Dbfetch
LOCUS NM_001268457 5567 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Piezo-type mechanosensitive ion channel component 1 (pezo-1), partial mRNA. ACCESSION NM_001268457 VERSION NM_001268457.4 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 5567) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 5567) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5567) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 5567) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Apr 15, 2020 this sequence version replaced NM_001268457.3. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..5567 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene <1..5567 /gene="pezo-1" /locus_tag="CELE_C10C5.1" /db_xref="GeneID:182492" /db_xref="WormBase:WBGene00007505" CDS 1..5193 /gene="pezo-1" /locus_tag="CELE_C10C5.1" /standard_name="C10C5.1j" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="Piezo-type mechanosensitive ion channel component 1" /protein_id="NP_001255386.2" /db_xref="EnsemblGenomes-Gn:WBGene00007505" /db_xref="EnsemblGenomes-Tr:C10C5.1j" /db_xref="GeneID:182492" /db_xref="GOA:B9WRT3" /db_xref="InterPro:IPR027272" /db_xref="InterPro:IPR031334" /db_xref="InterPro:IPR031805" /db_xref="UniProtKB/TrEMBL:B9WRT3" /db_xref="WormBase:WBGene00007505" /translation="MLTKSIVSSSGDSGIYEDGCGIMPYIDDDDDLTPIIMARPAIGS GYTGGRNGWHRSPRQYLTNWWSDTLVKKLHKLANQTIELLWRFFEVHISKIVFVIIAI FIANNINALYIPLVILLSLAICLPSAADGIFSLFMCAYLFLVALSKMIYQLDIVPELS QIDRGVGADNCSHGNISMPEWFGLKKEVEGTEPIYMLFGVIVSIIALAFQSIVIYRQR HYRASLGLPESMRAKVFPDFHHSHFDRSLKNAIQFLIDYGFYKFGLEITMIAIGIDIF NRMDALAAIQCFWLVLFALNKRVFVRRIWVFYVIYMAILYPLQFFSYVGLPPDSCIEY PWSYWIPSYSDDARFNLSYLLNLSIYGVNWPSAYLIGDFFVLLLASCQLAVFRREGED NDSIYNDGNFVIKPENPQYDFIDTKKSYVDYFKSFVFHYGHWITLMSTLAAGIAGTSL FALGYIIFTLTMLWSGNNLYVMNSTLRSFEHTLKRWNALLGYTLFTITMKVCLQIFGC VFLSWFDQSGGWGKTLCIVRQLFSITCVNNECHVLKELEDFSKACAVETKEGNIGFDV IALSFLVFQIRIFHSWYFQHCMVEYRSEVILANRGAVLKNQLIEKEMKEQNEQQKAKF NDIRRRTEAIRERYQKQIERGAAERDFEPVTYGHECMRIDEDDPFPYYDLRISSQDTE NEAKRAGDYYMFKYDPENDDLVEPVDSFVPEVDPKATAYDRLDPGQIMYAATAHDLDL AKTVQQVKKGDTIKDPDSRALIAVSEPEARKPGGTEETDGDEDEDNKDSKVESTAKFI QKMIASALDLCSVTLNKLCREHRYVGFVLSKEKQKLKSGHSESLSNTSRKLTDIRSAV DLPSLQLVQSANDVEKMETAVSVDWQQKSSATRLLNAVVNCIGAHTDILCYFFAIMTQ VMTGGLITLPLPLMSLFWGNLSNPRPSKFFWVTMITYTECVIVIKFVCQFAFMPYNSI TWRTEHQMDPMSLDKLFGVSQRDSFALWDIVLLFSLFFHRYMLRKLGLWKDANLTDTF TLKEEPRSASGSDTGSPKKIAQEPKVVVTQSDTLEGTSGGEIVIPSDPNAVSNMEELD