Dbfetch

LOCUS       NM_001307050            7636 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans Piezo-type mechanosensitive ion channel
            component 1 (pezo-1), mRNA.
ACCESSION   NM_001307050
VERSION     NM_001307050.3
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 7636)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 7636)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 7636)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 7636)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003282).
            
            On Apr 15, 2020 this sequence version replaced NM_001307050.2.
FEATURES             Location/Qualifiers
     source          1..7636
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="IV"
     gene            1..7636
                     /gene="pezo-1"
                     /locus_tag="CELE_C10C5.1"
                     /db_xref="GeneID:182492"
                     /db_xref="WormBase:WBGene00007505"
     CDS             53..7261
                     /gene="pezo-1"
                     /locus_tag="CELE_C10C5.1"
                     /standard_name="C10C5.1f"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="Piezo-type mechanosensitive ion channel
                     component 1"
                     /protein_id="NP_001293979.1"
                     /db_xref="EnsemblGenomes-Gn:WBGene00007505"
                     /db_xref="EnsemblGenomes-Tr:C10C5.1f"
                     /db_xref="GeneID:182492"
                     /db_xref="GOA:A0A061AE33"
                     /db_xref="InterPro:IPR027272"
                     /db_xref="InterPro:IPR031334"
                     /db_xref="InterPro:IPR031805"
                     /db_xref="UniProtKB/TrEMBL:A0A061AE33"
                     /db_xref="WormBase:WBGene00007505"
                     /translation="MTVPPLLKSCVVKLLLPAALLAAAIIRPSFLSIGYVLLALVSAV
                     LPPIRKSLALPKLVGTFVIITFLFCLAVALGVGSYQISEQVVHKNDRTYICNRSDTTL
                     FRSIGLVRFHPTGTFESTRAFLPEIIATSAALLTIIIVMFLSHRDEQLDVVGDVVTVR
                     SESGREQRRQRKLAAIMWSAIGNSLRRLTNFVLFLFTAYVGIVKPSLSNSIYFLAFLF
                     ISTWWSTYTPLRHGVYNQIKKFLIFYSALHFLVLYTYQIPIVHHSWLPTGSFLPRLFG
                     LTVLMDSSCPEWWKFPFVAPDFNDDDLIMKWPLYANPIVVLVFFYLTVAQYKFTRNGS
                     REYIDDNEYGSSVHEELLSNASSSANDDEQGRARSRSPLRNGEEQGSIPLRKVTSQVV
                     DRNKLSNIFNTPGDKESAASKGMIAVMTFVIFHSYSIALTAMMTWALLYHSIFGLILL
                     ILTCILWIFRDTRKSSFAMAPIILMYIEFLLILQYFLSMDIHAEIGDPAWMNFVGIEW
                     TTLPVHAVIILCVQTLLTLPVFLLLRLARREKFYESLSDYERQRRINSYGTFGASKTG
                     AGGVAVAKFQDPKSRKFAAFVEYLSNKVSVYFIFVVSVVLLVVSTCFAPNFYNILFFA
                     LWALNLIYLKFSFRLYRGLAYAFWLTLTFYTSIVIIALYIYQFPGVSQWIIRNTSLSQ
                     EWLNAIGLVDFRAIGESGALFLQLLAPIALFVVTMLQLKFFHGPWSRATSPRRAENDP
                     PTSTTEAAAVASTSGTQGRAHAAGDTLVKKLHKLANQTIELLWRFFEVHISKIVFVII
                     AIFIANNINALYIPLVILLSLAICLPSAADGIFSLFMCAYLFLVALSKMIYQLDIVPE
