Dbfetch
LOCUS NM_001029433 3020 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Smad protein daf-3 (daf-3), mRNA. ACCESSION NM_001029433 VERSION NM_001029433.7 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 3020) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 3020) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3020) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 3020) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). On May 27, 2020 this sequence version replaced NM_001029433.6. FEATURES Location/Qualifiers source 1..3020 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="X" gene 1..3020 /gene="daf-3" /locus_tag="CELE_F25E2.5" /db_xref="GeneID:180431" /db_xref="WormBase:WBGene00000899" CDS 48..2642 /gene="daf-3" /locus_tag="CELE_F25E2.5" /standard_name="F25E2.5b" /note="Confirmed by transcript evidence" /codon_start=1 /product="Smad protein daf-3" /protein_id="NP_001024604.1" /db_xref="EnsemblGenomes-Gn:WBGene00000899" /db_xref="EnsemblGenomes-Tr:F25E2.5b" /db_xref="GeneID:180431" /db_xref="GOA:Q95QI8" /db_xref="InterPro:IPR001132" /db_xref="InterPro:IPR003619" /db_xref="InterPro:IPR008984" /db_xref="InterPro:IPR013019" /db_xref="InterPro:IPR013790" /db_xref="InterPro:IPR017855" /db_xref="InterPro:IPR036578" /db_xref="UniProtKB/TrEMBL:Q95QI8" /db_xref="WormBase:WBGene00000899" /translation="MGDHHNLTGLPGTSIPPQFNYSQPGTSTGGPLYGGKPSHGLEDI PDVEEYERNLLGAGAGFNLLNVGNMANVPDEHTPMMSPVNTTTKILQRSGIKMEIPPY LDPDSQDDDPEDGVNYPDPDLFDTKNTNMTEYDLDVLKLGKPAVDEARKKIEVPDASA PPNKIVEYLMYYRTLKESELIQLNAYRTKRNRLSLNLVKNNIDREFDQKACESLVKKL KDKKNDLQNLIDVVLSKGTKYTGCITIPRTLDGRLQVHGRKGFPHVVYGKLWRFNEMT KNETRHVDHCKHAFEMKSDMVGEALQVCVNPYHYEIVIGTMIVGQRDHDNRDMPPPHQ RYHTPGRQDPVDDMSRFIPPASIRPPPMNMHTRPQPMPQQLPSVGATFAHPLPHQAPH NPGVSHPYSIAPQTHYPLNMNPIPQMPQMPQMPPPLHQGYGMNGPSCSSENNNPFHQN HHYNDISHPNHYSYDCGPNLYGFPTPYPDFHHPFNQQPHQPPQLSQNHTSQQGSHQPG HQGQVPNDPPISRPVLQPSTVTLDVFRRYCRQTFGNRFFEGESEQSGAIIRSSNKFIE EFDSPICGVTVVRPRMTDGEVLENIMPEDAPYHDICKFILRLTSESVTFSGEGPEVSD LNEKWGTIVYYEKNLQIGEKKCSRGNFHVDGGFICSENRYSLGLEPNPIREPVAFKVR KAIVDGIRFSYKKDGSVWLQNRMKYPVFVTSGYLDEQSGGLKKDKVHKVYGCASIKTF GFNVSKQIIRDALLSKQMATMYLQGKLTPMNYIYEKKTQEELRREATRTTDSLAKYCC VRVSFCKGFGEAYPERPSIHDCPVWIELKINIAYDFMDSICQYITNCFEPLGMEDFAK LGINVSDD" ORIGIN 1 gtaatcaaat tgtaaaggaa aaatattaat agtcagagta cacataaatg ggtgatcatc 61 ataatttaac gggccttccc ggtacctcca tcccgccaca gttcaactat tctcagcccg 121 gtaccagcac cggagggccg ctttatggtg gaaaaccttc tcatggattg gaagatattc 181 ctgatgtaga ggaatatgag aggaacctgc tcggggctgg agcaggtttt aatctgctca 241 atgtaggaaa tatggctaat gttcccgacg agcacacacc gatgatgtca ccagtgaata 301 caactacaaa gattctacaa cggagtggta ttaaaatgga aatcccgcca tatttggatc 361 cagacagtca ggatgatgac ccggaagatg gtgtcaacta cccggatcca gatttatttg 421 acacaaaaaa cacaaatatg accgagtacg atttggatgt gttgaagctt ggaaaaccag 481 cagtagatga agcacggaaa aagatcgaag ttcccgacgc tagtgcgccg ccaaacaaaa 541 ttgtagaata tttgatgtat tatagaacgt