Dbfetch

LOCUS       NM_001270047            1487 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans Inward rectifier potassium channel irk-1
            (irk-2), partial mRNA.
ACCESSION   NM_001270047
VERSION     NM_001270047.4
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 1487)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1487)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 1487)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003284).
            
            On Apr 15, 2020 this sequence version replaced NM_001270047.3.
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="X"
     gene            <1..1487
                     /gene="irk-2"
                     /locus_tag="CELE_M02A10.2"
                     /db_xref="GeneID:191695"
                     /db_xref="WormBase:WBGene00002150"
     CDS             1..1386
                     /gene="irk-2"
                     /locus_tag="CELE_M02A10.2"
                     /standard_name="M02A10.2b"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="Inward rectifier potassium channel irk-1"
                     /protein_id="NP_001256976.2"
                     /db_xref="EnsemblGenomes-Gn:WBGene00002150"
                     /db_xref="EnsemblGenomes-Tr:M02A10.2b"
                     /db_xref="GeneID:191695"
                     /db_xref="GOA:D3YT08"
                     /db_xref="InterPro:IPR013518"
                     /db_xref="InterPro:IPR014756"
                     /db_xref="InterPro:IPR016449"
                     /db_xref="InterPro:IPR040445"
                     /db_xref="InterPro:IPR041647"
                     /db_xref="UniProtKB/TrEMBL:D3YT08"
                     /db_xref="WormBase:WBGene00002150"
                     /translation="MLDIEEPLVKNKKYPFFKTPRLGGSRRIRNRLVQKQGLCNISLK
                     NVPKQRRKYFSDIFTTVIEMKWRWCLLYFSLSFMISWSFFATVYFLIAKQHGDIEQIA
                     NATWTPCIVNVHNELNAFLFSFTTQTTIGYGFRYPTDACPLTIVTMCFQFMWGVMTQT
                     LMAGIIFSKLARPIKRAATLIFSKNAVICLRDGKLCLLFRVGDMRKSSLAEAHVRLQM
                     IKRCVTYEGELLPFHQFDMDVGYDQGLDRVFVIWPITICHEIDERSPLWEIGADDLKS
                     AKFEIIAILEGVVESVGSTTQARTSYLPSEILWGHRFEKLVHYKKENGQYNIDFGKFH
                     NVYSVNTPTCSAAEIERLRSEGIFNESEYQMYPPSDNKLNLLDNDEMSPVRDSIDLNQ
                     IQILRRDSDEDPDAGEESMELVDLGIHHKCSIRSQSPIINSTSHLLQPMHKNSCSVRR
                     GSSTLNVSLHG"
ORIGIN      
        1 atgttggaca ttgaggagcc gttggttaaa aacaagaaat acccgttttt caaaacgccc
       61 agacttggcg ggtcacgacg gatacgcaat cggttggtac agaagcaggg tctctgcaac
      121 atcagtttga aaaatgtacc aaaacaaagg aggaaatatt tttctgacat tttcacgaca
      181 gtcattgaaa tgaaatggag atggtgcttg ctgtactttt cattgtcttt catgatcagt
      241 tggtcattct ttgcaacagt atacttcctt attgcaaaac agcatggaga tatcgaacag
      301 attgcaaatg caacatggac accgtgtatt gtgaatgtgc acaatgagct caatgcgttt
      361 ttattctcat tcacaactca aaccactatt ggttacgggt tcaggtaccc aacagacgca
      421 tgtcctttga caattgtcac aatgtgcttc cagttcatgt ggggtgttat gactcagact
      481 ttaatggctg gtattatctt ctccaagctg gcaagaccca tcaaacgtgc agcaactctg
      541 atattctcca aaaatgcggt aatatgtctg cgagatggga aactgtgtct gttatttcga
      601 gttggtgaca tgagaaagtc aagtttggcg gaagcgcatg ttcggttgca gatgatcaaa
      661 cgatgtgtga cgtacgaagg ggaattgttg ccttttcatc agtttgacat ggatgtcggg
      721 tatgatcaag ggcttgacag agtttttgtc atttggccaa tcacgatatg ccatgaaatt
      781 gatgaaagga gcccgctttg ggagattgga gcagatgatt taaaaagcgc aaaatttgag
      841 attattgcaa ttttggaagg agtggtggaa agcgtcggtt caactaccca agcacggaca
      901 agctaccttc cgtcggaaat attatggggg cacaggtttg aaaaactggt gcactacaag
      961 aaggaaaatg gccagtataa cattgacttt ggcaaatttc acaacgtgta ctctgtaaat
     1021 accccgacat gctcagcagc ggaaattgaa aggcttaggt cagaagggat attcaacgag
     1081 tcggagtacc aaatgtaccc accgtcagac aataagctca atcttcttga taatgatgaa
     1141 atgtcaccgg ttcgcgactc gatagatctc aatcagatac aaattttgcg aagagacagt
     1201 gatgaagacc ctgatgctgg agaggaaagt atggaattgg ttgaccttgg aattcaccac
     1261 aagtgctcaa ttcgctctca atctcccatc atcaactcga cctctcacct tcttcagcca
     1321 atgcacaaga actcttgttc cgttcgaaga ggctcatcaa ctctgaatgt cagtctacat
     1381 ggataataat atcttcaatg ccctttcata catttctgtg attgttctat gcatttttgt
     1441 tctttctctt tgtttctcaa catttgaatt gtaaataacg cgggttt
//