                     LSQIDRGVGADNCSHGNISMPEWFGLKKEVEGTEPIYMLFGVIVSIIALAFQSIVIYR
                     QRHYRASLGLPESMRAKVFPDFHHSHFDRSLKNAIQFLIDYGFYKFGLEITMIAIGID
                     IFNRMDALAAIQCFWLVLFALNKRVFVRRIWVFYVIYMAILYPLQFFSYVGLPPDSCI
                     EYPWSYWIPSYSDDARFNLSYLLNLSIYGVNWPSAYLIGDFFVLLLASCQLAVFRREG
                     EDNDSIYNDGNFVIKPENPQYDFIDTKKSYVDYFKSFVFHYGHWITLMSTLAAGIAGT
                     SLFALGYIIFTLTMLWSGNNLYVMNSTLRSFEHTLKRWNALLGYTLFTITMKVCLQIF
                     GCVFLSWFDQSGGWGKTLCIVRQLFSITCVNNECHVLKELEDFSKACAVETKEGNIGF
                     DVIALSFLVFQIRIFHSWYFQHCMVEYRSEVILANRGAVLKNQLIEKEMKEQNEQQKA
                     KFNDIRRRTEAIRERYQKQIERGAAERDFEPVTYGHAKRAGDYYMFKYDPENDDLVEP
                     VDSFVPEVDPKATAYDRLDPGQIMYAATAHDLDLAKTVQQVKKGDTIKDPDSRALIAV
                     SEPEARKPGGTEETDGDEDEDNKDSKVESTAKFIQKMIASALDLCSVTLNKLCREHRY
                     VGFVLSKEKQKLKSGHSESLSNTSRKLTDIRSAVDLPSLQLVQSANDVEKMETAVSVD
                     WQQKSSATRLLNAVVNCIGAHTDILCYFFAIMTQVMTGGLITLPLPLMSLFWGNLSNP
                     RPSKFFWVTMITYTECVIVIKFVCQFAFMPYNSITWRTEHQMDPMSLDKLFGVSQRDS
                     FALWDIVLLFSLFFHRYMLRKLGLWKDANLTDTFTLKEEPRSASGSDTGSPKKIAQEP
                     KVVVTQSDTLEGTSGGEIVIPSDPNAVSNMEELDCEPPIPEKQSGPIGRFIHQLFHPK
                     FRYIRDLYPIMFGIDVICFLIMTFGYSAFGEGGSGNVLDDVKASRIPVTLVVMLVGMT
                     LAIIIDRALYLRKSVVGKLIYQVLMIAFLHIWVFLVLPNMTRRSAISNHVAQALYVIK
                     SCYFLVSAWQIRNGYPELCIGNLLTHSYGMTNMIAFKVFMNIPFLFELRTAIDWTWTD
                     TSMPLFDFFNMENFYAHIFNIKCARQFEAAYPAPRGIPKGKLVKYMMGFPIIIGVVIF
                     IFSPLLLWSLLNQIGTISMPEKVTLRISIEGYPPLYEMEAQGSNHDNAELGMIKPDQL
                     ASLNQALTDSYTTRDTNSILRSRMSVSYLKGYTYEDILIVRFRPESEIYWPISQDSRN
                     AMIDKLSRNTSVNFEVSLEFTRPYDPNENAALKHSKSWLVPISLDMTIRAKIQSALRG
                     DPGHPILIPQSIPAFIQVPNQGELTLPTSIGNTIINDGNPRINTTGMEKSDEARAWFD
                     SLTLNLEQGKSQNEKMWIATSEHPGDQNAKLWIKTANTTYSGRPYLQVVGFIDRAFPS
                     FLAKVFKGGVIAVYLSVILVVGRGLVRGIFTTSPSTVMFTELPNADHLLKICLDIYLV
                     REAKDFMLEQDLFAKLIFLFRSPATLIEWTRMSKKKQE"
ORIGIN      
        1 agaatcacat gcggtaaatc tgaatcggtg gtcgtaacac agcaacaaca gaatgacggt
       61 cccgccgctt ttaaaatcgt gcgtcgtcaa attgctgctt ccggcagcac tgcttgcagc
      121 tgccataatc cggccgagct ttttatcaat tggctacgtc ctacttgcac ttgtcagcgc
      181 cgttctgcca ccaattcgaa agtctttagc acttcccaaa ctagttggaa cattcgttat
      241 tatcactttt ctcttctgcc tagcagtcgc actaggagtt ggttcctacc agatctcaga
      301 acaagttgtt cataaaaatg accggacata catttgcaat cgatccgaca ctactctgtt
      361 ccggagcatt ggccttgtcc gattccatcc aacaggaaca tttgaatcaa ctcgagcatt
      421 tcttccggag attattgcca cgtctgcagc tctgctcact atcataatcg tcatgttttt
      481 gtcgcataga gacgagcaat tggacgtcgt tggtgatgtt gtaacagtca ggagtgaatc
      541 tggccgcgag caacgacgac aaagaaagtt agccgctata atgtggagtg caatcggaaa
