Dbfetch
LOCUS NM_001026081 1832 bp mRNA linear INV 21-JAN-2020 DEFINITION Caenorhabditis elegans Sterile alpha and TIR motif-containing protein tir-1 (tir-1), mRNA. ACCESSION NM_001026081 VERSION NM_001026081.3 DBLINK BioProject: PRJNA158 BioSample: SAMEA3138177 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 1832) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 1832) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (21-JAN-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1832) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (04-DEC-2019) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 1832) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Sep 4, 2019 this sequence version replaced NM_001026081.2. FEATURES Location/Qualifiers source 1..1832 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="III" gene 1..1832 /gene="tir-1" /locus_tag="CELE_F13B10.1" /db_xref="GeneID:175502" /db_xref="WormBase:WBGene00006575" CDS 208..1239 /gene="tir-1" /locus_tag="CELE_F13B10.1" /standard_name="F13B10.1d" /note="Confirmed by transcript evidence" /codon_start=1 /product="Sterile alpha and TIR motif-containing protein tir-1" /protein_id="NP_001021252.1" /db_xref="GeneID:175502" /db_xref="WormBase:WBGene00006575" /translation="MVDGDLLLQLTENDLKHDVGMISGLHRKRFLRELQTLKVAADYS SVDESNLDNFLMGLSPELSVYTYQMLTNGVNRSLLSSLTDEMMQNACGITNPIHRLKL TQAFETAKHPDDVEVAMLSKQIDVFISYRRSTGNQLASLIKVLLQLRGYRVFIDVDKL YAGKFDSSLLKNIQAAKHFILVLTPNSLDRLLNDDNCEDWVHKELKCAFEHQKNIIPI FDTAFEFPTKEDQIPNDIRMITKYNGVKWVHDYQDACMAKVVRFITGELNRTTPTTKE MPSISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFTPTGSQERATSTRRKIQP SASTTSDRN" ORIGIN 1 gaaatcggtg caatccaagc attaaaagaa gtggcctcct ctccagacga ggtcgctgcc 61 aagttcgcct ccgaagcact cacggttatc ggcgaagagg ttccctataa actcgctcaa 121 caagtacctg gctggacatg cgcagatgtt caatattggg tgaagaagat tggttttgag 181 gagtacgttg agaagttcgc taaacaaatg gtcgatggag atcttttact tcaattaact 241 gagaatgatc tgaagcatga tgttggaatg atctctggac ttcatcgaaa acgattctta 301 agagagcttc aaacattaaa agttgctgct gattactcat cggttgacga gtcgaatttg 361 gacaacttct tgatgggatt aagtccagaa ctttctgttt acacctacca aatgctcaca 421 aatggagtca accggtctct tctctcctca ctcaccgacg aaatgatgca aaacgcttgt 481 ggaatcacga acccgattca tcgactcaag ttgacacaag catttgaaac cgcaaaacat 541 ccggatgacg tggaagttgc aatgctctcc aagcaaattg atgtcttcat ttcatacaga 601 agaagtacag gaaaccaact cgcaagtctc attaaagtac tcctccaact ccgcggatac 661 agagtgttca ttgatgtcga taagttgtat gctggaaaat tcgacagctc attgctcaag 721 aacattcaag ccgccaaaca tttcatcctt gttctcacac caaacagttt ggatagactt 781 ttaaatgatg ataactgtga ggattgggtg cacaaagagc tgaaatgtgc atttgaacac 841 cagaagaaca ttattccaat ctttgatact gcattcgaat tcccaacaaa agaagatcaa 901 attccgaatg atattcgaat gattacaaag tataatggtg ttaaatgggt tcacgactat 961 caggatgcat gtatggcaaa agttgtacgt tttattactg gagagttgaa cagaacgaca 1021 ccgaccacca aagaaatgcc ttctatctcc cgaaaaacta cccaacaacg gtggcagacc 1081 acaaatacag taagccgtac tgggccatcc agaagcatcg gtggaccaag aatggaacct 1141 cctacgccaa cgtttacacc aactggatca caagaacgtg caacatcgac gagaaggaaa 1201 attcagcctt ctgcatccac aacttccgat cggaattaag tctcttcttt aatcaataca 1261 tcaagtgccg gttcatttta tccattttcc aacaaaaaac caattttctt caaccatccc 1321 aatatcaaat atcaaactcc caatgtcttt caatcatccc acacgaaagt tttaatgtat 1381 ttgaccctca ttttaaatca gtcaaaacct caaaaaaagt gttccacaaa aaactggaaa 1441 ttcaaagcgt agaatctatg atttcaactg tctctctctc ttcctcattt acccaatgcc 1501 ctgccgtttt ctgcaaataa taataataat tgtaataatc tctataaatt atgtgattga 1561 tgtctttatg aaaccaaaaa gaaaactctg aaacttcact ttcttataat ctttctgttt 1621 atatattccg atctccatct gtttcattcg tttcactttt tctgttttat ttcctgcaac 1681 gtgtaatagt cgatcaaccc ccaactcagg aacccatcaa attcgaaccc tttaactccc 1741 tctttaaatt gaacttttta tcttaacaat taccgggtct aacacccttc cagatttcta 1801 atgttatacc taatgaatgt ttcggattat ta //