taaaagaaag tgaactcata caactgaatg 601 cgtatcggac aaaacgaaat cgattatcgt tgaacttggt caaaaacaat attgatcgag 661 agttcgacca aaaagcttgc gagtccctgg tgaaaaaatt gaaggataag aagaatgatc 721 tccagaacct gattgatgtg gttctttcaa aaggtacaaa atataccggt tgcattacaa 781 ttccaaggac acttgatggc cggttacagg tccacggaag aaaaggtttc cctcacgtag 841 tctatggcaa actgtggagg tttaatgaaa tgacaaaaaa cgaaacgcgt catgtggacc 901 actgcaagca cgcatttgaa atgaaaagtg acatggtagg tgaagcctta caggtatgcg 961 tgaatcccta tcactacgaa attgtcattg gaactatgat tgttgggcag agggatcatg 1021 acaatcgaga tatgccgccg ccacatcaac gctaccacac tccaggtcgg caggatccag 1081 ttgacgatat gagtagattt ataccaccag cttccattcg tccgcctccg atgaacatgc 1141 acacaaggcc tcagcctatg cctcaacaat tgccttcagt tggcgcaacg tttgcccatc 1201 ctctcccaca tcaggcgcca cataacccag gggtttcaca tccgtactcc attgctccac 1261 agacccatta cccgttgaac atgaacccaa ttccgcaaat gccgcaaatg ccacaaatgc 1321 caccacctct ccatcaggga tatggaatga atgggccgag ttgctcttca gaaaacaaca 1381 atccattcca ccaaaatcac cattataatg atattagcca tccaaatcac tattcctacg 1441 actgtggtcc gaacttgtac gggtttccaa ctccttatcc ggattttcac catcctttca 1501 atcagcaacc acaccagccg ccacaactat cacaaaacca tacgtcccaa caaggcagtc 1561 atcaaccagg gcaccaaggt caggtaccga atgatccacc aatttcaaga ccagtgttac 1621 aaccatcaac agtcaccttg gacgtgttcc gtcggtactg tagacagaca tttggaaatc 1681 gattttttga aggagaaagt gaacaatccg gcgcaataat tcggtctagt aacaaattca 1741 ttgaagaatt tgattcgccg atttgtggtg tgacagttgt tcgaccgcgg atgacagacg 1801 gtgaggtttt ggagaacatc atgccggaag atgcaccata tcatgacatt tgcaagttca 1861 ttttgaggct cacatcagaa agtgtaactt tctcaggaga ggggccagaa gttagtgatt 1921 tgaacgaaaa atggggaaca attgtgtact atgagaaaaa tttgcaaatt ggcgagaaaa 1981 aatgttcgag aggaaatttc cacgtggatg gcggattcat ttgctctgag aatcgttaca 2041 gtctcggact tgagccaaat ccaattagag aaccagtggc gtttaaagtt cgtaaagcaa 2101 tagtggatgg aattcgcttt tcctacaaaa aagacgggag tgtttggctt caaaaccgca 2161 tgaagtaccc ggtatttgtc acttctgggt atctcgacga gcaatcagga ggcctaaaga 2221 aggataaagt gcacaaagtt tacggatgtg cgtctatcaa aacgtttggc ttcaacgttt 2281 ccaaacaaat catcagagac gcgcttcttt ccaagcaaat ggcaacaatg tacttgcaag 2341 gaaaattgac tccgatgaat tatatctacg agaagaagac tcaggaagag ctgcgaaggg 2401 aagcaacacg caccactgat tcattggcca agtactgttg tgtccgtgtc tcgttctgca 2461 aaggatttgg agaagcatac ccagaacgcc cgtcaattca tgattgtcca gtttggattg 2521 agttgaaaat caacattgcc tacgatttca tggattcaat ctgccagtac ataaccaact 2581 gcttcgagcc gctaggaatg gaagattttg caaaattggg aatcaacgtc agtgatgact 2641 aaatgataac ttttttcact caccctacta gatactgatt tagtcttatt ccaaatcatc 2701 caacgatatc aaactttttc ctttgaactt tgcatactat gttatcacaa gttccaagca 2761 gtttcaatac aaacatagga tatgttaaca acttttgata agaatcaagt taccaactgt 2821 tcattgtgag ctttgagctg tatagaagga caatgtatcc catacctcaa tctttaatag 2881 tcatcagtca ctggtcccgc accaattttt tcgattcgca tatgtcatat attgcaccgt 2941 ggcccttttt attgtaactt ttaatatatt ttcttcccaa cttgtgaata tgattgatga 3001 accaccattt tgagtaataa //