      601 ttctctacga agattgacta atttcgtgct tttcctgttc acggcatatg ttggaatcgt
      661 gaaaccatcg ctgagtaact caatttactt tctcgctttt ctgttcatat ccacgtggtg
      721 gtccacatac acaccactga gacatggagt gtacaatcag ataaagaagt ttctcatatt
      781 ctactcggcg cttcatttct tggttctcta cacatatcaa attccgatcg ttcaccactc
      841 atggctgccg accggttcat ttctgccacg tctgttcgga cttactgtac tcatggattc
      901 atcatgtccc gaatggtgga agtttccatt tgtagctcca gactttaacg atgatgattt
      961 gattatgaaa tggccgttgt atgcaaatcc gattgttgta ctggtgttct tctacctcac
     1021 agttgctcaa tacaaattca cgagaaacgg atctcgtgaa tatatcgatg ataacgaata
     1081 tgggtcatca gttcacgaag aacttctgtc caatgcatcc tcctctgcta atgatgatga
     1141 acagggtcga gctcgttcgc gatctccgct gcgaaatggt gaagaacaag gctcaatccc
     1201 actacggaaa gttacttcgc aagttgttga taggaataag ttgagcaaca tttttaatac
     1261 acccggagat aaggaatctg ctgcttcgaa aggaatgatt gcagtcatga catttgtcat
     1321 tttccattcg tattcaatcg cgctgactgc tatgatgaca tgggctctcc tctatcattc
     1381 gatattcggt ctcattctcc tcatcctcac atgtatcttg tggatcttcc gtgatacgag
     1441 aaagtcatcg tttgcaatgg cccctattat tttgatgtat atcgagtttc tattgattct
     1501 tcaatatttc ctcagtatgg atattcatgc agaaattggc gatccagcgt ggatgaactt
     1561 tgttggaatc gaatggacta ctcttccagt acatgctgtc atcattctct gtgtccagac
     1621 tcttctcact ctcccagtgt tcttgcttct acgtttggct cgcagggaga agttttacga
     1681 atcgctgagt gattatgaac gacaacgacg aatcaactca tatggaacat ttggagcatc
     1741 aaagactgga gctgggggtg ttgcagtggc taagtttcag gatccaaaaa gtcggaagtt
     1801 cgcggcattt gtggaatatc tgtcgaataa agtgtctgtc tacttcatat ttgtagtatc
     1861 agtggtactt ttggtggtct ctacgtgttt tgctccgaat ttctacaata ttctattctt
     1921 cgcactatgg gcattgaact tgatttatct caagttctca ttccgtctgt atcgtggatt
     1981 ggcatatgca ttctggctaa ctctcacgtt ctacacttca attgttatta tcgccctcta
     2041 catttatcag ttccctggag tatctcaatg gattattcga aatactagtt tgtcgcagga
     2101 gtggctgaat gcaattggac ttgtcgattt tagagctatc ggtgaatcgg gagccctatt
     2161 tctacaatta ctcgccccaa ttgccttgtt cgtcgtcaca atgctccaac tcaagttttt
     2221 ccatggacca tggagtcgag caacgtcacc aagaagagca gaaaatgatc cacctacaag
     2281 tacgacggag gctgcggcgg tagcaagcac atctggaaca caaggaagag cacatgctgc
     2341 aggcgatacc cttgtcaaga agctgcacaa attggcaaat cagacaatcg aactgttatg
     2401 gaggtttttc gaagttcaca tttcgaaaat tgtctttgtc atcattgcga tttttattgc
     2461 caacaatatc aatgctctat acattccact tgttattctc ctctcattgg ctatatgtct
     2521 accatcagct gcagatggga tattctcttt atttatgtgt gcctacttat tcctcgtggc
     2581 actgagcaag atgatctacc aactggatat tgttcccgag ttatcacaaa tcgaccgagg
     2641 agttggagca gataactgtt cacatggaaa tatttcaatg cctgaatggt ttggattgaa
     2701 gaaggaagtt gaaggaactg aaccaattta tatgctcttt ggagtcattg tttcgattat
     2761 tgcattggct tttcaatcaa ttgttatata tcgacaaaga cattatcgag cttcactggg
     2821 acttcctgaa tcgatgcgag ctaaagtgtt cccggacttc catcattctc attttgatag
     2881 atctctcaaa aatgccatcc aattcttgat agactatggt ttctataagt ttggacttga
