Dbfetch
LOCUS XM_015163811 4938 bp mRNA linear INV 30-SEP-2021 DEFINITION PREDICTED: Drosophila mojavensis glycogen debranching enzyme (LOC6579677), transcript variant X4, mRNA. ACCESSION XM_015163811 VERSION XM_015163811.3 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila mojavensis ORGANISM Drosophila mojavensis Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_025318906.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 30, 2021 this sequence version replaced XM_015163811.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila mojavensis Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4938 /organism="Drosophila mojavensis" /mol_type="mRNA" /isolate="15081-1352.22" /db_xref="taxon:7230" /chromosome="Unknown" /sex="female" /tissue_type="whole fly" /dev_stage="Adult fly" gene 1..4938 /gene="LOC6579677" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns" /db_xref="GeneID:6579677" CDS 108..4724 /gene="LOC6579677" /codon_start=1 /product="glycogen debranching enzyme isoform X4" /protein_id="XP_015019297.1" /db_xref="GeneID:6579677" /translation="MSKDTDSHSIPITEGTNAEHVLYRLKRGSKLRVHPDVALLGRKI LLHTNYPAEGKKFVRTEYRVLGWQLKDGQQITSDAHPDVHVVDTDIFSELTLNMSGTF RFYFSFADVERKADSPPDGALYVQVEPTLHVGPVGAQKIIPLNSVRCQTVMAKLLGPL NTWEAKLRVAKESGYNVIHFTPIQELGGSRSGYSLRDQLCVNSQFAAKKGEKVTFEDV EKIIKKCRQEWGVASICDIVLNHTANESEWLIKHPDATYSCATCPYLRPAFLLDAMLA QCGADIAAGSLEHVGVPAIIDQECHLEALKYQLHNVYLPKVNIHELYQCDVMKYVTEF MAQVRTREPPKNVANKSRFQEIQLIQDSAYRRLGSTINIELALEIFNAFHGDCFDEES RFRKCAETLRHHLDELNERVRAELQGYLTYAIDNCLAGVRYERVQHDGPRVREISIKH SVFMTYFTHTNTEGKTLTEVEADMYGKAGEFFMAHNGWVMGSSDPLLDFAEEQPGRGN VYLKRELISWGDSVKLRFGKRPEDSPYLWKHMTDYVETTARIFDGVRLDNCHSTPLHV AEYLLDAARKINPELYVVAELFTNSDATDNVFVNRLGITSLIREALSAWDSHEQGRLV YRYGGAPVGGFYANPNRDVAPSVAHALFMDLTHDNPSPVEKRSVYDLLPSSALVAMAC CATGSNRGYDELVPHHIHVVDEERPYQEWGKAVDFKTGIIAAKRALNLLHGQLAEEGF SQVYVDQMDPNVVAVTRHSPITHQTVILVAHTAFSYPHPNAGPTNVRPLRFEGVLDEI ILEANLTLKSDKPFDRPAPFKKADNVLNGFTQFELSLQEHIPLSKSQVFETNQYTDGS NTQLNFANLRPGTVVAIRVSMRPDARLSFDRLQQVTNALRLVSGEQCEELKAIVSKLD LTALSRALFSCDQEERDMGLGCSAYDIPNFGPIVYCGLQGFVSLLTEISPRDDLGHPL CNNLRDGNWMMDYIADRLNNFNDLKPLSTWFKATFEPLKNVPRYLIPCYFDAIVSGVY NILVNQVNQLMPSFIRDGHNFTQSLAVSTLQFLAVCNSANLPGFSLALAPPKPPKQCV TLSAGLPHFSTGYMRCWGRDTFIALRGTMLLTGRFTEARFIIIGFASAMRHGLIPNLL DNGVKPRFNCRDAVWWWLYSIAQYVEEAPQGANILKDQVSRIFPYDDSEPHPPGAFDQ LLQDVMQEALQVHFQGLQYRERNAGHEIDAHMTDQGFNNHIGVHPETGFVFGGNSANC GTWMDKMGSSEKAGNRGRPSTPRDGSAVELIGLQYASLRFMQSLSERKIIPHSGVERK GPSGEVTKWSYKEWADRIQKNFDAYFYVKETDTTSVANKKCIYKDSYGATQDWTDFQL RCNFPITLTVAPELCNPKNAWKALEQARKHLLGPLGMKTLDPDDWNYRANYDNSNDST DCTVAHGANYHQGPEWVWPIGFYLRARLIFAKKCGYLDETIAETWAILRAHLREIQTS HWRGLPELTNDNGSYCRDSCRTQAWSVGTVLEVLHDLHSLGADC" polyA_site 4938 /gene="LOC6579677" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgagctcaa taaaaaaaga attgaggaat ttattgtctg gtaaagtgtt attcggccgc 61 agatcacagt tattggtgga aaaaatcata agaaaatagt tttaatcatg