Dbfetch
LOCUS NM_001268459 7640 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Piezo-type mechanosensitive ion channel component 1 (pezo-1), mRNA. ACCESSION NM_001268459 VERSION NM_001268459.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 7640) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 7640) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 7640) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 7640) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_001268459.2. FEATURES Location/Qualifiers source 1..7640 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene 1..7640 /gene="pezo-1" /locus_tag="CELE_C10C5.1" /db_xref="GeneID:182492" /db_xref="WormBase:WBGene00007505" CDS 57..7265 /gene="pezo-1" /locus_tag="CELE_C10C5.1" /standard_name="C10C5.1d" /note="Confirmed by transcript evidence" /codon_start=1 /product="Piezo-type mechanosensitive ion channel component 1" /protein_id="NP_001255388.2" /db_xref="EnsemblGenomes-Gn:WBGene00007505" /db_xref="EnsemblGenomes-Tr:C10C5.1d" /db_xref="GeneID:182492" /db_xref="GOA:H9G2S2" /db_xref="InterPro:IPR027272" /db_xref="InterPro:IPR031334" /db_xref="InterPro:IPR031805" /db_xref="UniProtKB/TrEMBL:H9G2S2" /db_xref="WormBase:WBGene00007505" /translation="MTVPPLLKSCVVKLLLPAALLAAAIIRPSFLSIGYVLLALVSAV LPPIRKSLALPKLVGTFVIITFLFCLAVALGVGSYQISEQVVHKNDRTYICNRSDTTL FRSIGLVRFHPTGTFESTRAFLPEIIATSAALLTIIIVMFLSHRDEQLDVVGDVVTVR SESGREQRRQRKLAAIMWSAIGNSLRRLTNFVLFLFTAYVGIVKPSLSNSIYFLAFLF ISTWWSTYTPLRHGVYNQIKKFLIFYSALHFLVLYTYQIPIVHHSWLPTGSFLPRLFG LTVLMDSSCPEWWKFPFVAPDFNDDDLIMKWPLYANPIVVLVFFYLTVAQYKFTRNGS REYIDDNEYGSSVHEELLSNASSSANDDEQGRARSRSPLRNGEEQGSIPLRKVTSQVV DRNKLSNIFNTTAPGDKESAASKGMIAVMTFVIFHSYSIALTAMMTWALLYHSIFGLI LLILTCILWIFRDTRKSSFAMAPIILMYIEFLLILQYFLSMDIHAEIGDPAWMNFVGI EWTTLPVHAVIILCVQTLLTLPVFLLLRLARREKFYESLSDYERQRRINSYGTFGASK TGAGGVAVAKDPKSRKFAAFVEYLSNKVSVYFIFVVSVVLLVVSTCFAPNFYNILFFA LWALNLIYLKFSFRLYRGLAYAFWLTLTFYTSIVIIALYIYQFPGVSQWIIRNTSLSQ EWLNAIGLVDFRAIGESGALFLQLLAPIALFVVTMLQLKFFHGPWSRATSPRRAENDP PTSTTEAAAVASTSGTQGRAHAAGDTLVKKLHKLANQTIELLWRFFEVHISKIVFVII AIFIANNINALYIPLVILLSLAICLPSAADGIFSLFMCAYLFLVALSKMIYQLDIVPE LSQIDRGVGADNCSHGNISMPEWFGLKKEVEGTEPIYMLFGVIVSIIALAFQSIVIYR QRHYRASLGLPESMRAKVFPDFHHSHFDRSLKNAIQFLIDYGFYKFGLEITMIAIGID IFNRMDALAAIQCFWLVLFALNKRVFVRRIWVFYVIYMAILYPLQFFSYVGLPPDSCI EYPWSYWIPSYSDDARFNLSYLLNLSIYGVNWPSAYLIGDFFVLLLASCQLAVFRREG EDNDSIYNDGNFVIKPENPQYDFIDTKKSYVDYFKSFVFHYGHWITLMSTLAAGIAGT SLFALGYIIFTLTMLWSGNNLYVMNSTLRSFEHTLKRWNALLGYTLFTITMKVCLQIF GCVFLSWFDQSGGWGKTLCIVRQLFSITCVNNECHVLKELEDFSKACAVETKEGNIGF