     2941 aatcacgatg atcgccattg gaattgacat tttcaatcga atggatgcat tggcagcgat
     3001 tcaatgtttc tggcttgtcc tgtttgcgct caataaaaga gtctttgttc gaagaatatg
     3061 ggtattctat gtgatctata tggcgattct gtatccactt cagttctttt catatgttgg
     3121 attaccacct gacagttgta ttgagtatcc atggtcgtat tggattccat cgtatagtga
     3181 tgatgcgaga ttcaatctgt cgtatcttct gaacttgtca atatacggtg taaactggcc
     3241 atcagcatat ctcattggcg atttcttcgt actcctcttg gcatcatgcc aattagcagt
     3301 tttccggcga gaaggagaag ataatgattc aatttacaat gatggaaact ttgtgattaa
     3361 gccagaaaat ccacaatatg actttattga caccaaaaag agttacgttg attatttcaa
     3421 atcattcgtt ttccattatg gacactggat tacattgatg tctacactag cagcaggaat
     3481 tgctggaacg tcactttttg ctttgggata cattatattc actctgacaa tgctgtggtc
     3541 tggtaacaat ttgtatgtga tgaactcaac tctacgatca tttgaacata ctttgaaacg
     3601 atggaatgca cttttgggat acacattgtt cacgattaca atgaaagttt gccttcaaat
     3661 atttggatgt gtattcctgt cgtggttcga tcaatctggt ggatggggaa agactctgtg
     3721 catcgttcgt caactcttca gtatcacatg tgttaataac gaatgtcatg tgctcaaaga
     3781 gctggaggat ttctcgaagg cgtgtgctgt tgagacgaaa gaaggaaata ttggatttga
     3841 tgtgattgcg ctatccttcc tcgtcttcca aatccgaatt ttccattctt ggtatttcca
     3901 acactgcatg gttgaatatc gaagtgaggt tattctggcc aatagaggtg ccgtgctgaa
     3961 gaatcaactg attgaaaagg aaatgaagga acaaaacgag cagcaaaaag ccaagttcaa
     4021 tgatatcaga agaagaactg aagctattcg tgaaagatat caaaaacaaa tcgaacgagg
     4081 agctgctgaa cgtgacttcg agccggttac ttatgggcac gccaaacgag cgggagacta
     4141 ctacatgttc aaatacgatc ctgaaaatga tgatcttgtg gaacccgtcg acagttttgt
     4201 accagaagtt gatcccaagg caactgcata tgatcgactt gatcctggac agataatgta
     4261 cgctgccacc gctcacgacc tcgacctcgc caaaactgta cagcaagtca agaaaggcga
     4321 tactatcaaa gatcctgatt cacgtgctct tatcgctgtt tctgaaccag aagctcgtaa
     4381 gccaggaggc actgaagaaa cggatggtga tgaagatgag gataataagg attcgaaagt
     4441 ggaaagtact gctaaattca ttcaaaaaat gatcgcttct gccttggact tgtgtagtgt
     4501 aacactaaac aaactgtgca gagaacaccg atatgttgga tttgttttga gcaaggaaaa
     4561 acaaaagttg aagtcaggac actcggaatc tctttcaaat acatctagaa agctgacgga
     4621 tattcgatct gcagttgatc taccaagtct tcaacttgtg caatcggcga atgatgttga
     4681 aaagatggag acagccgtca gcgtggattg gcaacaaaaa tcatcagcaa cgagactatt
     4741 gaatgcagtt gtgaattgta ttggagcaca cactgatatt ctctgctact tcttcgcaat
     4801 tatgacacaa gtgatgactg gtggacttat tactcttcca cttcctctga tgtcactatt
     4861 ctggggaaat ctatcgaatc ctcgtccatc caagttcttc tgggtcacaa tgatcaccta
     4921 cactgagtgt gtcattgtta tcaagtttgt ttgccaattt gcattcatgc cttacaattc
     4981 tatcacgtgg cgaacagagc atcaaatgga cccgatgtca ttggataagt tattcggagt
     5041 atcacagaga gatagttttg cactttggga cattgttttg ctcttctcac tcttcttcca
     5101 tcggtatatg ctcagaaagt tagggttatg gaaggatgcc aatttgacgg acacgttcac
     5161 tttgaaggaa gagcctcgat cggcgtcagg atcggacaca ggatcaccca agaaaattgc
     5221 tcaagagcca aaggttgttg taactcagtc agataccctt gaaggtacaa gtggaggaga
