Dbfetch
LOCUS NM_001029525 1718 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Zinc finger protein lsy-2 (lsy-2), mRNA.
ACCESSION NM_001029525
VERSION NM_001029525.5
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1718)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1718)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1718)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1718)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003284).
On Feb 2, 2021 this sequence version replaced NM_001029525.4.
FEATURES Location/Qualifiers
source 1..1718
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="X"
gene 1..1718
/gene="lsy-2"
/locus_tag="CELE_F49H12.1"
/db_xref="GeneID:180522"
/db_xref="WormBase:WBGene00003087"
CDS 97..1194
/gene="lsy-2"
/locus_tag="CELE_F49H12.1"
/standard_name="F49H12.1a"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Zinc finger protein lsy-2"
/protein_id="NP_001024696.1"
/db_xref="EnsemblGenomes-Gn:WBGene00003087"
/db_xref="GeneID:180522"
/db_xref="GOA:Q9N5S3"
/db_xref="InterPro:IPR013087"
/db_xref="InterPro:IPR036236"
/db_xref="UniProtKB/TrEMBL:Q9N5S3"
/db_xref="WormBase:WBGene00003087"
/translation="MLTRRNAKQSQRNSADQSLSEFNSSSMTHGSNQSVYHHNQHMDD
SEMMMDEQDYSQYQMGFPEEDEMVEGMMTPRAVHQCNVCNKIFVSYKGLQQHAVIHTD
QKPFRCDICSKSFRFKSNLFEHRSVHTGFTPHACPYCGKTCRLKGNLKKHLRTHVTTK
EELEAAWRPFASNRRPPADIPDDAIVLRGAGGPYYTPPPRPKKKKLGLGEPEHWVDKL
RRGDLLPQVELEDKIRRLEDTIFNNMSLERWGNLFEIAKSIAFETHDCPVCKSQFMTR
MDCVSHHTLEHENHREGLEFFCEKCYRPFADEASYNQHMSYHTRVSSLIETGEIVPQP
ADPEILVPTNDEFQMLFGANFGQQMMEPQLI"
ORIGIN
1 cacttggcgg caaggtgaat agtttgaatt cgacgcttct ttcgcaatat ctagcagtct
61 cgagctgttt ttaagctgtc tgaggcaaat tttgtcatgc taaccagaag aaatgctaag
121 cagagtcaac ggaattctgc ggatcagtcc ctctctgaat tcaacagttc cagtatgact
181 cacgggtcga atcagtcagt ttatcaccac aatcaacaca tggatgactc cgaaatgatg
241 atggatgagc aggattattc tcagtatcaa atggggtttc ctgaagaaga tgagatggtg
301 gaaggaatga tgacccctcg agctgtgcac cagtgtaatg tttgcaacaa aatatttgtt
361 tcctataaag gtctccagca gcatgcagtg atacacacag atcagaagcc tttccgatgt
421 gatatttgtt caaaatcatt taggtttaag tcgaacttgt ttgagcatcg ttcagtccat
481 accggcttca ctcctcacgc ctgtccatat tgtggaaaaa cttgtcgact gaaaggcaac
541 ctcaagaagc atcttcgcac acacgtcacg acgaaggaag agctggaagc tgcctggagg
601 ccgtttgcca gcaaccgtcg gccgcctgct gacatccctg acgacgccat cgtacttcgt
661 ggagccggag gaccgtacta cacgccgccg cctcgtccga agaagaagaa gcttggactc
721 ggagaaccag agcactgggt ggacaagttg agaagaggag atcttctgcc acaagttgag
781 cttgaggaca agatcagacg tctcgaagac actatcttca acaacatgtc tcttgagcgt
841 tggggcaacc ttttcgagat tgcaaagtcc attgcattcg agacccatga ttgtccagtg
901 tgcaagtctc aattcatgac cagaatggat tgtgtcagcc atcacacact cgaacacgaa
961 aatcatcggg agggtcttga atttttctgc gaaaaatgct atagaccatt tgctgacgag
1021 gccagctaca atcagcacat gagctaccac acgcgagtta gcagtttgat tgaaactgga
1081 gaaattgttc ctcagccagc agatccggaa attttggtac caacgaatga cgagtttcaa
1141 atgctgtttg gcgcaaactt tggccagcag atgatggaac cacagttgat ttgaaattga
1201 ttattattat tgttgcttag atagagtaat tcagcttgcg cacttaccca tttttgacgc
1261 cttcgatgac atttctttca acttctctta ttcacctttt tcaaaacggg gtactttttt
1321 cttcttgttt ttttggttct tttcttacct cggggattag tattttttga agatttccta
1381 cccattgaca gacagacttg ctctttcaat catttttttt tccaaaattg taagcatgcc
1441 gtttatcatt gttggcattg atctacacca gcgatatctt gctccttatt tccatttgta
1501 atccgttgtt ttttattatt ataacctaat gtataaccta ttgaggagtt tgtatagtcg
1561 ttgtagtagt ctttgtttgt tttacctttt tttcccgttg cctgatttcg tctattttta
1621 tatattcttc tcttttgagc cgattgtata ggtgttcgat taatatgaag tgtcataatt
1681 caatttatgg agtgaataat aaaattttga tacgtttg
//