYLFLVALSKMIYQLDIVPE
LSQIDRGVGADNCSHGNISMPEWFGLKKEVEGTEPIYMLFGVIVSIIALAFQSIVIYR
QRHYRASLGLPESMRAKVFPDFHHSHFDRSLKNAIQFLIDYGFYKFGLEITMIAIGID
IFNRMDALAAIQCFWLVLFALNKRVFVRRIWVFYVIYMAILYPLQFFSYVGLPPDSCI
EYPWSYWIPSYSDDARFNLSYLLNLSIYGVNWPSAYLIGDFFVLLLASCQLAVFRREG
EDNDSIYNDGNFVIKPENPQYDFIDTKKSYVDYFKSFVFHYGHWITLMSTLAAGIAGT
SLFALGYIIFTLTMLWSGNNLYVMNSTLRSFEHTLKRWNALLGYTLFTITMKVCLQIF
GCVFLSWFDQSGGWGKTLCIVRQLFSITCVNNECHVLKELEDFSKACAVETKEGNIGF
DVIALSFLVFQIRIFHSWYFQHCMVEYRSEVILANRGAVLKNQLIEKEMKEQNEQQKA
KFNDIRRRTEAIRERYQKQIERGAAERDFEPVTYGHAKRAGDYYMFKYDPENDDLVEP
VDSFVPEVDPKATAYDRLDPGQIMYAATAHDLDLAKTVQQVKKGDTIKDPDSRALIAV
SEPEARKPGGTEETDGDEDEDNKDSKVESTAKFIQKMIASALDLCSVTLNKLCREHRY
VGFVLSKEKQKLKSGHSESLSNTSRKLTDIRSAVDLPSLQLVQSANDVEKMETAVSVD
WQQKSSATRLLNAVVNCIGAHTDILCYFFAIMTQVMTGGLITLPLPLMSLFWGNLSNP
RPSKFFWVTMITYTECVIVIKFVCQFAFMPYNSITWRTEHQMDPMSLDKLFGVSQRDS
FALWDIVLLFSLFFHRYMLRKLGLWKDANLTDTFTLKEEPRSASGSDTGSPKKIAQEP
KVVVTQSDTLEGTSGGEIVIPSDPNAVSNMEELDCEPPIPEKQSGPIGRFIHQLFHPK
FRYIRDLYPIMFGIDVICFLIMTFGYSAFGEGGSGNVLDDVKASRIPVTLVVMLVGMT
LAIIIDRALYLRKSVVGKLIYQVLMIAFLHIWVFLVLPNMTRRSAISNHVAQALYVIK
SCYFLVSAWQIRNGYPELCIGNLLTHSYGMTNMIAFKVFMNIPFLFELRTAIDWTWTD
TSMPLFDFFNMENFYAHIFNIKCARQFEAAYPAPRGIPKGKLVKYMMGFPIIIGVVIF
IFSPLLLWSLLNQIGTISMPEKVTLRISIEGYPPLYEMEAQGSNHDNAELGMIKPDQL
ASLNQALTDSYTTRDTNSILRSRMSVSYLKGYTYEDILIVRFRPESEIYWPISQDSRN
AMIDKLSRNTSVNFEVSLEFTRPYDPNENAALKHSKSWLVPISLDMTIRAKIQSALRG
DPGHPILIPQSIPAFIQVPNQGELTLPTSIGNTIINDGNPRINTTGMEKSDEARAWFD
SLTLNLEQGKSQNEKMWIATSEHPGDQNAKLWIKTANTTYSGRPYLQVVGFIDRAFPS
FLAKVFKGGVIAVYLSVILVVGRGLVRGIFTTSPSTVMFTELPNADHLLKICLDIYLV
REAKDFMLEQDLFAKLIFLFRSPATLIEWTRMSKKKQE"
ORIGIN
1 agaatcacat gcggtaaatc tgaatcggtg gtcgtaacac agcaacaaca gaatgacggt
61 cccgccgctt ttaaaatcgt gcgtcgtcaa attgctgctt ccggcagcac tgcttgcagc
121 tgccataatc cggccgagct ttttatcaat tggctacgtc ctacttgcac ttgtcagcgc
181 cgttctgcca ccaattcgaa agtctttagc acttcccaaa ctagttggaa cattcgttat
241 tatcactttt ctcttctgcc tagcagtcgc actaggagtt ggttcctacc agatctcaga
301 acaagttgtt cataaaaatg accggacata catttgcaat cgatccgaca ctactctgtt
361 ccggagcatt ggccttgtcc gattccatcc aacaggaaca tttgaatcaa ctcgagcatt
421 tcttccggag attattgcca cgtctgcagc tctgctcact atcataatcg tcatgttttt
481 gtcgcataga gacgagcaat tggacgtcgt tggtgatgtt gtaacagtca ggagtgaatc
541 tggccgcgag caacgacgac aaagaaagtt agccgctata atgtggagtg caatcggaaa
601 ttctctacga agattgacta atttcgtgct tttcctgttc acggcatatg ttggaatcgt
661 gaaaccatcg ctgagtaact caatttactt tctcgctttt ctgttcatat ccacgtggtg
721 gtccacatac acaccactga gacatggagt gtacaatcag ataaagaagt ttctcatatt
781 ctactcggcg cttcatttct tggttctcta cacatatcaa attccgatcg ttcaccactc
841 atggctgccg accggttcat ttctgccacg tctgttcgga cttactgtac tcatggattc