agcaaggaca 121 cggactcgca cagcataccc attacggagg gcacaaatgc tgagcatgtg ctttaccgct 181 tgaaacgcgg ctccaagctg cgcgtccatc cggatgtcgc tctgctgggt cgcaagatcc 241 tgctccacac caactatccg gccgagggca agaagttcgt tcgcacggaa tatcgtgtgc 301 tcggctggca gctgaaggat ggccagcaaa tcaccagtga cgcgcatccg gatgtgcatg 361 tcgtggacac agacatcttt agtgagctaa ccctgaacat gtcgggcaca ttccgattct 421 acttcagctt tgccgatgtg gaacgcaagg cggactctcc gccggatggc gctttgtatg 481 tacaggtgga gcctacgctg catgtgggtc ccgtgggtgc ccagaagata atacccctca 541 attcggtgcg ctgtcagacg gtgatggcca agctgttggg cccgctgaac acgtgggagg 601 ccaagctgcg cgtggccaag gagtctggct acaatgtcat ccattttacg cccattcagg 661 agctgggcgg ctcgcgctcc ggctactcgc tgcgcgatca gctctgcgtc aattcccaat 721 ttgcggcgaa gaagggtgaa aaggtcacgt ttgaggatgt ggagaaaatt atcaagaagt 781 gccgccagga gtggggtgta gcttcgattt gtgacatcgt cttgaatcac accgccaatg 841 agtcagaatg gctgatcaag catccggatg cgacatactc gtgcgcaaca tgtccctatt 901 tgcgtccagc tttcctgctg gatgccatgt tggcgcagtg tggcgcggac atagccgcgg 961 gcagcttgga gcatgtgggc gtgccggcca tcatcgatca ggagtgccat ttggaagctt 1021 taaagtacca attgcataat gtctacctgc ccaaggtcaa tatacacgaa ctgtatcagt 1081 gcgatgtgat gaaatatgtg accgagttca tggcccaggt gcgcactcga gagccaccaa 1141 agaacgtggc gaacaagtcg cgattccagg agattcaact gatacaggac tcggcatatc 1201 gacgcttggg tagcacaatc aatattgagc tggcattgga gatctttaat gcttttcatg 1261 gcgactgttt cgatgaggag tcgcgattcc gcaaatgcgc cgagacgctg cgccaccatc 1321 tcgacgagct gaacgagcgc gttcgtgccg agctccaagg ctacctcacc tatgccatag 1381 acaactgcct ggcgggcgtg cgctatgagc gcgtccagca cgacggaccg cgtgtgcgtg 1441 agatctcgat taagcattca gtcttcatga cctacttcac gcacaccaac acggagggca 1501 agacgctgac ggaggtggag gcggacatgt acggcaaggc gggcgagttc ttcatggccc 1561 acaatggctg ggtcatgggc tcttcggatc cgctgctgga ctttgccgag gagcagccag 1621 gtcgtggaaa cgtgtatctc aagcgtgagc tcatctcctg gggcgacagc gtgaagttgc 1681 gcttcggcaa gcgccccgag gacagtccct acctctggaa gcacatgacg gactacgtgg 1741 agacaacagc gcgcattttc gacggtgtcc gcctggacaa ctgtcactcg acgccactgc 1801 atgtggccga gtatctgctg gatgcagccc gcaaaatcaa tccggagctg tatgtcgtcg 1861 ccgagctatt caccaactcc gatgccaccg acaatgtgtt cgtcaatcgc ctgggcatta 1921 cctcgctgat acgcgaagct ctctcggcct gggactcgca cgagcagggt cgcttggtct 1981 atcgctatgg cggcgcgcct gtgggcggct tctatgcgaa tcccaatcgt gatgtggcgc 2041 ccagtgtggc tcatgctctg ttcatggatc taacacatga caatccttcg cccgttgaga 2101 agcgaagcgt gtacgatttg ctgccctcct cggcgctggt ggcgatggct tgctgtgcca 2161 ccggcagcaa ccgcggctac gacgagctgg tgccgcatca cattcatgtg gtcgatgagg 2221 agcgtcccta tcaggagtgg ggcaaagccg ttgacttcaa gacgggtatt attgctgcca 2281 agcgcgctct gaatctgctg cacggccagc tggcagagga gggcttcagc caggtgtatg 2341 tggatcaaat ggatcccaat gtggtcgccg tgacgcgtca ctcgcccatc acacatcaga 2401 cggtcatcct ggtggctcac acagccttca gctatccgca tcccaatgct ggacctacta 2461 atgtacggcc gctgcgcttt gaaggtgtcc tggatgagat catactcgaa gccaacttga 2521 cattgaagag