Dbfetch
LOCUS NM_001267250 1770 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Sphingosine kinase 1 (sphk-1), mRNA. ACCESSION NM_001267250 VERSION NM_001267250.2 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1770) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 1770) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1770) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 1770) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Sep 4, 2019 this sequence version replaced NM_001267250.1. FEATURES Location/Qualifiers source 1..1770 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="II" gene 1..1770 /gene="sphk-1" /locus_tag="CELE_C34C6.5" /db_xref="GeneID:183197" /db_xref="WormBase:WBGene00007918" CDS 278..1462 /gene="sphk-1" /locus_tag="CELE_C34C6.5" /standard_name="C34C6.5c" /note="Confirmed by transcript evidence" /codon_start=1 /product="Sphingosine kinase 1" /protein_id="NP_001254179.1" /db_xref="EnsemblGenomes-Gn:WBGene00007918" /db_xref="GeneID:183197" /db_xref="WormBase:WBGene00007918" /translation="MEEQCRGNLLVFINPNSGTGKSLETFANTVGPKLDKSLIRYEVV VTTGPNHARNVLMTKADLGKFNGVLILSGDGLVFEALNGILCREDAFRIFPTLPIGIV PSGSGNGLLCSVLSKYGTKMNEKSVMERALEIATSPTAKAESVALYSVKTDNQSYASF LSIGWGLMADIDIDSEKWRKSLGHHRFTVMGFIRSCNLRSYKGRLTYRPYKPKGFHPS SNVFSVYEKTTQQRIDDSKVKTNGSVSDSEEETMETKFQNWTLPDSDETLAVGSSDLE ETVVIEDNFVNIYAVTLSHIAADGPFAPSAKLEDNRIHLSYILWKDIGTRVNIAKYLL AIEHETHLDLPFVKHVEVSSMKLEVISEGSHVVLDGEVVDTKTIEVASTKNHISVFSS TA" ORIGIN 1 actgtcgtaa aatgtgatgc tttaccgtag ctaaaaatcc tttaatttat tttttcttta 61 attttcaaat caaatttcaa ttcaaatcaa aagttgtttt gaaaaataat tgtataaatg 121 ttcaactcgt ttcatccgct tgttaatgct ggtcattgat ccctcgatta aaccgcctgt 181 tgttacataa aaatcgatat gccaaagacc acgcagccaa ttttcgagaa tcgtttgttt 241 ataatatctc acaagaaccc acttaaactt tggaataatg gaagaacaat gtcgtggaaa 301 tcttcttgtt ttcatcaatc ctaacagtgg aactggaaaa agtctggaga cttttgcgaa 361 tacagttgga ccgaagttgg ataaaagctt gattcgatat gaagtcgttg ttacgaccgg 421 gccgaatcac gcgagaaatg tgctcatgac aaaagccgac cttggaaagt tcaatggggt 481 tttgattctt tctggagatg gtttggtttt cgaggctctc aacggaattc tttgtcgtga 541 agatgcattc cggatattcc caactctccc aatcggaatt gttcccagcg gatccggaaa 601 cggactttta tgttcggttt tgtcgaaata cggaacaaaa atgaacgaga aatctgtaat 661 ggaaagagct ttggaaattg ccacctcacc aacagcaaag gcggaaagcg tagctttgta 721 ttcagttaaa acagataatc agtcatatgc atcgtttttg tcaattggat ggggtttgat 781 ggcagatatt gacattgaca gtgagaaatg gagaaaatcg cttggccatc acagattcac 841 tgttatggga ttcattcgca gctgcaatct ccgatcttat aaaggacgcc ttacgtatcg 901 tccatacaaa ccaaaaggat tccatccatc gtccaacgtt ttcagtgtgt atgaaaaaac 961 tacacaacaa aggattgatg attcaaaagt aaaaacgaat ggatccgtgt cagattccga 1021 agaagaaaca atggagacaa aattccaaaa ttggacgctg cccgattcag atgaaacttt 1081 ggcagttgga agttctgatt tagaagaaac tgtcgtaatc gaggataatt ttgtgaatat 1141 ctatgcagtt actctttccc atatcgcagc tgatggacca ttcgctccaa gtgccaaatt 1201 agaagataat cgaattcatc tttcgtatat tctatggaaa gatatcggta cacgagttaa 1261 tattgctaaa tatcttttgg cgattgaaca cgagactcat ctggatctac cctttgttaa 1321 acacgtggaa gtgtcgtcaa tgaaactgga agttatcagt gaaggatcac acgtagtact 1381 cgatggagaa gtagtcgaca cgaaaacaat tgaagtagca tcgacaaaaa atcatatttc 1441 cgttttctca tcaactgcct agaaattaaa tatcttttat ctttgatttc taaccggttt 1501 tccttgtgta caaacaccga tgtatagatt ttattttatt ttcccaaaga agtaacctaa 1561 taactatgtt ttaggattta aagtatattg aaatagcttt tcctcacatt ttttgaagtt 1621 tttaatctat tcaagggtcc cctctctcac ttttcctcta cttcgtttcg tgtgctttcc 1681 tcatttttta cttgcctttt ctgtgattta tttactttaa aaattttcta aacgtttaaa 1741 aattattttc ctattctcta ctgaattgtt //