CEPPIPEKQSGPIGRFIHQLFHPKFRYIRDLYPIMFGIDVICFLIMTFGYSAFGEGGS GNVLDDVKASRIPVTLVVMLVGMTLAIIIDRALYLRKSVVGKLIYQVLMIAFLHIWVF LVLPNMTRRSAISNHVAQALYVIKSCYFLVSAWQIRNGYPELCIGNLLTHSYGMTNMI AFKVFMNIPFLFELRTAIDWTWTDTSMPLFDFFNMENFYAHIFNIKCARQFEAAYPAP RGIPKGKLVKYMMGFPIIIGVVIFIFSPLLLWSLLNQIGTISMPEKVTLRISIEGYPP LYEMEAQGSNHDNAELGMIKPDQLASLNQALTDSYTTRDTNSILRSRMSVSYLKGYTY EDILIVRFRPESEIYWPISQDSRNAMIDKLSRNTSVNFEVSLEFTRPYDPNENAALKH SKSWLVPISLDMTIRAKIQSALRGDPGHPILIPQSIPAFIQVPNQGELTLPTSIGNTI INDGNPRINTTGMEKSDEARAWFDSLTLNLEQGKSQNEKMWIATSEHPGDQNAKLWIK TANTTYSGRPYLQVVGFIDRAFPSFLAKVFKGGVIAVYLSVILVVGRGLVRGIFTTSP STVMFTELPNADHLLKICLDIYLVREAKDFMLEQDLFAKLIFLFRSPATLIEWTRMSK KKQE" ORIGIN 1 atgctaacaa agtcaatagt gagtagtagt ggtgactctg gtatttacga agacggttgt 61 ggtatcatgc cgtacattga cgacgacgat gatttgacgc caattataat ggcaagacct 121 gctattggca gtgggtacac gggtggcagg aacggatggc atagatcacc caggcagtat 181 ttgaccaact ggtggagcga tacccttgtc aagaagctgc acaaattggc aaatcagaca 241 atcgaactgt tatggaggtt tttcgaagtt cacatttcga aaattgtctt tgtcatcatt 301 gcgattttta ttgccaacaa tatcaatgct ctatacattc cacttgttat tctcctctca 361 ttggctatat gtctaccatc agctgcagat gggatattct ctttatttat gtgtgcctac 421 ttattcctcg tggcactgag caagatgatc taccaactgg atattgttcc cgagttatca 481 caaatcgacc gaggagttgg agcagataac tgttcacatg gaaatatttc aatgcctgaa 541 tggtttggat tgaagaagga agttgaagga actgaaccaa tttatatgct ctttggagtc 601 attgtttcga ttattgcatt ggcttttcaa tcaattgtta tatatcgaca aagacattat 661 cgagcttcac tgggacttcc tgaatcgatg cgagctaaag tgttcccgga cttccatcat 721 tctcattttg atagatctct caaaaatgcc atccaattct tgatagacta tggtttctat 781 aagtttggac ttgaaatcac gatgatcgcc attggaattg acattttcaa tcgaatggat 841 gcattggcag cgattcaatg tttctggctt gtcctgtttg cgctcaataa aagagtcttt 901 gttcgaagaa tatgggtatt ctatgtgatc tatatggcga ttctgtatcc acttcagttc 961 ttttcatatg ttggattacc acctgacagt tgtattgagt atccatggtc gtattggatt 1021 ccatcgtata gtgatgatgc gagattcaat ctgtcgtatc ttctgaactt gtcaatatac 1081 ggtgtaaact ggccatcagc atatctcatt ggcgatttct tcgtactcct cttggcatca 1141 tgccaattag cagttttccg gcgagaagga gaagataatg attcaattta caatgatgga 1201 aactttgtga ttaagccaga aaatccacaa tatgacttta ttgacaccaa aaagagttac 1261 gttgattatt tcaaatcatt cgttttccat tatggacact ggattacatt gatgtctaca 1321 ctagcagcag gaattgctgg aacgtcactt tttgctttgg gatacattat attcactctg 1381 acaatgctgt ggtctggtaa caatttgtat gtgatgaact caactctacg atcatttgaa 1441 catactttga aacgatggaa tgcacttttg ggatacacat tgttcacgat tacaatgaaa 