Dbfetch
LOCUS NM_001268459 7640 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Piezo-type mechanosensitive ion channel
component 1 (pezo-1), mRNA.
ACCESSION NM_001268459
VERSION NM_001268459.3
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 7640)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 7640)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 7640)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 7640)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003282).
On Sep 4, 2019 this sequence version replaced NM_001268459.2.
FEATURES Location/Qualifiers
source 1..7640
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="IV"
gene 1..7640
/gene="pezo-1"
/locus_tag="CELE_C10C5.1"
/db_xref="GeneID:182492"
/db_xref="WormBase:WBGene00007505"
CDS 57..7265
/gene="pezo-1"
/locus_tag="CELE_C10C5.1"
/standard_name="C10C5.1d"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Piezo-type mechanosensitive ion channel
component 1"
/protein_id="NP_001255388.2"
/db_xref="EnsemblGenomes-Gn:WBGene00007505"
/db_xref="EnsemblGenomes-Tr:C10C5.1d"
/db_xref="GeneID:182492"
/db_xref="GOA:H9G2S2"
/db_xref="InterPro:IPR027272"
/db_xref="InterPro:IPR031334"
/db_xref="InterPro:IPR031805"
/db_xref="UniProtKB/TrEMBL:H9G2S2"
/db_xref="WormBase:WBGene00007505"
/translation="MTVPPLLKSCVVKLLLPAALLAAAIIRPSFLSIGYVLLALVSAV
LPPIRKSLALPKLVGTFVIITFLFCLAVALGVGSYQISEQVVHKNDRTYICNRSDTTL
FRSIGLVRFHPTGTFESTRAFLPEIIATSAALLTIIIVMFLSHRDEQLDVVGDVVTVR
SESGREQRRQRKLAAIMWSAIGNSLRRLTNFVLFLFTAYVGIVKPSLSNSIYFLAFLF
ISTWWSTYTPLRHGVYNQIKKFLIFYSALHFLVLYTYQIPIVHHSWLPTGSFLPRLFG
LTVLMDSSCPEWWKFPFVAPDFNDDDLIMKWPLYANPIVVLVFFYLTVAQYKFTRNGS
REYIDDNEYGSSVHEELLSNASSSANDDEQGRARSRSPLRNGEEQGSIPLRKVTSQVV
DRNKLSNIFNTTAPGDKESAASKGMIAVMTFVIFHSYSIALTAMMTWALLYHSIFGLI
LLILTCILWIFRDTRKSSFAMAPIILMYIEFLLILQYFLSMDIHAEIGDPAWMNFVGI
EWTTLPVHAVIILCVQTLLTLPVFLLLRLARREKFYESLSDYERQRRINSYGTFGASK
TGAGGVAVAKDPKSRKFAAFVEYLSNKVSVYFIFVVSVVLLVVSTCFAPNFYNILFFA
LWALNLIYLKFSFRLYRGLAYAFWLTLTFYTSIVIIALYIYQFPGVSQWIIRNTSLSQ
EWLNAIGLVDFRAIGESGALFLQLLAPIALFVVTMLQLKFFHGPWSRATSPRRAENDP
PTSTTEAAAVASTSGTQGRAHAAGDTLVKKLHKLANQTIELLWRFFEVHISKIVFVII
AIFIANNINALYIPLVILLSLAICLPSAADGIFSLFMCAYLFLVALSKMIYQLDIVPE
LSQIDRGVGADNCSHGNISMPEWFGLKKEVEGTEPIYMLFGVIVSIIALAFQSIVIYR
QRHYRASLGLPESMRAKVFPDFHHSHFDRSLKNAIQFLIDYGFYKFGLEITMIAIGID
IFNRMDALAAIQCFWLVLFALNKRVFVRRIWVFYVIYMAILYPLQFFSYVGLPPDSCI
EYPWSYWIPSYSDDARFNLSYLLNLSIYGVNWPSAYLIGDFFVLLLASCQLAVFRREG
EDNDSIYNDGNFVIKPENPQYDFIDTKKSYVDYFKSFVFHYGHWITLMSTLAAGIAGT
SLFALGYIIFTLTMLWSGNNLYVMNSTLRSFEHTLKRWNALLGYTLFTITMKVCLQIF
GCVFLSWFDQSGGWGKTLCIVRQLFSITCVNNECHVLKELEDFSKACAVETKEGNIGF