901 atcatgtccc gaatggtgga agtttccatt tgtagctcca gactttaacg atgatgattt
961 gattatgaaa tggccgttgt atgcaaatcc gattgttgta ctggtgttct tctacctcac
1021 agttgctcaa tacaaattca cgagaaacgg atctcgtgaa tatatcgatg ataacgaata
1081 tgggtcatca gttcacgaag aacttctgtc caatgcatcc tcctctgcta atgatgatga
1141 acagggtcga gctcgttcgc gatctccgct gcgaaatggt gaagaacaag gctcaatccc
1201 actacggaaa gttacttcgc aagttgttga taggaataag ttgagcaaca tttttaatac
1261 acccggagat aaggaatctg ctgcttcgaa aggaatgatt gcagtcatga catttgtcat
1321 tttccattcg tattcaatcg cgctgactgc tatgatgaca tgggctctcc tctatcattc
1381 gatattcggt ctcattctcc tcatcctcac atgtatcttg tggatcttcc gtgatacgag
1441 aaagtcatcg tttgcaatgg cccctattat tttgatgtat atcgagtttc tattgattct
1501 tcaatatttc ctcagtatgg atattcatgc agaaattggc gatccagcgt ggatgaactt
1561 tgttggaatc gaatggacta ctcttccagt acatgctgtc atcattctct gtgtccagac
1621 tcttctcact ctcccagtgt tcttgcttct acgtttggct cgcagggaga agttttacga
1681 atcgctgagt gattatgaac gacaacgacg aatcaactca tatggaacat ttggagcatc
1741 aaagactgga gctgggggtg ttgcagtggc taagtttcag gatccaaaaa gtcggaagtt
1801 cgcggcattt gtggaatatc tgtcgaataa agtgtctgtc tacttcatat ttgtagtatc
1861 agtggtactt ttggtggtct ctacgtgttt tgctccgaat ttctacaata ttctattctt
1921 cgcactatgg gcattgaact tgatttatct caagttctca ttccgtctgt atcgtggatt
1981 ggcatatgca ttctggctaa ctctcacgtt ctacacttca attgttatta tcgccctcta
2041 catttatcag ttccctggag tatctcaatg gattattcga aatactagtt tgtcgcagga
2101 gtggctgaat gcaattggac ttgtcgattt tagagctatc ggtgaatcgg gagccctatt
2161 tctacaatta ctcgccccaa ttgccttgtt cgtcgtcaca atgctccaac tcaagttttt
2221 ccatggacca tggagtcgag caacgtcacc aagaagagca gaaaatgatc cacctacaag
2281 tacgacggag gctgcggcgg tagcaagcac atctggaaca caaggaagag cacatgctgc
2341 aggcgatacc cttgtcaaga agctgcacaa attggcaaat cagacaatcg aactgttatg
2401 gaggtttttc gaagttcaca tttcgaaaat tgtctttgtc atcattgcga tttttattgc
2461 caacaatatc aatgctctat acattccact tgttattctc ctctcattgg ctatatgtct
2521 accatcagct gcagatggga tattctcttt atttatgtgt gcctacttat tcctcgtggc
2581 actgagcaag atgatctacc aactggatat tgttcccgag ttatcacaaa tcgaccgagg
2641 agttggagca gataactgtt cacatggaaa tatttcaatg cctgaatggt ttggattgaa
2701 gaaggaagtt gaaggaactg aaccaattta tatgctcttt ggagtcattg tttcgattat
2761 tgcattggct tttcaatcaa ttgttatata tcgacaaaga cattatcgag cttcactggg
2821 acttcctgaa tcgatgcgag ctaaagtgtt cccggacttc catcattctc attttgatag
2881 atctctcaaa aatgccatcc aattcttgat agactatggt ttctataagt ttggacttga
2941 aatcacgatg atcgccattg gaattgacat tttcaatcga atggatgcat tggcagcgat
3001 tcaatgtttc tggcttgtcc tgtttgcgct caataaaaga gtctttgttc gaagaatatg
3061 ggtattctat gtgatctata tggcgattct gtatccactt cagttctttt catatgttgg
3121 attaccacct gacagttgta ttgagtatcc atggtcgtat tggattccat cgtatagtga