DVIALSFLVFQIRIFHSWYFQHCMVEYRSEVILANRGAVLKNQLIEKEMKEQNEQQKA KFNDIRRRTEAIRERYQKQIERGAAERDFEPVTYGHAKRAGDYYMFKYDPENDDLVEP VDSFVPEVDPKATAYDRLDPGQIMYAATAHDLDLAKTVQQVKKGDTIKDPDSRALIAV SEPEARKPGGTEETDGDEDEDNKDSKVESTAKFIQKMIASALDLCSVTLNKLCREHRY VGFVLSKEKQKLKSGHSESLSNTSRKLTDIRSAVDLPSLQLVQSANDVEKMETAVSVD WQQKSSATRLLNAVVNCIGAHTDILCYFFAIMTQVMTGGLITLPLPLMSLFWGNLSNP RPSKFFWVTMITYTECVIVIKFVCQFAFMPYNSITWRTEHQMDPMSLDKLFGVSQRDS FALWDIVLLFSLFFHRYMLRKLGLWKDANLTDTFTLKEEPRSASGSDTGSPKKIAQEP KVVVTQSDTLEGTSGGEIVIPSDPNAVSNMEELDCEPPIPEKQSGPIGRFIHQLFHPK FRYIRDLYPIMFGIDVICFLIMTFGYSAFGEGGSGNVLDDVKASRIPVTLVVMLVGMT LAIIIDRALYLRKSVVGKLIYQVLMIAFLHIWVFLVLPNMTRRSAISNHVAQALYVIK SCYFLVSAWQIRNGYPELCIGNLLTHSYGMTNMIAFKVFMNIPFLFELRTAIDWTWTD TSMPLFDFFNMENFYAHIFNIKCARQFEAAYPAPRGIPKGKLVKYMMGFPIIIGVVIF IFSPLLLWSLLNQIGTISMPEKVTLRISIEGYPPLYEMEAQGSNHDNAELGMIKPDQL ASLNQALTDSYTTRDTNSILRSRMSVSYLKGYTYEDILIVRFRPESEIYWPISQDSRN AMIDKLSRNTSVNFEVSLEFTRPYDPNENAALKHSKSWLVPISLDMTIRAKIQSALRG DPGHPILIPQSIPAFIQVPNQGELTLPTSIGNTIINDGNPRINTTGMEKSDEARAWFD SLTLNLEQGKSQNEKMWIATSEHPGDQNAKLWIKTANTTYSGRPYLQVVGFIDRAFPS FLAKVFKGGVIAVYLSVILVVGRGLVRGIFTTSPSTVMFTELPNADHLLKICLDIYLV REAKDFMLEQDLFAKLIFLFRSPATLIEWTRMSKKKQE" ORIGIN 1 tttcagaatc acatgcggta aatctgaatc ggtggtcgta acacagcaac aacagaatga 61 cggtcccgcc gcttttaaaa tcgtgcgtcg tcaaattgct gcttccggca gcactgcttg 121 cagctgccat aatccggccg agctttttat caattggcta cgtcctactt gcacttgtca 181 gcgccgttct gccaccaatt cgaaagtctt tagcacttcc caaactagtt ggaacattcg 241 ttattatcac ttttctcttc tgcctagcag tcgcactagg agttggttcc taccagatct 301 cagaacaagt tgttcataaa aatgaccgga catacatttg caatcgatcc gacactactc 361 tgttccggag cattggcctt gtccgattcc atccaacagg aacatttgaa tcaactcgag 421 catttcttcc ggagattatt gccacgtctg cagctctgct cactatcata atcgtcatgt 481 ttttgtcgca tagagacgag caattggacg tcgttggtga tgttgtaaca gtcaggagtg 541 aatctggccg cgagcaacga cgacaaagaa agttagccgc tataatgtgg agtgcaatcg 601 gaaattctct acgaagattg actaatttcg tgcttttcct gttcacggca tatgttggaa 661 tcgtgaaacc atcgctgagt aactcaattt actttctcgc ttttctgttc atatccacgt 721 ggtggtccac atacacacca ctgagacatg gagtgtacaa tcagataaag aagtttctca 781 tattctactc ggcgcttcat ttcttggttc tctacacata tcaaattccg atcgttcacc 841 actcatggct gccgaccggt tcatttctgc cacgtctgtt cggacttact gtactcatgg 901 attcatcatg tcccgaatgg tggaagtttc catttgtagc tccagacttt aacgatgatg 961 atttgattat gaaatggccg ttgtatgcaa atccgattgt tgtactggtg ttcttctacc 1021 tcacagttgc tcaatacaaa ttcacgagaa acggatctcg tgaatatatc gatgataacg 1081 aatatgggtc atcagttcac gaagaacttc tgtccaatgc atcctcctct gctaatgatg 1141 atgaacaggg tcgagctcgt tcgcgatctc cgctgcgaaa tggtgaagaa caaggctcaa 