DVIALSFLVFQIRIFHSWYFQHCMVEYRSEVILANRGAVLKNQLIEKEMKEQNEQQKA
KFNDIRRRTEAIRERYQKQIERGAAERDFEPVTYGHAKRAGDYYMFKYDPENDDLVEP
VDSFVPEVDPKATAYDRLDPGQIMYAATAHDLDLAKTVQQVKKGDTIKDPDSRALIAV
SEPEARKPGGTEETDGDEDEDNKDSKVESTAKFIQKMIASALDLCSVTLNKLCREHRY
VGFVLSKEKQKLKSGHSESLSNTSRKLTDIRSAVDLPSLQLVQSANDVEKMETAVSVD
WQQKSSATRLLNAVVNCIGAHTDILCYFFAIMTQVMTGGLITLPLPLMSLFWGNLSNP
RPSKFFWVTMITYTECVIVIKFVCQFAFMPYNSITWRTEHQMDPMSLDKLFGVSQRDS
FALWDIVLLFSLFFHRYMLRKLGLWKDANLTDTFTLKEEPRSASGSDTGSPKKIAQEP
KVVVTQSDTLEGTSGGEIVIPSDPNAVSNMEELDCEPPIPEKQSGPIGRFIHQLFHPK
FRYIRDLYPIMFGIDVICFLIMTFGYSAFGEGGSGNVLDDVKASRIPVTLVVMLVGMT
LAIIIDRALYLRKSVVGKLIYQVLMIAFLHIWVFLVLPNMTRRSAISNHVAQALYVIK
SCYFLVSAWQIRNGYPELCIGNLLTHSYGMTNMIAFKVFMNIPFLFELRTAIDWTWTD
TSMPLFDFFNMENFYAHIFNIKCARQFEAAYPAPRGIPKGKLVKYMMGFPIIIGVVIF
IFSPLLLWSLLNQIGTISMPEKVTLRISIEGYPPLYEMEAQGSNHDNAELGMIKPDQL
ASLNQALTDSYTTRDTNSILRSRMSVSYLKGYTYEDILIVRFRPESEIYWPISQDSRN
AMIDKLSRNTSVNFEVSLEFTRPYDPNENAALKHSKSWLVPISLDMTIRAKIQSALRG
DPGHPILIPQSIPAFIQVPNQGELTLPTSIGNTIINDGNPRINTTGMEKSDEARAWFD
SLTLNLEQGKSQNEKMWIATSEHPGDQNAKLWIKTANTTYSGRPYLQVVGFIDRAFPS
FLAKVFKGGVIAVYLSVILVVGRGLVRGIFTTSPSTVMFTELPNADHLLKICLDIYLV
REAKDFMLEQDLFAKLIFLFRSPATLIEWTRMSKKKQE"
ORIGIN
1 tttcagaatc acatgcggta aatctgaatc ggtggtcgta acacagcaac aacagaatga
61 cggtcccgcc gcttttaaaa tcgtgcgtcg tcaaattgct gcttccggca gcactgcttg
121 cagctgccat aatccggccg agctttttat caattggcta cgtcctactt gcacttgtca
181 gcgccgttct gccaccaatt cgaaagtctt tagcacttcc caaactagtt ggaacattcg
241 ttattatcac ttttctcttc tgcctagcag tcgcactagg agttggttcc taccagatct
301 cagaacaagt tgttcataaa aatgaccgga catacatttg caatcgatcc gacactactc
361 tgttccggag cattggcctt gtccgattcc atccaacagg aacatttgaa tcaactcgag
421 catttcttcc ggagattatt gccacgtctg cagctctgct cactatcata atcgtcatgt
481 ttttgtcgca tagagacgag caattggacg tcgttggtga tgttgtaaca gtcaggagtg
541 aatctggccg cgagcaacga cgacaaagaa agttagccgc tataatgtgg agtgcaatcg
601 gaaattctct acgaagattg actaatttcg tgcttttcct gttcacggca tatgttggaa
661 tcgtgaaacc atcgctgagt aactcaattt actttctcgc ttttctgttc atatccacgt
721 ggtggtccac atacacacca ctgagacatg gagtgtacaa tcagataaag aagtttctca
781 tattctactc ggcgcttcat ttcttggttc tctacacata tcaaattccg atcgttcacc
841 actcatggct gccgaccggt tcatttctgc cacgtctgtt cggacttact gtactcatgg
901 attcatcatg tcccgaatgg tggaagtttc catttgtagc tccagacttt aacgatgatg
961 atttgattat gaaatggccg ttgtatgcaa atccgattgt tgtactggtg ttcttctacc
1021 tcacagttgc tcaatacaaa ttcacgagaa acggatctcg tgaatatatc gatgataacg
1081 aatatgggtc atcagttcac gaagaacttc tgtccaatgc atcctcctct gctaatgatg
