Dbfetch
LOCUS NM_001136390 1591 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Synaptojanin (unc-26), partial mRNA. ACCESSION NM_001136390 VERSION NM_001136390.4 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1591) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 1591) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1591) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 1591) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Apr 15, 2020 this sequence version replaced NM_001136390.3. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..1591 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene <1..1591 /gene="unc-26" /locus_tag="CELE_JC8.10" /db_xref="GeneID:178284" /db_xref="WormBase:WBGene00006763" CDS 1..1527 /gene="unc-26" /locus_tag="CELE_JC8.10" /standard_name="JC8.10d" /note="Confirmed by transcript evidence" /codon_start=1 /product="Synaptojanin" /protein_id="NP_001129862.1" /db_xref="EnsemblGenomes-Gn:WBGene00006763" /db_xref="EnsemblGenomes-Tr:JC8.10d" /db_xref="GeneID:178284" /db_xref="GOA:G5ECL2" /db_xref="InterPro:IPR000300" /db_xref="InterPro:IPR002013" /db_xref="InterPro:IPR005135" /db_xref="InterPro:IPR012677" /db_xref="InterPro:IPR015047" /db_xref="InterPro:IPR036691" /db_xref="UniProtKB/Swiss-Prot:G5ECL2" /db_xref="WormBase:WBGene00006763" /translation="MSVRGIRIWRRNDARFQPSILVEKNGLDGSLLFQGGAIATLDSD STDVERRSYQKIVDAYGILGVLAITKDEAVLVAVTGVLSVGQLYGADILKITNVEFIS LRTFGSVENVDSRIIDLQRLLSSQMFYFSSLQSYDLTRSAQHRDSHDCSDARFFWNRS LHFSFQRYGIDTDNWLLKCMAGSVLVRVVYVGANTGRVALISRLSCERVGTRFNVRGA NYLGNVANFVETEQLLLFDEKECSLLQIRGSIPLFWEQPGVNVGSHKVKLRAFETSLP AYHRHLSQLQHRYGEFAIVNLLGRKEGERVLGDAFKTQHKSSHFAPLVDFIDFDYHAQ MKISKEAIVQLKKKMSPHMTKHGFFYSMGKEIVKRQTGVIRTNCLDCLDRTNAVQTAI GLQMSHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIYAGTGALDGKSKLKD ASRSLARTIQNNLMDGAKQESFDLFLTGAAYDPRLFDRACNILPPSLIQESYYYHGKL " ORIGIN 1 atgtcagttc gagggattcg gatatggcgg aggaatgatg cacgatttca accatcaatc 61 cttgtcgaaa agaatggatt agatggatct cttttgtttc agggtggagc tattgcaacg 121 ttagattcgg attcaacaga cgttgaacga agatcatatc aaaagatagt tgatgcttat 181 ggaatacttg gagtacttgc tattacaaaa gatgaagctg ttctagttgc tgttactggt 241 gtactttcag ttggacaact ttatggagct gatattctta aaattacaaa tgtcgaattt 301 atatcgttac gaacgtttgg ttccgtcgaa aatgttgatt ccagaattat cgatttacaa 361 cgactacttt catctcaaat gttctatttt tcatcacttc aatcatatga tctcactcgt 421 tcagctcaac atcgtgattc acatgattgt agtgatgcac gattcttctg gaatcgaagt 481 cttcattttt catttcaaag atatggaatt gatacggata attggttgtt gaaatgcatg 541 gctggatcag ttctcgttcg tgttgtgtat gtcggtgcaa acacaggacg tgttgctcta 601 atatctcgtc taagttgtga gcgtgtcggc actcgattca acgtacgagg agccaattat 661 ctcggaaatg tggctaattt cgtcgagact gagcaattgt tgcttttcga cgaaaaagaa 721 tgctcgctgc tccaaattcg ggggtctatt ccattatttt gggagcagcc tggagttaat 781 gtcggatcac ataaagtgaa attgagggct ttcgagacga gtcttcctgc ctatcacaga 841 cacttatccc aactccaaca ccgttatgga gaatttgcaa tcgtcaatct attgggtcga 901 aaagaaggtg aacgagtgct cggtgatgcg ttcaaaactc aacacaaatc ttcacatttc 961 gctccactag tcgactttat cgattttgat tatcatgctc aaatgaagat ttccaaagag 1021 gcaattgtgc agttgaaaaa gaaaatgagc ccacatatga caaagcatgg atttttctat 1081 tcaatgggaa aagaaatagt gaaacgacaa actggagtaa ttcgaacaaa ttgtctagat 1141 tgtctggata ggacgaatgc cgtacaaaca gccatcggac ttcaaatgtc acatgatcaa 1201 gttgcatttc tgaatttaaa cgcgggaaaa gtgaatgtag agcaacgagt tgaagagatt 1261 cttcgtgatt tgtggcagaa aaatggagat cagtgtagta cgatctacgc gggaactgga 1321 gctcttgacg gaaagagcaa gttgaaagac gcgtcgagat cgcttgcaag aactattcag 1381 aataatttga tggatggtgc aaagcaggaa tcatttgatt tatttttgac tggagccgca 1441 tatgatccga ggcttttcga tagagcatgt aatatattgc cacctagttt gatacaagaa 1501 agctattact atcatggtaa gctataaatg tcgtgaaatt tgtattattt aatagttttt 1561 ttgtttcatg catgaatgaa agtgttgaga t //