Dbfetch
LOCUS NM_001026239 1971 bp mRNA linear INV 09-APR-2019 DEFINITION Caenorhabditis elegans LIM domain family (lim-9), partial mRNA. ACCESSION NM_001026239 VERSION NM_001026239.4 DBLINK BioProject: PRJNA158 BioSample: SAMEA3138177 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1971) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 1971) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (09-APR-2019) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1971) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (16-JAN-2019) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 1971) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003279). On Jun 26, 2012 this sequence version replaced NM_001026239.3. COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1971 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="I" gene <1..>1971 /gene="lim-9" /locus_tag="CELE_F25H5.1" /db_xref="GeneID:3565712" /db_xref="WormBase:WBGene00006407" CDS 1..1971 /gene="lim-9" /locus_tag="CELE_F25H5.1" /standard_name="F25H5.1f" /note="Confirmed by transcript evidence; Product from WormBase gene class lim" /codon_start=1 /product="LIM domain family" /protein_id="NP_001021410.2" /db_xref="EnsemblGenomes-Gn:WBGene00006407" /db_xref="EnsemblGenomes-Tr:F25H5.1f" /db_xref="GeneID:3565712" /db_xref="GOA:G5EF39" /db_xref="InterPro:IPR001781" /db_xref="InterPro:IPR010442" /db_xref="InterPro:IPR037987" /db_xref="UniProtKB/TrEMBL:G5EF39" /db_xref="WormBase:WBGene00006407" /translation="MMLSTMNNPYRGGGNNNSNNNNSNHGMVIEDVTDDPEYSSYGNE NEKPENEEEGAFVEYEKLDKTEDPAAFKVCQATTAVNRTYNNIRPSYRMPIGGGSGSS SGSISREIRIESMNLTDVEDGARCRDKECHLGWKQHPWRKVCVHCKSDRSDHELPPNQ ALNVYNRLGIQPPAGMPQSGVAEPEVPGSVGHGYAWVPPGLSRKKVEEYMSQLPNNVV PRTNSNGEKLREKQLLLQLPRQDLSVAYCRHLTSQTERKVYEEFVNARNEIALDIGYV SSNINKAMECHKCSGILETNEMAVIAPKLGDSTGWHPACFTCQACEQLLVDLTYCVKD NQIYCERHYAELHKPRCSACDELIFAGEYTKAMNKDWHSDHFCCWQCDQTLTGQRYIM RDEQPYCIKCYEDVFANQCDECAKPIGIDSKDLSYKDKHWHEHCFLCSMCKISLVDMP FGSKNDRIFCSNCYDQAFATRCDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIG TKSFIPKNDDVFCGPCYEEKFATRCSKCKKVITAGGVTYKNEPWHRECFCCTNCNSSL AGQRFTSKDEKPYCANCYGDLFAKRCNACTKPITGIGGAKFISFEDRHWHNDCFICAQ CTTSLVGKGFITDGHEILCPECAKARLMAANS" ORIGIN 1 atgatgttgt ccactatgaa taatccatat cgaggcggtg gtaacaataa ttcaaataat 61 aataattcaa atcatggaat ggttattgaa gatgttactg atgatccaga gtactcgtcg 121 tatggaaatg aaaacgaaaa gccggaaaat gaggaagaag gagcatttgt tgagtatgag 181 aaacttgata aaactgaaga tccagctgca ttcaaggttt gccaagcaac aactgccgta 241 aacagaactt acaacaacat tcgtccatct tacagaatgc caatcggcgg aggcagtggc 301 tcatcgagtg gctcaatctc tcgtgaaatt cgaattgagt cgatgaactt aacggatgtt 361 gaagatggag caaggtgtcg ggataaggaa tgtcatcttg gatggaaaca acatccatgg 421 agaaaagtct gtgtgcactg caaaagcgat cgatcagatc acgaacttcc acccaatcaa 481 gcactcaacg tatacaatcg acttggaatt cagccaccag ccggaatgcc ccaatccgga 541 gttgcggagc cagaagttcc tggctcggtt ggacacgggt acgcatgggt tccaccaggt 601 ctctcacgaa agaaggtaga agagtacatg tcacagttgc cgaacaacgt ggtgccacgt 661 acaaattcaa atggagagaa acttcgcgaa aagcagctac tgcttcaatt gccacgtcaa 721 gatctttcag tggcttactg tagacatctg acgtcacaaa ccgaacggaa agtctatgaa 781 gaatttgtga atgcaagaaa tgaaattgca ttagatattg gttatgtctc ttcaaatatt 841 aataaagcta tggaatgtca taaatgctcg ggtatacttg aaacaaacga aatggcagtt 901 attgcaccaa aacttggaga ttcaactgga tggcatccgg cttgttttac atgtcaagct 961 tgtgaacagt tacttgtcga tctgacatat tgtgtcaaag acaatcaaat ctactgtgag 1021 cgacactacg cggagctcca taagccacga tgttcggcct gtgatgagtt aatcttcgct 1081 ggagaataca caaaagccat gaataaagat tggcacagtg atcatttttg ctgttggcaa 1141 tgtgatcaaa cgttgacagg gcagaggtat attatgagag atgagcaacc atattgtatc 1201 aaatgttatg aagatgtgtt cgcaaaccaa tgtgatgaat gtgcaaaacc aattggtatt 1261 gattcgaagg acctatcgta caaagacaag cattggcacg agcactgctt tttgtgtagt 1321 atgtgcaaaa tatctctcgt cgacatgcca tttggaagta aaaatgatcg aattttctgc 1381 tcgaattgtt acgaccaagc atttgcgaca agatgtgacg gatgcaatga gattttccga 1441 gcaggaatga aaaagatgga atacaaaggc aaacaatggc atgataaatg tttctgttgt 1501 gctcattgta aattggcaat tggaacaaaa tcgttcatac cgaaaaatga tgatgtattc 1561 tgtggcccgt gttacgaaga aaagtttgca acaagatgct ccaaatgcaa aaaagtgata 1621 actgctggag gtgtcacata taagaatgaa ccatggcatc gtgaatgttt ctgttgtaca 1681 aattgtaatt catcattagc tggacaacga tttacaagca aagatgagaa accatattgt 1741 gcaaattgtt atggagatct gtttgcgaaa cgatgcaatg catgcacaaa accaattaca 1801 ggaatcggtg gcgccaaatt catttcattc gaggatcgac attggcataa tgattgtttc 1861 atttgtgcac aatgtacaac atctcttgta gggaaaggat ttattaccga tggacatgag 1921 atattgtgtc ccgagtgtgc gaaggcacgt ctaatggcag caaattcata a //