1141 atgaacaggg tcgagctcgt tcgcgatctc cgctgcgaaa tggtgaagaa caaggctcaa
1201 tcccactacg gaaagttact tcgcaagttg ttgataggaa taagttgagc aacattttta
1261 atactacagc acccggagat aaggaatctg ctgcttcgaa aggaatgatt gcagtcatga
1321 catttgtcat tttccattcg tattcaatcg cgctgactgc tatgatgaca tgggctctcc
1381 tctatcattc gatattcggt ctcattctcc tcatcctcac atgtatcttg tggatcttcc
1441 gtgatacgag aaagtcatcg tttgcaatgg cccctattat tttgatgtat atcgagtttc
1501 tattgattct tcaatatttc ctcagtatgg atattcatgc agaaattggc gatccagcgt
1561 ggatgaactt tgttggaatc gaatggacta ctcttccagt acatgctgtc atcattctct
1621 gtgtccagac tcttctcact ctcccagtgt tcttgcttct acgtttggct cgcagggaga
1681 agttttacga atcgctgagt gattatgaac gacaacgacg aatcaactca tatggaacat
1741 ttggagcatc aaagactgga gctgggggtg ttgcagtggc taaggatcca aaaagtcgga
1801 agttcgcggc atttgtggaa tatctgtcga ataaagtgtc tgtctacttc atatttgtag
1861 tatcagtggt acttttggtg gtctctacgt gttttgctcc gaatttctac aatattctat
1921 tcttcgcact atgggcattg aacttgattt atctcaagtt ctcattccgt ctgtatcgtg
1981 gattggcata tgcattctgg ctaactctca cgttctacac ttcaattgtt attatcgccc
2041 tctacattta tcagttccct ggagtatctc aatggattat tcgaaatact agtttgtcgc
2101 aggagtggct gaatgcaatt ggacttgtcg attttagagc tatcggtgaa tcgggagccc
2161 tatttctaca attactcgcc ccaattgcct tgttcgtcgt cacaatgctc caactcaagt
2221 ttttccatgg accatggagt cgagcaacgt caccaagaag agcagaaaat gatccaccta
2281 caagtacgac ggaggctgcg gcggtagcaa gcacatctgg aacacaagga agagcacatg
2341 ctgcaggcga tacccttgtc aagaagctgc acaaattggc aaatcagaca atcgaactgt
2401 tatggaggtt tttcgaagtt cacatttcga aaattgtctt tgtcatcatt gcgattttta
2461 ttgccaacaa tatcaatgct ctatacattc cacttgttat tctcctctca ttggctatat
2521 gtctaccatc agctgcagat gggatattct ctttatttat gtgtgcctac ttattcctcg
2581 tggcactgag caagatgatc taccaactgg atattgttcc cgagttatca caaatcgacc
2641 gaggagttgg agcagataac tgttcacatg gaaatatttc aatgcctgaa tggtttggat
2701 tgaagaagga agttgaagga actgaaccaa tttatatgct ctttggagtc attgtttcga
2761 ttattgcatt ggcttttcaa tcaattgtta tatatcgaca aagacattat cgagcttcac
2821 tgggacttcc tgaatcgatg cgagctaaag tgttcccgga cttccatcat tctcattttg
2881 atagatctct caaaaatgcc atccaattct tgatagacta tggtttctat aagtttggac
2941 ttgaaatcac gatgatcgcc attggaattg acattttcaa tcgaatggat gcattggcag
3001 cgattcaatg tttctggctt gtcctgtttg cgctcaataa aagagtcttt gttcgaagaa
3061 tatgggtatt ctatgtgatc tatatggcga ttctgtatcc acttcagttc ttttcatatg
3121 ttggattacc acctgacagt tgtattgagt atccatggtc gtattggatt ccatcgtata
3181 gtgatgatgc gagattcaat ctgtcgtatc ttctgaactt gtcaatatac ggtgtaaact
3241 ggccatcagc atatctcatt ggcgatttct tcgtactcct cttggcatca tgccaattag