1501 gtttgccttc aaatatttgg atgtgtattc ctgtcgtggt tcgatcaatc tggtggatgg 1561 ggaaagactc tgtgcatcgt tcgtcaactc ttcagtatca catgtgttaa taacgaatgt 1621 catgtgctca aagagctgga ggatttctcg aaggcgtgtg ctgttgagac gaaagaagga 1681 aatattggat ttgatgtgat tgcgctatcc ttcctcgtct tccaaatccg aattttccat 1741 tcttggtatt tccaacactg catggttgaa tatcgaagtg aggttattct ggccaataga 1801 ggtgccgtgc tgaagaatca actgattgaa aaggaaatga aggaacaaaa cgagcagcaa 1861 aaagccaagt tcaatgatat cagaagaaga actgaagcta ttcgtgaaag atatcaaaaa 1921 caaatcgaac gaggagctgc tgaacgtgac ttcgagccgg ttacttatgg gcacgaatgt 1981 atgcgtatcg acgaggatga cccatttcct tactatgact tgcgtatatc atcgcaagat 2041 actgaaaatg aggccaaacg agcgggagac tactacatgt tcaaatacga tcctgaaaat 2101 gatgatcttg tggaacccgt cgacagtttt gtaccagaag ttgatcccaa ggcaactgca 2161 tatgatcgac ttgatcctgg acagataatg tacgctgcca ccgctcacga cctcgacctc 2221 gccaaaactg tacagcaagt caagaaaggc gatactatca aagatcctga ttcacgtgct 2281 cttatcgctg tttctgaacc agaagctcgt aagccaggag gcactgaaga aacggatggt 2341 gatgaagatg aggataataa ggattcgaaa gtggaaagta ctgctaaatt cattcaaaaa 2401 atgatcgctt ctgccttgga cttgtgtagt gtaacactaa acaaactgtg cagagaacac 2461 cgatatgttg gatttgtttt gagcaaggaa aaacaaaagt tgaagtcagg acactcggaa 2521 tctctttcaa atacatctag aaagctgacg gatattcgat ctgcagttga tctaccaagt 2581 cttcaacttg tgcaatcggc gaatgatgtt gaaaagatgg agacagccgt cagcgtggat 2641 tggcaacaaa aatcatcagc aacgagacta ttgaatgcag ttgtgaattg tattggagca 2701 cacactgata ttctctgcta cttcttcgca attatgacac aagtgatgac tggtggactt 2761 attactcttc cacttcctct gatgtcacta ttctggggaa atctatcgaa tcctcgtcca 2821 tccaagttct tctgggtcac aatgatcacc tacactgagt gtgtcattgt tatcaagttt 2881 gtttgccaat ttgcattcat gccttacaat tctatcacgt ggcgaacaga gcatcaaatg 2941 gacccgatgt cattggataa gttattcgga gtatcacaga gagatagttt tgcactttgg 3001 gacattgttt tgctcttctc actcttcttc catcggtata tgctcagaaa gttagggtta 3061 tggaaggatg ccaatttgac ggacacgttc actttgaagg aagagcctcg atcggcgtca 3121 ggatcggaca caggatcacc caagaaaatt gctcaagagc caaaggttgt tgtaactcag 3181 tcagataccc ttgaaggtac aagtggagga gagatagtca taccatctga tccaaatgca 3241 gtttccaata tggaagaatt agactgcgaa cctccgattc cagagaagca aagtggacca 3301 attggaagat tcattcatca attattccat ccaaaattcc gttacattcg tgatttgtat 3361 ccaataatgt ttggaatcga tgtgatatgc ttcctcatca tgacatttgg atactcggca 3421 tttggtgaag gaggttctgg aaatgtttta gatgatgtga aggcttctcg tattccggta 3481 acacttgttg ttatgctcgt tggaatgact ctggcaatta tcattgatcg