3181 tgatgcgaga ttcaatctgt cgtatcttct gaacttgtca atatacggtg taaactggcc
3241 atcagcatat ctcattggcg atttcttcgt actcctcttg gcatcatgcc aattagcagt
3301 tttccggcga gaaggagaag ataatgattc aatttacaat gatggaaact ttgtgattaa
3361 gccagaaaat ccacaatatg actttattga caccaaaaag agttacgttg attatttcaa
3421 atcattcgtt ttccattatg gacactggat tacattgatg tctacactag cagcaggaat
3481 tgctggaacg tcactttttg ctttgggata cattatattc actctgacaa tgctgtggtc
3541 tggtaacaat ttgtatgtga tgaactcaac tctacgatca tttgaacata ctttgaaacg
3601 atggaatgca cttttgggat acacattgtt cacgattaca atgaaagttt gccttcaaat
3661 atttggatgt gtattcctgt cgtggttcga tcaatctggt ggatggggaa agactctgtg
3721 catcgttcgt caactcttca gtatcacatg tgttaataac gaatgtcatg tgctcaaaga
3781 gctggaggat ttctcgaagg cgtgtgctgt tgagacgaaa gaaggaaata ttggatttga
3841 tgtgattgcg ctatccttcc tcgtcttcca aatccgaatt ttccattctt ggtatttcca
3901 acactgcatg gttgaatatc gaagtgaggt tattctggcc aatagaggtg ccgtgctgaa
3961 gaatcaactg attgaaaagg aaatgaagga acaaaacgag cagcaaaaag ccaagttcaa
4021 tgatatcaga agaagaactg aagctattcg tgaaagatat caaaaacaaa tcgaacgagg
4081 agctgctgaa cgtgacttcg agccggttac ttatgggcac gccaaacgag cgggagacta
4141 ctacatgttc aaatacgatc ctgaaaatga tgatcttgtg gaacccgtcg acagttttgt
4201 accagaagtt gatcccaagg caactgcata tgatcgactt gatcctggac agataatgta
4261 cgctgccacc gctcacgacc tcgacctcgc caaaactgta cagcaagtca agaaaggcga
4321 tactatcaaa gatcctgatt cacgtgctct tatcgctgtt tctgaaccag aagctcgtaa
4381 gccaggaggc actgaagaaa cggatggtga tgaagatgag gataataagg attcgaaagt
4441 ggaaagtact gctaaattca ttcaaaaaat gatcgcttct gccttggact tgtgtagtgt
4501 aacactaaac aaactgtgca gagaacaccg atatgttgga tttgttttga gcaaggaaaa
4561 acaaaagttg aagtcaggac actcggaatc tctttcaaat acatctagaa agctgacgga
4621 tattcgatct gcagttgatc taccaagtct tcaacttgtg caatcggcga atgatgttga
4681 aaagatggag acagccgtca gcgtggattg gcaacaaaaa tcatcagcaa cgagactatt
4741 gaatgcagtt gtgaattgta ttggagcaca cactgatatt ctctgctact tcttcgcaat
4801 tatgacacaa gtgatgactg gtggacttat tactcttcca cttcctctga tgtcactatt
4861 ctggggaaat ctatcgaatc ctcgtccatc caagttcttc tgggtcacaa tgatcaccta
4921 cactgagtgt gtcattgtta tcaagtttgt ttgccaattt gcattcatgc cttacaattc
4981 tatcacgtgg cgaacagagc atcaaatgga cccgatgtca ttggataagt tattcggagt
5041 atcacagaga gatagttttg cactttggga cattgttttg ctcttctcac tcttcttcca
5101 tcggtatatg ctcagaaagt tagggttatg gaaggatgcc aatttgacgg acacgttcac
5161 tttgaaggaa gagcctcgat cggcgtcagg atcggacaca ggatcaccca agaaaattgc
5221 tcaagagcca aaggttgttg taactcagtc agataccctt gaaggtacaa gtggaggaga
5281 gatagtcata ccatctgatc caaatgcagt ttccaatatg gaagaattag actgcgaacc
5341 tccgattcca gagaagcaaa gtggaccaat tggaagattc attcatcaat tattccatcc