3301 cagttttccg gcgagaagga gaagataatg attcaattta caatgatgga aactttgtga
3361 ttaagccaga aaatccacaa tatgacttta ttgacaccaa aaagagttac gttgattatt
3421 tcaaatcatt cgttttccat tatggacact ggattacatt gatgtctaca ctagcagcag
3481 gaattgctgg aacgtcactt tttgctttgg gatacattat attcactctg acaatgctgt
3541 ggtctggtaa caatttgtat gtgatgaact caactctacg atcatttgaa catactttga
3601 aacgatggaa tgcacttttg ggatacacat tgttcacgat tacaatgaaa gtttgccttc
3661 aaatatttgg atgtgtattc ctgtcgtggt tcgatcaatc tggtggatgg ggaaagactc
3721 tgtgcatcgt tcgtcaactc ttcagtatca catgtgttaa taacgaatgt catgtgctca
3781 aagagctgga ggatttctcg aaggcgtgtg ctgttgagac gaaagaagga aatattggat
3841 ttgatgtgat tgcgctatcc ttcctcgtct tccaaatccg aattttccat tcttggtatt
3901 tccaacactg catggttgaa tatcgaagtg aggttattct ggccaataga ggtgccgtgc
3961 tgaagaatca actgattgaa aaggaaatga aggaacaaaa cgagcagcaa aaagccaagt
4021 tcaatgatat cagaagaaga actgaagcta ttcgtgaaag atatcaaaaa caaatcgaac
4081 gaggagctgc tgaacgtgac ttcgagccgg ttacttatgg gcacgccaaa cgagcgggag
4141 actactacat gttcaaatac gatcctgaaa atgatgatct tgtggaaccc gtcgacagtt
4201 ttgtaccaga agttgatccc aaggcaactg catatgatcg acttgatcct ggacagataa
4261 tgtacgctgc caccgctcac gacctcgacc tcgccaaaac tgtacagcaa gtcaagaaag
4321 gcgatactat caaagatcct gattcacgtg ctcttatcgc tgtttctgaa ccagaagctc
4381 gtaagccagg aggcactgaa gaaacggatg gtgatgaaga tgaggataat aaggattcga
4441 aagtggaaag tactgctaaa ttcattcaaa aaatgatcgc ttctgccttg gacttgtgta
4501 gtgtaacact aaacaaactg tgcagagaac accgatatgt tggatttgtt ttgagcaagg
4561 aaaaacaaaa gttgaagtca ggacactcgg aatctctttc aaatacatct agaaagctga
4621 cggatattcg atctgcagtt gatctaccaa gtcttcaact tgtgcaatcg gcgaatgatg
4681 ttgaaaagat ggagacagcc gtcagcgtgg attggcaaca aaaatcatca gcaacgagac
4741 tattgaatgc agttgtgaat tgtattggag cacacactga tattctctgc tacttcttcg
4801 caattatgac acaagtgatg actggtggac ttattactct tccacttcct ctgatgtcac
4861 tattctgggg aaatctatcg aatcctcgtc catccaagtt cttctgggtc acaatgatca
4921 cctacactga gtgtgtcatt gttatcaagt ttgtttgcca atttgcattc atgccttaca
4981 attctatcac gtggcgaaca gagcatcaaa tggacccgat gtcattggat aagttattcg
5041 gagtatcaca gagagatagt tttgcacttt gggacattgt tttgctcttc tcactcttct
5101 tccatcggta tatgctcaga aagttagggt tatggaagga tgccaatttg acggacacgt
5161 tcactttgaa ggaagagcct cgatcggcgt caggatcgga cacaggatca cccaagaaaa
5221 ttgctcaaga gccaaaggtt gttgtaactc agtcagatac ccttgaaggt acaagtggag
5281 gagagatagt cataccatct gatccaaatg cagtttccaa tatggaagaa ttagactgcg
5341 aacctccgat tccagagaag caaagtggac caattggaag attcattcat caattattcc
5401 atccaaaatt ccgttacatt cgtgatttgt atccaataat gtttggaatc gatgtgatat