agcactctac 3541 ctcagaaaat cagttgtcgg aaagctaatc tatcaagtct taatgattgc tttccttcac 3601 atttgggtat tccttgttct tccaaatatg actcgtcgtt ctgcgatatc gaatcacgtt 3661 gctcaagcat tgtacgtcat caaatcgtgc tatttccttg tgtctgcttg gcagatccga 3721 aatggttatc ctgaactttg tattggaaat ctattaacac attcatacgg aatgaccaat 3781 atgattgcat tcaaagtatt catgaatatt ccattcctct tcgagcttcg tacagctatt 3841 gattggacat ggacagatac ttcaatgcct cttttcgatt tcttcaatat ggaaaatttc 3901 tatgctcata tattcaatat caagtgtgcc cgccagttcg aagctgccta tccagctcca 3961 agagggattc ccaaaggaaa gttggtcaag tatatgatgg gattcccaat tatcattgga 4021 gtcgttatct tcatcttttc tcctctattg ctctggtcgc tactcaatca aatcggaact 4081 atcagtatgc cagaaaaagt tacgttgagg atttcgattg aaggatatcc accactttac 4141 gagatggagg cacaaggaag taatcacgat aacgctgaac ttggaatgat aaaacctgat 4201 caattggcat ctttgaatca agcattgacg gatagttaca cgacacgaga cactaattct 4261 attttaagat caagaatgtc tgtatcatat ctgaaaggat acacatatga ggatattctg 4321 attgtgcgat tccgtccaga atctgaaatt tattggccga tttcacagga ttcgagaaat 4381 gcgatgatcg ataaattgag ccgaaacacg tcagtcaatt ttgaagtatc tctggaattc 4441 actcggccat atgatccaaa tgaaaacgct gctttaaaac attcgaaatc gtggcttgtt 4501 ccaatctccc tggatatgac gattcgagca aaaattcaaa gtgctctccg aggagatcca 4561 ggtcatccga ttctcattcc acagtcaatt cctgcgttta ttcaagttcc aaatcaagga 4621 gaattgaccc ttccaacatc aatcggaaat actattatca atgacggaaa tccacggatt 4681 aatacgaccg ggatggaaaa atcagacgaa gctcgggctt ggttcgactc gttaaccttg 4741 aatctcgaac aaggaaaatc gcaaaacgag aaaatgtgga tcgccacatc cgaacatcca 4801 ggagaccaaa atgcgaaact ctggataaag actgcaaata cgacgtattc gggaaggccg 4861 taccttcaag ttgtcggatt tattgataga gcattcccat catttttggc gaaagttttc 4921 aaaggaggag tcattgcagt gtatctttca gttatcctcg tcgttggaag aggtctggtt 4981 cgtggaatct tcaccacatc tccaagcact gtcatgttca cagaattacc gaatgcggat 5041 catcttctca aaatttgtct cgacatctat ttggttcgag aagcgaagga cttcatgttg 5101 gagcaggatc tcttcgccaa attaatattc ctgttccgat caccagcgac actcatcgaa 5161 tggacacgaa tgagcaaaaa gaagcaagaa taaatttaaa tatttcactg tcaaatattc 5221 tgcgaaccga accatcgtta atcattttat tttttacttt ctctgtttct catcgaaaag 5281 accaaaaacc tgaaaatatt cccaccattt cctttttttt ctttccgtct ctggtacttt 5341 acgagttgtt tcccctttct ctctcactgc tcgcctgatt aggtcacact attttcaatt 5401 tttggaacca catattatat gtctatgtat tgttagattc cttctctctc tctccttctt 5461 ttcgggtttt cttttctatt tccattttga gttttttctt ttcgtttctt gtttactttt 5521 tacgattctg taaatgacga agaatatttt aataaatttt ctatttt //