     5281 gatagtcata ccatctgatc caaatgcagt ttccaatatg gaagaattag actgcgaacc
     5341 tccgattcca gagaagcaaa gtggaccaat tggaagattc attcatcaat tattccatcc
     5401 aaaattccgt tacattcgtg atttgtatcc aataatgttt ggaatcgatg tgatatgctt
     5461 cctcatcatg acatttggat actcggcatt tggtgaagga ggttctggaa atgttttaga
     5521 tgatgtgaag gcttctcgta ttccggtaac acttgttgtt atgctcgttg gaatgactct
     5581 ggcaattatc attgatcgag cactctacct cagaaaatca gttgtcggaa agctaatcta
     5641 tcaagtctta atgattgctt tccttcacat ttgggtattc cttgttcttc caaatatgac
     5701 tcgtcgttct gcgatatcga atcacgttgc tcaagcattg tacgtcatca aatcgtgcta
     5761 tttccttgtg tctgcttggc agatccgaaa tggttatcct gaactttgta ttggaaatct
     5821 attaacacat tcatacggaa tgaccaatat gattgcattc aaagtattca tgaatattcc
     5881 attcctcttc gagcttcgta cagctattga ttggacatgg acagatactt caatgcctct
     5941 tttcgatttc ttcaatatgg aaaatttcta tgctcatata ttcaatatca agtgtgcccg
     6001 ccagttcgaa gctgcctatc cagctccaag agggattccc aaaggaaagt tggtcaagta
     6061 tatgatggga ttcccaatta tcattggagt cgttatcttc atcttttctc ctctattgct
     6121 ctggtcgcta ctcaatcaaa tcggaactat cagtatgcca gaaaaagtta cgttgaggat
     6181 ttcgattgaa ggatatccac cactttacga gatggaggca caaggaagta atcacgataa
     6241 cgctgaactt ggaatgataa aacctgatca attggcatct ttgaatcaag cattgacgga
     6301 tagttacacg acacgagaca ctaattctat tttaagatca agaatgtctg tatcatatct
     6361 gaaaggatac acatatgagg atattctgat tgtgcgattc cgtccagaat ctgaaattta
     6421 ttggccgatt tcacaggatt cgagaaatgc gatgatcgat aaattgagcc gaaacacgtc
     6481 agtcaatttt gaagtatctc tggaattcac tcggccatat gatccaaatg aaaacgctgc
     6541 tttaaaacat tcgaaatcgt ggcttgttcc aatctccctg gatatgacga ttcgagcaaa
     6601 aattcaaagt gctctccgag gagatccagg tcatccgatt ctcattccac agtcaattcc
     6661 tgcgtttatt caagttccaa atcaaggaga attgaccctt ccaacatcaa tcggaaatac
     6721 tattatcaat gacggaaatc cacggattaa tacgaccggg atggaaaaat cagacgaagc
     6781 tcgggcttgg ttcgactcgt taaccttgaa tctcgaacaa ggaaaatcgc aaaacgagaa
     6841 aatgtggatc gccacatccg aacatccagg agaccaaaat gcgaaactct ggataaagac
     6901 tgcaaatacg acgtattcgg gaaggccgta ccttcaagtt gtcggattta ttgatagagc
     6961 attcccatca tttttggcga aagttttcaa aggaggagtc attgcagtgt atctttcagt
     7021 tatcctcgtc gttggaagag gtctggttcg tggaatcttc accacatctc caagcactgt
     7081 catgttcaca gaattaccga atgcggatca tcttctcaaa atttgtctcg acatctattt
     7141 ggttcgagaa gcgaaggact tcatgttgga gcaggatctc ttcgccaaat taatattcct
     7201 gttccgatca ccagcgacac tcatcgaatg gacacgaatg agcaaaaaga agcaagaata
     7261 aatttaaata tttcactgtc aaatattctg cgaaccgaac catcgttaat cattttattt
     7321 tttactttct ctgtttctca tcgaaaagac caaaaacctg aaaatattcc caccatttcc
     7381 ttttttttct ttccgtctct ggtactttac gagttgtttc ccctttctct ctcactgctc
     7441 gcctgattag gtcacactat tttcaatttt tggaaccaca tattatatgt ctatgtattg
     7501 ttagattcct tctctctctc tccttctttt cgggttttct tttctatttc cattttgagt
     7561 tttttctttt cgtttcttgt ttacttttta cgattctgta aatgacgaag aatattttaa
     7621 taaattttct attttt
//