Dbfetch
LOCUS NM_001026088 2128 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Leucine-rich repeat protein soc-2 (soc-2), mRNA. ACCESSION NM_001026088 VERSION NM_001026088.5 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2128) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2128) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2128) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2128) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Feb 2, 2021 this sequence version replaced NM_001026088.4. FEATURES Location/Qualifiers source 1..2128 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene 1..2128 /gene="soc-2" /locus_tag="CELE_AC7.2" /db_xref="GeneID:177286" /db_xref="WormBase:WBGene00004929" CDS 88..1767 /gene="soc-2" /locus_tag="CELE_AC7.2" /standard_name="AC7.2a" /note="Confirmed by transcript evidence" /codon_start=1 /product="Leucine-rich repeat protein soc-2" /protein_id="NP_001021259.1" /db_xref="GeneID:177286" /db_xref="WormBase:WBGene00004929" /translation="METSKEFEFRPAKETSRSKSPGGIVGRLSNFARNKARHSLSEKG SNSVGGSGGAGFDKPRKDLLKEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQLTELF LYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSV IYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLV SYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSEL ESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTIN MEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPE DIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLW VQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPF ELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGPYRGVVMNSQ" ORIGIN 1 acactggatc acgcgcacgc cggttccaag agtgtctcat cggcccgatt accggacgcg 61 ttggcactgt gtctgaaggc tgcgcgaatg gagacatcga aggagttcga attccgtccg 121 gccaaggaga cgtcacgctc caagagtccc ggtggaatcg tcggaagact ttcgaatttt 181 gcgcgaaaca aggcgaggca ttcgttgagt gaaaaaggtt caaattcggt tggtggaagt 241 ggtggagcag gttttgataa accgagaaag gacctcctaa aagaatttca caaatgcaaa 301 gaggcgcagg atcagagatt agatttgagc tcaatcgaga tcacgagcat tccgtcgccg 361 atcaaagagc tcacacagct gacagaattg ttcttgtaca agaacaagtt gacgtgcttg 421 ccaacggaaa taggtcaact ggtgaatctc aagaaacttg gtctctctga aaatgcgctt 481 acatctcttc cggattcact tgcttctctg gaatcactgg aaacattgga tttacggcac 541 aacaagttga cagaggttcc atcggtcatt tacaaaatcg ggtcgctcga aacattatgg 601 ctgaggtaca atcgaattgt ggcagttgac gaacaaattg gaaatctgtc aaaattgaaa 661 atgttggatg ttcgtgagaa taagattcga gagttaccat ctgcaattgg aaaactgacg 721 tcactggttg tgtgtcttgt ctcttataat catttaacac gggttcctga agaaatcggt 781 gactgccatt ccctgactca actcgatctt caacacaacg acctctcaga actaccgtac 841 tcaataggaa aactcgtgaa tcttgttcga atcggaattc gatacaataa gattcgatgt 901 attccaagtg aattggaaag ttgtcagcag ctcgaggaat ttattgtaga gagcaatcat 961 ttgcaattac taccgccaaa cctgctcaca atgcttccaa aaatccacac agtgaatctc 1021 tcacggaacg agttgactgc attcccggca ggcggacctc aacaatttgt gtccacagtc 1081 acaattaata tggaacacaa tcagatttca aagattccaa tcggaatatt ctcgaaagca 1141 acacgattaa caaaactgaa tttgaaggaa aatgagctgg tctcgttgcc tttggacatg 1201 ggatcttgga catcaatcac cgagctcaat ctctccacaa atcaattgaa agttttgcca 1261 gaagatatcg aaaaacttgt gaatctggaa atccttgtgc tgtccaacaa tcaactgaaa 1321 aagcttccaa atcaaatagg aaatctcaat aaactccgcg agctggatct cgaggaaaat 1381 gaattggaga ccgttccaac tgaaatcgga tttttacaac atcttacgaa actgtgggtt 1441 cagtcaaaca agattttgac tctaccaaga tccattggaa atttgtgttc gcttcaagat 1501 ttgcgattgg gagagaacaa tttgacagcg attcccgagg aaattggcca cctcgactca 1561 ttgaaatctc tatacctcaa cgacaactcc tctcttcaca atttgccatt tgagttggca 1621 ctgtgccaat cgcttgaaat aatgtcaatc gaaaactctc cactttctca gattccacct 1681 gaaatcactg ctggtggtcc ttcacttgtg atacaatatc ttaaaatgca aggtccctat 1741 cgaggagttg tgatgaattc tcaataattc ccccaatatt ctacttcaat tcaaaaaacc 1801 atgtttcttg tcttctacgg gttgcaaaac ttgttttcgc tccaaaatgt tttttttaat 1861 gttttatttt tttgaaactg aaaagtcact ttttcttctc aaaatatcat attaatatgg 1921 tacttttcca attcaattgt gtcttcccga ttttttctct caaaaaaggt tttgtttatt 1981 aattattttc aaattgtgaa ttccaaaaac tttctctcgt ccagtttccc agctcccccg 2041 ttgcatttcc cccttcttcc aaaaattttt ttataatttt ttgttccaaa attcttgttt 2101 cttttaatga attctaacaa aatcagaa //