Dbfetch
LOCUS NM_001318311 2751 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Ubiquitin-like protease family profile domain-containing protein (ulp-2), mRNA. ACCESSION NM_001318311 VERSION NM_001318311.3 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2751) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2751) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2751) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2751) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Apr 15, 2020 this sequence version replaced NM_001318311.2. FEATURES Location/Qualifiers source 1..2751 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="II" gene 1..2751 /gene="ulp-2" /locus_tag="CELE_Y38A8.3" /db_xref="GeneID:173859" /db_xref="WormBase:WBGene00006737" CDS 60..2195 /gene="ulp-2" /locus_tag="CELE_Y38A8.3" /standard_name="Y38A8.3b" /note="Confirmed by transcript evidence" /codon_start=1 /product="Ubiquitin-like protease family profile domain-containing protein" /protein_id="NP_001305240.1" /db_xref="GeneID:173859" /db_xref="GOA:A0A0S4XR45" /db_xref="InterPro:IPR003653" /db_xref="InterPro:IPR038765" /db_xref="UniProtKB/TrEMBL:A0A0S4XR45" /db_xref="WormBase:WBGene00006737" /translation="MSDSTQMEANAAINEIKKRTRKLDQSLQMRFCADQFFIGNHCTK LASGKSIIISQNSKNRICLRFFMAADPLVGYTGRDFGIAFNQIDHISLKDEQQENPAV LICTLNLSSYTKMCKLQTGLKDVVEKPFLYNKSLARNLTFILKPWNDDPDTFVKISYN DEHREYVHSYDYDVAKSLMFKEVQAVWEQSLKEQLQRRHQTGRVYLTSQLSEMTPREW VQFLADQKLSKIVCHNGSIQYARVEDNPHGRKHTAVATNGFDHRGTRVLNSFGKAHAS LATQEKSYAKKRKLTEQSLKAHGDFTFPQVSFPNTQQGSCLPSTPTAALPPTRPVVEK IPPDTQLFTFPPSGSCTTGMDPVVLLVKDIKTLDRKEFLNDSVMAFMLNYIAFMLSSE LMKSVHMCNTFLFVNLTRLLPPLCFSKRRPIEPEHIKIVKDNCPRVLRWTRKFDVLAK DYIIIPINEDLHWLVIAVINPSGAIVDMSNEEASRAAPKCYIVFFDPLSGLDPSKKNH MCHCIKIYLAQLYENTKAPGMKFASKNPTIYDEERVVVTRAENTPIQDNFYDCGLYVL HFIEGLFCYPNRPVNVNDFPNFDWSKFFPEANKMCDLMRDKVYNLILQQADKPARSRL AKFERENKCGLSREGALRKARRHSAVNERRTKRHRDYYARHYSLSPPHRNVMNDDPTF MNPRGLAEMPITRLVRRLRIPEDNFPIAY" ORIGIN 1 ttcttcattt tcgcataagt tttcgtaatt tcagcttttc tttgtggcct aaaatcaaaa 61 tgagtgattc aactcaaatg gaggccaatg ctgctattaa tgaaattaaa aaacgaacga 121 gaaagctaga ccaatcgctg caaatgaggt tttgcgctga tcagtttttc atcggcaatc 181 attgcaccaa actggcatcc ggaaagtcaa taattatctc gcagaattcc aagaatcgga 241 tatgccttcg ctttttcatg gcagcggatc ctttggtggg ctacactgga cgagattttg 301 gaatcgcttt caatcagata gaccacattt cgctgaaaga tgagcaacaa gagaatcccg 361 ctgtactcat ttgcactttg aacctctcaa gctacacaaa aatgtgtaag ctccaaaccg 421 gcttgaagga tgtcgtcgag aaaccatttc tgtataacaa atctcttgca cggaatttga 481 cattcatact taaaccgtgg aacgatgacc ctgacacgtt tgtgaagatc tcatacaatg 541 atgaacaccg agagtatgtg