5401 aaaattccgt tacattcgtg atttgtatcc aataatgttt ggaatcgatg tgatatgctt
5461 cctcatcatg acatttggat actcggcatt tggtgaagga ggttctggaa atgttttaga
5521 tgatgtgaag gcttctcgta ttccggtaac acttgttgtt atgctcgttg gaatgactct
5581 ggcaattatc attgatcgag cactctacct cagaaaatca gttgtcggaa agctaatcta
5641 tcaagtctta atgattgctt tccttcacat ttgggtattc cttgttcttc caaatatgac
5701 tcgtcgttct gcgatatcga atcacgttgc tcaagcattg tacgtcatca aatcgtgcta
5761 tttccttgtg tctgcttggc agatccgaaa tggttatcct gaactttgta ttggaaatct
5821 attaacacat tcatacggaa tgaccaatat gattgcattc aaagtattca tgaatattcc
5881 attcctcttc gagcttcgta cagctattga ttggacatgg acagatactt caatgcctct
5941 tttcgatttc ttcaatatgg aaaatttcta tgctcatata ttcaatatca agtgtgcccg
6001 ccagttcgaa gctgcctatc cagctccaag agggattccc aaaggaaagt tggtcaagta
6061 tatgatggga ttcccaatta tcattggagt cgttatcttc atcttttctc ctctattgct
6121 ctggtcgcta ctcaatcaaa tcggaactat cagtatgcca gaaaaagtta cgttgaggat
6181 ttcgattgaa ggatatccac cactttacga gatggaggca caaggaagta atcacgataa
6241 cgctgaactt ggaatgataa aacctgatca attggcatct ttgaatcaag cattgacgga
6301 tagttacacg acacgagaca ctaattctat tttaagatca agaatgtctg tatcatatct
6361 gaaaggatac acatatgagg atattctgat tgtgcgattc cgtccagaat ctgaaattta
6421 ttggccgatt tcacaggatt cgagaaatgc gatgatcgat aaattgagcc gaaacacgtc
6481 agtcaatttt gaagtatctc tggaattcac tcggccatat gatccaaatg aaaacgctgc
6541 tttaaaacat tcgaaatcgt ggcttgttcc aatctccctg gatatgacga ttcgagcaaa
6601 aattcaaagt gctctccgag gagatccagg tcatccgatt ctcattccac agtcaattcc
6661 tgcgtttatt caagttccaa atcaaggaga attgaccctt ccaacatcaa tcggaaatac
6721 tattatcaat gacggaaatc cacggattaa tacgaccggg atggaaaaat cagacgaagc
6781 tcgggcttgg ttcgactcgt taaccttgaa tctcgaacaa ggaaaatcgc aaaacgagaa
6841 aatgtggatc gccacatccg aacatccagg agaccaaaat gcgaaactct ggataaagac
6901 tgcaaatacg acgtattcgg gaaggccgta ccttcaagtt gtcggattta ttgatagagc
6961 attcccatca tttttggcga aagttttcaa aggaggagtc attgcagtgt atctttcagt
7021 tatcctcgtc gttggaagag gtctggttcg tggaatcttc accacatctc caagcactgt
7081 catgttcaca gaattaccga atgcggatca tcttctcaaa atttgtctcg acatctattt
7141 ggttcgagaa gcgaaggact tcatgttgga gcaggatctc ttcgccaaat taatattcct
7201 gttccgatca ccagcgacac tcatcgaatg gacacgaatg agcaaaaaga agcaagaata
7261 aatttaaata tttcactgtc aaatattctg cgaaccgaac catcgttaat cattttattt
7321 tttactttct ctgtttctca tcgaaaagac caaaaacctg aaaatattcc caccatttcc
7381 ttttttttct ttccgtctct ggtactttac gagttgtttc ccctttctct ctcactgctc
7441 gcctgattag gtcacactat tttcaatttt tggaaccaca tattatatgt ctatgtattg
7501 ttagattcct tctctctctc tccttctttt cgggttttct tttctatttc cattttgagt
7561 tttttctttt cgtttcttgt ttacttttta cgattctgta aatgacgaag aatattttaa
7621 taaattttct attttt
//