1201 tcccactacg gaaagttact tcgcaagttg ttgataggaa taagttgagc aacattttta 1261 atactacagc acccggagat aaggaatctg ctgcttcgaa aggaatgatt gcagtcatga 1321 catttgtcat tttccattcg tattcaatcg cgctgactgc tatgatgaca tgggctctcc 1381 tctatcattc gatattcggt ctcattctcc tcatcctcac atgtatcttg tggatcttcc 1441 gtgatacgag aaagtcatcg tttgcaatgg cccctattat tttgatgtat atcgagtttc 1501 tattgattct tcaatatttc ctcagtatgg atattcatgc agaaattggc gatccagcgt 1561 ggatgaactt tgttggaatc gaatggacta ctcttccagt acatgctgtc atcattctct 1621 gtgtccagac tcttctcact ctcccagtgt tcttgcttct acgtttggct cgcagggaga 1681 agttttacga atcgctgagt gattatgaac gacaacgacg aatcaactca tatggaacat 1741 ttggagcatc aaagactgga gctgggggtg ttgcagtggc taaggatcca aaaagtcgga 1801 agttcgcggc atttgtggaa tatctgtcga ataaagtgtc tgtctacttc atatttgtag 1861 tatcagtggt acttttggtg gtctctacgt gttttgctcc gaatttctac aatattctat 1921 tcttcgcact atgggcattg aacttgattt atctcaagtt ctcattccgt ctgtatcgtg 1981 gattggcata tgcattctgg ctaactctca cgttctacac ttcaattgtt attatcgccc 2041 tctacattta tcagttccct ggagtatctc aatggattat tcgaaatact agtttgtcgc 2101 aggagtggct gaatgcaatt ggacttgtcg attttagagc tatcggtgaa tcgggagccc 2161 tatttctaca attactcgcc ccaattgcct tgttcgtcgt cacaatgctc caactcaagt 2221 ttttccatgg accatggagt cgagcaacgt caccaagaag agcagaaaat gatccaccta 2281 caagtacgac ggaggctgcg gcggtagcaa gcacatctgg aacacaagga agagcacatg 2341 ctgcaggcga tacccttgtc aagaagctgc acaaattggc aaatcagaca atcgaactgt 2401 tatggaggtt tttcgaagtt cacatttcga aaattgtctt tgtcatcatt gcgattttta 2461 ttgccaacaa tatcaatgct ctatacattc cacttgttat tctcctctca ttggctatat 2521 gtctaccatc agctgcagat gggatattct ctttatttat gtgtgcctac ttattcctcg 2581 tggcactgag caagatgatc taccaactgg atattgttcc cgagttatca caaatcgacc 2641 gaggagttgg agcagataac tgttcacatg gaaatatttc aatgcctgaa tggtttggat 2701 tgaagaagga agttgaagga actgaaccaa tttatatgct ctttggagtc attgtttcga 2761 ttattgcatt ggcttttcaa tcaattgtta tatatcgaca aagacattat cgagcttcac 2821 tgggacttcc tgaatcgatg cgagctaaag tgttcccgga cttccatcat tctcattttg 2881 atagatctct caaaaatgcc atccaattct tgatagacta tggtttctat aagtttggac 2941 ttgaaatcac gatgatcgcc attggaattg acattttcaa tcgaatggat gcattggcag 3001 cgattcaatg tttctggctt gtcctgtttg cgctcaataa aagagtcttt gttcgaagaa 3061 tatgggtatt ctatgtgatc tatatggcga ttctgtatcc acttcagttc ttttcatatg 3121 ttggattacc acctgacagt tgtattgagt atccatggtc gtattggatt ccatcgtata 3181 gtgatgatgc gagattcaat ctgtcgtatc ttctgaactt gtcaatatac ggtgtaaact 3241 ggccatcagc atatctcatt ggcgatttct tcgtactcct cttggcatca tgccaattag 3301 cagttttccg gcgagaagga gaagataatg attcaattta