5461 gcttcctcat catgacattt ggatactcgg catttggtga aggaggttct ggaaatgttt
5521 tagatgatgt gaaggcttct cgtattccgg taacacttgt tgttatgctc gttggaatga
5581 ctctggcaat tatcattgat cgagcactct acctcagaaa atcagttgtc ggaaagctaa
5641 tctatcaagt cttaatgatt gctttccttc acatttgggt attccttgtt cttccaaata
5701 tgactcgtcg ttctgcgata tcgaatcacg ttgctcaagc attgtacgtc atcaaatcgt
5761 gctatttcct tgtgtctgct tggcagatcc gaaatggtta tcctgaactt tgtattggaa
5821 atctattaac acattcatac ggaatgacca atatgattgc attcaaagta ttcatgaata
5881 ttccattcct cttcgagctt cgtacagcta ttgattggac atggacagat acttcaatgc
5941 ctcttttcga tttcttcaat atggaaaatt tctatgctca tatattcaat atcaagtgtg
6001 cccgccagtt cgaagctgcc tatccagctc caagagggat tcccaaagga aagttggtca
6061 agtatatgat gggattccca attatcattg gagtcgttat cttcatcttt tctcctctat
6121 tgctctggtc gctactcaat caaatcggaa ctatcagtat gccagaaaaa gttacgttga
6181 ggatttcgat tgaaggatat ccaccacttt acgagatgga ggcacaagga agtaatcacg
6241 ataacgctga acttggaatg ataaaacctg atcaattggc atctttgaat caagcattga
6301 cggatagtta cacgacacga gacactaatt ctattttaag atcaagaatg tctgtatcat
6361 atctgaaagg atacacatat gaggatattc tgattgtgcg attccgtcca gaatctgaaa
6421 tttattggcc gatttcacag gattcgagaa atgcgatgat cgataaattg agccgaaaca
6481 cgtcagtcaa ttttgaagta tctctggaat tcactcggcc atatgatcca aatgaaaacg
6541 ctgctttaaa acattcgaaa tcgtggcttg ttccaatctc cctggatatg acgattcgag
6601 caaaaattca aagtgctctc cgaggagatc caggtcatcc gattctcatt ccacagtcaa
6661 ttcctgcgtt tattcaagtt ccaaatcaag gagaattgac ccttccaaca tcaatcggaa
6721 atactattat caatgacgga aatccacgga ttaatacgac cgggatggaa aaatcagacg
6781 aagctcgggc ttggttcgac tcgttaacct tgaatctcga acaaggaaaa tcgcaaaacg
6841 agaaaatgtg gatcgccaca tccgaacatc caggagacca aaatgcgaaa ctctggataa
6901 agactgcaaa tacgacgtat tcgggaaggc cgtaccttca agttgtcgga tttattgata
6961 gagcattccc atcatttttg gcgaaagttt tcaaaggagg agtcattgca gtgtatcttt
7021 cagttatcct cgtcgttgga agaggtctgg ttcgtggaat cttcaccaca tctccaagca
7081 ctgtcatgtt cacagaatta ccgaatgcgg atcatcttct caaaatttgt ctcgacatct
7141 atttggttcg agaagcgaag gacttcatgt tggagcagga tctcttcgcc aaattaatat
7201 tcctgttccg atcaccagcg acactcatcg aatggacacg aatgagcaaa aagaagcaag
7261 aataaattta aatatttcac tgtcaaatat tctgcgaacc gaaccatcgt taatcatttt
7321 attttttact ttctctgttt ctcatcgaaa agaccaaaaa cctgaaaata ttcccaccat
7381 ttcctttttt ttctttccgt ctctggtact ttacgagttg tttccccttt ctctctcact
7441 gctcgcctga ttaggtcaca ctattttcaa tttttggaac cacatattat atgtctatgt
7501 attgttagat tccttctctc tctctccttc ttttcgggtt ttcttttcta tttccatttt
7561 gagttttttc ttttcgtttc ttgtttactt tttacgattc tgtaaatgac gaagaatatt
7621 ttaataaatt ttctattttt
//