Dbfetch
LOCUS NM_001029045 2189 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Polypeptide N-acetylgalactosaminyltransferase 4 (gly-4), mRNA. ACCESSION NM_001029045 VERSION NM_001029045.6 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2189) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2189) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2189) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2189) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003283). On Feb 2, 2021 this sequence version replaced NM_001029045.5. FEATURES Location/Qualifiers source 1..2189 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="V" gene 1..2189 /gene="gly-4" /locus_tag="CELE_Y116F11B.12" /db_xref="GeneID:180302" /db_xref="WormBase:WBGene00001629" CDS 138..1907 /gene="gly-4" /locus_tag="CELE_Y116F11B.12" /standard_name="Y116F11B.12a" /note="Confirmed by transcript evidence" /codon_start=1 /product="Polypeptide N-acetylgalactosaminyltransferase 4" /protein_id="NP_001024216.1" /db_xref="EnsemblGenomes-Gn:WBGene00001629" /db_xref="EnsemblGenomes-Tr:Y116F11B.12a.1" /db_xref="EnsemblGenomes-Tr:Y116F11B.12a.2" /db_xref="GeneID:180302" /db_xref="WormBase:WBGene00001629" /translation="MLPRMLKMKTVGTVLAVIWLFGLAFIYVQSTSSSLRPPGRHPPP LPQLDPLIPQNPPQNDEIRPKKSAPPIPTINLAEDTTIHERTEKDVTWKTFDVEKFLN KGKWHQGEDKYKANSFNQEASDALNPTRKIPDSREPQCRDVDYSKVGMQPTTVIITYH NEARSSLLRTVFSVFNQSPEELLLEIVLVDDNSQDVEIGKELAQIQRITVLRNNQREG LIRSRVKGAQVARAPVLTFLDSHIECNQKWLEPLLARIAENPKAVVAPIIDVINVDNF NYVGASADLRGGFDWTLVFRWEFMNEQLRKERHAHPTAPIRSPTMAGGLFAISKEWFN ELGTYDLDMEVWGGENLEMSFRVWQCGGSLEIMPCSRVGHVFRKKHPYTFPGGSGNVF QKNTRRAAEVWMDEYKAIYLKNVPSARFVNFGDITDRLAIRDRLQCKSFKWYLENVYP QLEIPRKTPGKSFQMKIGNLCLDSMARKESEAPGLFGCHGTGGNQEWVFDQLTKTFKN AISQLCLDFSSNTENKTVTMVKCENLRPDTMVVEKNGWLTQGGKCLTVNQGSGGDWLI YGAHCELNNGAQRWIFEKLDTYE" ORIGIN 1 tactcactca tgtccaccgc cgggacgaga aactgagctt cttgtgcggg aaattttcaa 61 cttttcacac atttcttttt ggtttaatta ttggataaag acacagaaga aagcattcat 121 taaaaaaaat tgccaaaatg ctgccgagaa tgctgaaaat gaagacggtg ggcaccgttt 181 tggcagtcat ttggctgttt ggattggcat tcatttatgt gcaatctacg agctcaagct 241 taaggccacc gggacgtcat ccaccaccac taccacagct cgacccttta ataccccaaa 301 acccgccgca aaacgacgaa attcggccga aaaagagcgc gccgcccatt ccaacgataa 361 atttggcaga agataccaca attcatgaga gaaccgaaaa agatgtcact tggaagacat 421 tcgatgtgga aaagtttttg aataagggga aatggcatca gggagaggac aaatacaagg 481 ccaactcatt caaccaagaa gcctccgacg cgctaaaccc cacccgaaaa attccggatt 541 cccgtgagcc ccaatgccgt gacgtggatt attcgaaagt tggcatgcag ccaactacag 601 taatcattac ttaccataat gaagcccgga gctcactttt acggacggtc tttagtgttt 661 tcaatcagtc accggaggaa ttgctgctgg aaattgtgct agtcgacgat aattcccagg 721 atgtcgaaat tggaaaagag ttggctcaaa ttcaacgaat tacagtactc cgtaataatc 781 aacgggaggg tctgattcgg agccgggtta aaggagccca agtggctcgg gctccggtgc 841 tcacattcct cgatagtcat attgagtgta atcagaaatg gcttgaaccc ctgttggcta 901 gaattgccga gaatccgaaa gccgtcgttg caccgattat cgatgttatc aatgttgata 961 attttaatta tgttggagcg agtgccgatt tgaggggagg attcgactgg accctagtct 1021 tccgctggga attcatgaac gaacagctcc gcaaggaacg ccacgcccat ccgacggcgc 1081 ctattcggtc gcctacaatg gccggaggcc tattcgcaat ctcaaaagaa tggttcaacg 1141 aactgggaac ctatgacctc gatatggaag tatggggtgg cgaaaatctg gaaatgtcat 1201 tcagagtctg gcagtgcggc ggctcactgg aaattatgcc atgctcccgg gttgggcatg 1261 ttttccggaa gaaacatcct tatacattcc ccgggggatc cggaaacgtg ttccagaaaa 1321 atacgagaag agccgctgaa gtatggatgg acgagtataa ggcgatttat ttgaaaaatg 1381 taccttcggc cagatttgtc aattttggag acataaccga ccgcctggcc attcgagacc 1441 gcctacagtg taaatcgttc aaatggtacc tggaaaatgt gtacccacag ttggaaatcc 1501 cgcgaaaaac gcctggaaaa tcgttccaaa tgaaaatcgg caacctctgc ttggattcga 1561 tggctcgaaa agaatcagaa gctccggggc tcttcggttg tcatggtacc ggtggaaatc 1621 aggaatgggt ctttgatcag ctcaccaaga catttaaaaa tgcgatttct cagttgtgcc 1681 tcgatttttc gtcaaacacc gagaataaga cggtgacaat ggtcaaatgt gaaaatctga 1741 gacccgacac aatggtcgtg gagaaaaacg gatggctaac gcaaggcgga aaatgcctta 1801 cggtgaatca gggctccggc ggcgattggc tcatctacgg agctcactgt gagcttaaca 1861 atggtgctca gcgatggatt ttcgagaaat tggatactta tgaataaaaa atcgattttt 1921 tttcgcattt cccatctcaa taatatcatt tttcccttaa ttttcctgtg attttcccaa 1981 ttttttactc cgttttcccc ttaaaaatgt gccttttttc ctgccttttc cccccctatg 2041 aaattccaat ttttcaatcg atacttgccc ttattaactt tctttttttt caatttttct 2101 acttaatact ttaatttata tgttttaatt gtcatacatg acactgaaaa atttttgcca 2161 aaaatttgaa ttaataaatt ttgtttttt //