caatgatgga aactttgtga 3361 ttaagccaga aaatccacaa tatgacttta ttgacaccaa aaagagttac gttgattatt 3421 tcaaatcatt cgttttccat tatggacact ggattacatt gatgtctaca ctagcagcag 3481 gaattgctgg aacgtcactt tttgctttgg gatacattat attcactctg acaatgctgt 3541 ggtctggtaa caatttgtat gtgatgaact caactctacg atcatttgaa catactttga 3601 aacgatggaa tgcacttttg ggatacacat tgttcacgat tacaatgaaa gtttgccttc 3661 aaatatttgg atgtgtattc ctgtcgtggt tcgatcaatc tggtggatgg ggaaagactc 3721 tgtgcatcgt tcgtcaactc ttcagtatca catgtgttaa taacgaatgt catgtgctca 3781 aagagctgga ggatttctcg aaggcgtgtg ctgttgagac gaaagaagga aatattggat 3841 ttgatgtgat tgcgctatcc ttcctcgtct tccaaatccg aattttccat tcttggtatt 3901 tccaacactg catggttgaa tatcgaagtg aggttattct ggccaataga ggtgccgtgc 3961 tgaagaatca actgattgaa aaggaaatga aggaacaaaa cgagcagcaa aaagccaagt 4021 tcaatgatat cagaagaaga actgaagcta ttcgtgaaag atatcaaaaa caaatcgaac 4081 gaggagctgc tgaacgtgac ttcgagccgg ttacttatgg gcacgccaaa cgagcgggag 4141 actactacat gttcaaatac gatcctgaaa atgatgatct tgtggaaccc gtcgacagtt 4201 ttgtaccaga agttgatccc aaggcaactg catatgatcg acttgatcct ggacagataa 4261 tgtacgctgc caccgctcac gacctcgacc tcgccaaaac tgtacagcaa gtcaagaaag 4321 gcgatactat caaagatcct gattcacgtg ctcttatcgc tgtttctgaa ccagaagctc 4381 gtaagccagg aggcactgaa gaaacggatg gtgatgaaga tgaggataat aaggattcga 4441 aagtggaaag tactgctaaa ttcattcaaa aaatgatcgc ttctgccttg gacttgtgta 4501 gtgtaacact aaacaaactg tgcagagaac accgatatgt tggatttgtt ttgagcaagg 4561 aaaaacaaaa gttgaagtca ggacactcgg aatctctttc aaatacatct agaaagctga 4621 cggatattcg atctgcagtt gatctaccaa gtcttcaact tgtgcaatcg gcgaatgatg 4681 ttgaaaagat ggagacagcc gtcagcgtgg attggcaaca aaaatcatca gcaacgagac 4741 tattgaatgc agttgtgaat tgtattggag cacacactga tattctctgc tacttcttcg 4801 caattatgac acaagtgatg actggtggac ttattactct tccacttcct ctgatgtcac 4861 tattctgggg aaatctatcg aatcctcgtc catccaagtt cttctgggtc acaatgatca 4921 cctacactga gtgtgtcatt gttatcaagt ttgtttgcca atttgcattc atgccttaca 4981 attctatcac gtggcgaaca gagcatcaaa tggacccgat gtcattggat aagttattcg 5041 gagtatcaca gagagatagt tttgcacttt gggacattgt tttgctcttc tcactcttct 5101 tccatcggta tatgctcaga aagttagggt tatggaagga tgccaatttg acggacacgt 5161 tcactttgaa ggaagagcct cgatcggcgt caggatcgga cacaggatca cccaagaaaa 5221 ttgctcaaga gccaaaggtt gttgtaactc agtcagatac ccttgaaggt acaagtggag 5281 gagagatagt cataccatct gatccaaatg cagtttccaa tatggaagaa ttagactgcg 5341 aacctccgat tccagagaag caaagtggac caattggaag attcattcat caattattcc 5401 atccaaaatt ccgttacatt cgtgatttgt atccaataat gtttggaatc gatgtgatat 5461 gcttcctcat catgacattt ggatactcgg