cacagctatg attacgatgt ggccaagtcc ttaatgttca 601 aagaggtcca agccgtttgg gaacaatcac tcaaagagca gctacaacgt cgtcaccaaa 661 ccggtcgagt ttatttgaca agtcaactca gtgaaatgac tcctcgagaa tgggttcagt 721 ttcttgctga tcagaagcta tctaaaattg tgtgtcacaa cggttctatt caatatgcga 781 gagtagaaga caatccacat ggacgaaaac atacagcagt tgccacaaac ggcttcgacc 841 accgaggaac cagagtattg aattcatttg gcaaagcaca tgcatctctt gctactcaag 901 aaaaatcata tgcaaagaag aggaaactca cggaacaatc tctcaaggct catggtgact 961 tcacgtttcc ccaagtgtcg tttccaaata cacaacaggg ctcatgtttg ccgagtactc 1021 cgactgcagc gctgcctcca actcgaccag ttgttgagaa aatacctcca gatacgcaac 1081 ttttcacgtt cccaccttct ggctcttgca caacgggaat ggatcctgta gtgttgctcg 1141 tcaaggatat caaaacactg gatcgcaaag aattcctgaa tgacagcgtc atggcattta 1201 tgctgaatta tattgcattt atgctttcgt ccgagctaat gaaatccgtg catatgtgca 1261 acacgttctt attcgtcaat ctgactcgcc tacttccacc attgtgcttc tccaaaagac 1321 gaccaatcga accagaacac ataaaaatcg tgaaagacaa ttgccctcga gttctccgtt 1381 ggacacgaaa attcgatgtt cttgccaaag attatattat cattccgatc aacgaagatc 1441 ttcactggct cgtcatcgct gttatcaatc catcgggtgc aattgtcgat atgtcgaatg 1501 aggaagcttc cagagctgct ccgaagtgtt atattgtatt cttcgatccg ttgagtggtc 1561 tcgatccaag caagaagaat catatgtgtc actgcatcaa gatttatttg gctcaattgt 1621 atgaaaacac taaggctcct ggaatgaaat ttgcgtcgaa gaatccaacg atttacgatg 1681 aggagagagt tgtcgtgact cgtgctgaaa acactccaat ccaagacaac ttttatgatt 1741 gtggacttta tgtattgcat ttcattgaag ggctcttctg ttatccgaac cgtccggtca 1801 atgtgaacga ttttccaaac tttgactggt caaagttctt cccggaggcc aataaaatgt 1861 gtgacttgat gcgagacaaa gtttacaatt tgattcttca acaagcggat aaacctgcga 1921 gaagccgtct cgccaagttc gaaagggaga acaaatgtgg attgtcgcgt gaaggagctc 1981 ttaggaaagc acgtcgtcat agtgcagtga atgaacgtcg tacgaaacgg cacagagact 2041 attatgcacg tcactattcc ttgagcccgc cacaccgaaa tgtgatgaac gatgatccga 2101 cgttcatgaa tccacgtgga ttggcggaaa tgccaataac tcgacttgtt cgtcgcctca 2161 gaattccgga ggataacttc ccaatcgctt actaggcatt ttgatcaaaa atttgtctcc 2221 cctctcaaaa attgccggta ttttcttctc ttagttaatt tattttttaa agattttatt 2281 atcctcccat ttttacgctc tctccttatt tctgcgttct ccgtcataaa gtgacaattg 2341 ttattttttc tttataactt gatcactcaa tttaatattt tcagttgatc tccactcttt 2401 tttcctcctt ttattaaaat ttcaatattc tgttccatca attttccttt tgtacaccca 2461 tttcacatct ccgcaacggt ttctaaattt tctatttgac ttcagattgt tttcttaccg 2521 tgtatgcgtt tttccgtcga taaattcgcg tttttaatta atttttttca tgttctgtct 2581 gaagaaaatg gtcgatttcc ataggttctc ttcagcaacc ctggcacgct attagtctcc 2641 gcccactttt ccctgccgca gtttcctatt tgtaagcaaa atgtccgcca aacgattgaa 2701 acgctcattt cacttcattg tttctctgtt ttattaaatt tccagacatt c //