cgacaagccg ttcgaccgtc cagcgccttt caagaaggca gacaacgtgc 2581 tcaacggctt cacccagttt gagctgtcgc tgcaggagca tataccgctc agcaagtcgc 2641 aggtcttcga gacgaaccag tacaccgatg gctccaatac gcagctcaac tttgccaatc 2701 tgcgtccggg cactgtggtg gccattcgcg tctccatgcg tcccgatgca cgcctcagct 2761 tcgatcgcct gcagcaggtc acaaatgcgc tgcgcctcgt gtcgggtgag cagtgcgagg 2821 agctcaaggc gattgtctcc aaattggact tgactgcatt gagtcgcgcg ctgttcagct 2881 gcgaccagga ggaacgcgac atgggcctgg gctgcagcgc ctacgacata cccaactttg 2941 gacccattgt ctattgcggt ctgcaaggct ttgtctccct gctgacggag atttcgccac 3001 gcgacgacct cggccatccg ctgtgcaaca atttgcgtga cggcaactgg atgatggact 3061 acattgctga tcgcctgaac aactttaatg atctaaagcc tttgtccacc tggtttaagg 3121 caacctttga gccattgaag aatgtgccac gctacctcat accttgctac tttgatgcca 3181 ttgtgagcgg tgtctacaat attctggtca atcaggtgaa tcaattgatg cccagtttta 3241 ttcgcgatgg tcacaacttt actcaatcct tggccgtgtc cacgctgcag ttcctcgctg 3301 tctgcaattc ggcaaatctg ccaggcttta gccttgcttt ggccccgcca aagccgccca 3361 agcagtgcgt cacactgtcc gcgggtctac ctcacttctc cacaggttat atgcgctgct 3421 ggggtcggga cacgttcatc gccctgcgtg gcacaatgct gctcaccggt cgcttcacag 3481 aggcgcgttt tatcatcatt ggctttgcgt cggccatgcg ccatggcttg atcccgaatc 3541 tgttggataa tggcgtgaag ccgcgcttca actgccgcga cgctgtgtgg tggtggctct 3601 acagcattgc ccagtacgtg gaggaggcgc cgcagggcgc taatatactc aaggaccagg 3661 tgtcacgtat tttcccgtac gacgattctg agccgcatcc gccgggcgcc ttcgatcagc 3721 tgctgcagga cgtcatgcag gaggcgttgc aggtgcactt ccagggcctg cagtaccgtg 3781 agcgtaatgc cggccatgaa atagacgctc atatgacgga tcagggcttc aacaatcaca 3841 tcggcgtgca tccagagacg ggctttgtgt ttggcggcaa cagcgccaac tgcggcacct 3901 ggatggacaa gatgggctcg tccgagaagg cgggcaatcg tggacgaccc agcacgcctc 3961 gcgatggctc cgccgtggag ctgattgggc tgcagtacgc ctcactgcgt ttcatgcaga 4021 gcctcagcga gcgaaagatt attccgcaca gcggcgtgga gcgcaagggg ccgtcgggcg 4081 aggtgaccaa gtggagctac aaggagtggg cggatcgcat acagaagaac ttcgatgcgt 4141 atttctatgt caaggagacg gacaccacat cggtggccaa caagaagtgc atctacaagg 4201 acagctatgg cgccacgcag gactggaccg acttccagct gcgctgcaat ttccccatca 4261 cgttgacagt ggcgccagag ctgtgtaatc cgaagaacgc ctggaaggct ctggagcagg 4321 cgcgaaagca tctgctgggc cccttgggca tgaagaccct ggatccagat gactggaact 4381 acagagccaa ttatgacaac tcgaacgact ccacagactg cacggtggcg catggcgcca 4441 actatcatca gggacccgag tgggtgtggc ccatcggttt ctatctgcgc gcccggctca 4501 tctttgcgaa gaagtgcggc tacctggacg agaccattgc cgagacatgg gccatattgc 4561 gggcgcattt gcgcgagatt cagacatcgc actggcgcgg cctgcccgag ctgaccaacg 4621 acaatggcag ctactgccgc gactcctgcc gcacgcaggc ctggagcgtg ggcaccgtgc 4681 tggaggtgct gcacgatctg cacagcctcg gcgccgattg ctaagcaaat gatcttaatg 4741 cgaactcaac gaatctctcg ttagctgaga aactattatt ctaattgata cacaaagaaa 4801 aaaaaaagaa agaaaaaagt aatccaatta cacacttaaa tggtagctgc tacaaaggat 4861 ggagttacga gttgttcaat ttgttatcca agttgtggat catccatact ctctattaaa 4921 gttattttat ctatgcga //