catttggtga aggaggttct ggaaatgttt 5521 tagatgatgt gaaggcttct cgtattccgg taacacttgt tgttatgctc gttggaatga 5581 ctctggcaat tatcattgat cgagcactct acctcagaaa atcagttgtc ggaaagctaa 5641 tctatcaagt cttaatgatt gctttccttc acatttgggt attccttgtt cttccaaata 5701 tgactcgtcg ttctgcgata tcgaatcacg ttgctcaagc attgtacgtc atcaaatcgt 5761 gctatttcct tgtgtctgct tggcagatcc gaaatggtta tcctgaactt tgtattggaa 5821 atctattaac acattcatac ggaatgacca atatgattgc attcaaagta ttcatgaata 5881 ttccattcct cttcgagctt cgtacagcta ttgattggac atggacagat acttcaatgc 5941 ctcttttcga tttcttcaat atggaaaatt tctatgctca tatattcaat atcaagtgtg 6001 cccgccagtt cgaagctgcc tatccagctc caagagggat tcccaaagga aagttggtca 6061 agtatatgat gggattccca attatcattg gagtcgttat cttcatcttt tctcctctat 6121 tgctctggtc gctactcaat caaatcggaa ctatcagtat gccagaaaaa gttacgttga 6181 ggatttcgat tgaaggatat ccaccacttt acgagatgga ggcacaagga agtaatcacg 6241 ataacgctga acttggaatg ataaaacctg atcaattggc atctttgaat caagcattga 6301 cggatagtta cacgacacga gacactaatt ctattttaag atcaagaatg tctgtatcat 6361 atctgaaagg atacacatat gaggatattc tgattgtgcg attccgtcca gaatctgaaa 6421 tttattggcc gatttcacag gattcgagaa atgcgatgat cgataaattg agccgaaaca 6481 cgtcagtcaa ttttgaagta tctctggaat tcactcggcc atatgatcca aatgaaaacg 6541 ctgctttaaa acattcgaaa tcgtggcttg ttccaatctc cctggatatg acgattcgag 6601 caaaaattca aagtgctctc cgaggagatc caggtcatcc gattctcatt ccacagtcaa 6661 ttcctgcgtt tattcaagtt ccaaatcaag gagaattgac ccttccaaca tcaatcggaa 6721 atactattat caatgacgga aatccacgga ttaatacgac cgggatggaa aaatcagacg 6781 aagctcgggc ttggttcgac tcgttaacct tgaatctcga acaaggaaaa tcgcaaaacg 6841 agaaaatgtg gatcgccaca tccgaacatc caggagacca aaatgcgaaa ctctggataa 6901 agactgcaaa tacgacgtat tcgggaaggc cgtaccttca agttgtcgga tttattgata 6961 gagcattccc atcatttttg gcgaaagttt tcaaaggagg agtcattgca gtgtatcttt 7021 cagttatcct cgtcgttgga agaggtctgg ttcgtggaat cttcaccaca tctccaagca 7081 ctgtcatgtt cacagaatta ccgaatgcgg atcatcttct caaaatttgt ctcgacatct 7141 atttggttcg agaagcgaag gacttcatgt tggagcagga tctcttcgcc aaattaatat 7201 tcctgttccg atcaccagcg acactcatcg aatggacacg aatgagcaaa aagaagcaag 7261 aataaattta aatatttcac tgtcaaatat tctgcgaacc gaaccatcgt taatcatttt 7321 attttttact ttctctgttt ctcatcgaaa agaccaaaaa cctgaaaata ttcccaccat 7381 ttcctttttt ttctttccgt ctctggtact ttacgagttg tttccccttt ctctctcact 7441 gctcgcctga ttaggtcaca ctattttcaa tttttggaac cacatattat atgtctatgt 7501 attgttagat tccttctctc tctctccttc ttttcgggtt ttcttttcta tttccatttt 7561 gagttttttc ttttcgtttc ttgtttactt tttacgattc tgtaaatgac gaagaatatt 7621 ttaataaatt ttctattttt //