Dbfetch
LOCUS NM_001269334 1233 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Neurexin-3-beta (nrx-1), partial mRNA.
ACCESSION NM_001269334
VERSION NM_001269334.3
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1233)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1233)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1233)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1233)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003283).
On Apr 15, 2020 this sequence version replaced NM_001269334.2.
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..1233
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="V"
gene <1..>1233
/gene="nrx-1"
/locus_tag="CELE_C29A12.4"
/db_xref="GeneID:179503"
/db_xref="WormBase:WBGene00007799"
CDS 1..1233
/gene="nrx-1"
/locus_tag="CELE_C29A12.4"
/standard_name="C29A12.4c"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Neurexin-3-beta"
/protein_id="NP_001256263.1"
/db_xref="EnsemblGenomes-Gn:WBGene00007799"
/db_xref="EnsemblGenomes-Tr:C29A12.4c"
/db_xref="GeneID:179503"
/db_xref="GOA:E1B6S5"
/db_xref="UniProtKB/TrEMBL:E1B6S5"
/db_xref="WormBase:WBGene00007799"
/translation="MMMAHSIDENPNEALIESLAPSCLSLEEQQSCFIDTDDSTGFFS
PVLPTVANFPTTRQTEPETTRRPLSPSKMTPSLPSPTTTTLPVFFLSQITDGDESEDE
FDGSGDDLFGGDGVGITAATQPSVKRTTSISVVTKVLTTTSEPSSTHRSTVLPRPYAS
VKEAAEQNPDYLGASIWNQVDTLPEPMVTGPAWRTNKSLTTTATTEASSTKSNRKTTT
TTTTSATTTIRIQQRPNYDIDNEVTALITSSLAPQKTRPKSTPHFTVYPVRPTTPMGD
TITTTMQAATVTDFPRTPLIMCSSLAVIIAIAAVVFFVFKCRQNPPNSEHYTMAMKSQ
SGYTAIAPELSPPMNHDRSNDSCTQPLLAKPHINGNGYEPLKGAVIANGNGATATMMR
NGNGNGVAKKKDFKEWYV"
ORIGIN
1 atgatgatgg cacattccat cgatgagaat ccaaacgaag cactcatcga gtcattggct
61 cccagctgtc taagtcttga agaacaacag tcgtgcttca ttgatactga cgattcaaca
121 ggattcttct cgccagtcct tccaactgtt gccaactttc caactacaag acagactgaa
181 ccagaaacta cgcggagacc tctgtcgcct tcaaaaatga caccttctct tccttctcct
241 accaccacca ctttgcctgt tttctttttg tcacaaatca ctgacggcga tgaatcagaa
301 gatgaatttg acggctccgg tgacgatctc tttggtggag atggtgtcgg aataacagcc
361 gcaacacaac cgtcggtgaa gcgtaccacg tcgatttctg ttgtaacaaa agtactaaca
421 accacttctg aacctagcag cacgcatcgt tcgacggttc ttcctagacc gtatgcgagt
481 gtgaaagagg ccgctgagca gaatccagat tatttgggag caagtatttg gaatcaagtg
541 gatactttac ctgaacctat ggtcacagga cctgcatgga gaacaaataa gtctttgact
601 acaacagcaa caactgaagc ttcttcaaca aaaagtaatc gaaagaccac cacgacgaca
661 acgacgtcag caacgactac aattcgtatc caacaacgac caaattacga tattgataac
721 gaagttactg ctctaataac aagtagtttg gcaccacaaa agacacgccc aaagtcaacg
781 cctcacttca cagtatatcc agtaagacct acaacgccta tgggagatac gatcacaaca
841 acaatgcagg ccgccacagt aaccgatttc ccacgaactc cactgatcat gtgctccagt
901 ttggcagtaa ttattgccat tgctgcagtc gtgttctttg ttttcaaatg cagacaaaat
961 ccgccaaact ctgaacacta caccatggct atgaaatctc aatcaggcta tacagcaatt
1021 gctcctgaac tttcacctcc catgaaccat gaccggagca acgattcatg tacacaacca
1081 ttacttgcaa aaccacacat caacggaaac ggttatgaac cgctgaaagg cgcggtaata
1141 gccaatggaa atggagcaac ggccacaatg atgagaaacg gaaacgggaa tggggtggca
1201 aagaaaaagg attttaaaga gtggtacgta taa
//