Dbfetch
LOCUS XM_012209136 2520 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes CD109 antigen-like (LOC105627860), partial mRNA. ACCESSION XM_012209136 VERSION XM_012209136.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; includes ab initio. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130074.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## COMPLETENESS: incomplete on the 3' end. FEATURES Location/Qualifiers source 1..2520 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..>2520 /gene="LOC105627860" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins" /db_xref="GeneID:105627860" CDS 1..>2520 /gene="LOC105627860" /codon_start=1 /product="CD109 antigen-like" /protein_id="XP_012064526.1" /db_xref="GeneID:105627860" /translation="MEWLGILLLSGIISNVIAEPYYTIIAPKVVRPDSEYHVAASVTG VSTPSTIYVELTGELDTGKIFNISRTIVVEPYSTHILRLNIGETTPGKYKLTARGLSG IDFYKSKDIEYVHKSYSVFIQTDRAIYKPGHKVMFRCIILDSRLRPSIMRPSDVYVIN WIAGPEILEGRITGSPHGVSTLRPDLGPPVTHRLATRPPLAGPYAFSRIPPPVWNKPR VFLMHDILNTWLFTNFSSGYNGKTELRREVPHSITSWVLTAFSVNDAHGLGLIEEPRK LKVFKPFFISVDLPYSVIRGEIVSIQIVVFNYMNKDLTAEVLLTNDGQFDFAEVSNEV HDVPKLELYRRKKVDVKANSGSSVSFMIIPRELGYINIKATANSVLAGDSVEHKLLVN AEGETQYKNKAVLLDLRNAEQANANVTIDIPNNAVPGSEIVQISAVGDVLGPSIQNLA NLIKMPFGCGEQNMLNFVPNIVVLNYLKNTNQLTQAVQSKALKYLDIGYQQELTYRHT DGSFSAFGMSDPSGSTWLTAFVAKSFKQAAEYIAIEDRIITEALQWLSNNQASNGSFP EVGKVSHRDMQGGAAKGLALTAYTLIAFLENEESVGKYRNTINKAVDYIVRNMEGLND TYALSLCAYALNLAKHPYETSAFNFLESKAVTNQDLKWWSKPIPKDNKNPHYSLPRSV DVEMTSYALLSYLKRNLVTDAIPVMKWLVKQRNTEGGFASTQDTVIGLQALAKLAENL SKNTSSVEITYKYGEGEGQGGYMNIRGDNSIILQKKMLPTKTRYVNITAKGKGFVLVQ VSYQYNLNVTGAFPLFTLDPQVDKNSNANHLQLSICSGYVFV" ORIGIN 1 atggaatggc taggtattct attgctatcg ggaataatct caaatgtaat cgcagaacca 61 tattacacta ttattgcgcc gaaagtggta cgtcctgatt cggaatatca tgtagcggca 121 agtgttaccg gcgtatcaac gccatcaacg atatacgttg aactgactgg cgaacttgat 181 acaggaaaaa tatttaacat ttctcggacc atagtcgttg aaccttattc tactcacatt 241 ttacgattaa acattggaga aactacacca ggaaaataca aacttacagc acgcggtctg 301 tccggtattg atttttataa atcgaaggat atcgagtatg tacataaaag ttactcagtc 361 ttcatccaga ctgaccgggc aatttataaa cccggtcata aagttatgtt tcgttgtata 421 atactggatt cgagattgag accgagtatt atgagaccat cggacgtata tgtcatcaat 481 tggattgcag gaccagaaat tttggagggt agaataacgg ggtcgcctca tggggtgtcc 541 acgcttcgac cagaccttgg tccacctgtc acgcacagat tagcgacaag accaccactg 601 gcaggtcctt acgccttctc tcgcatccca ccccctgtct ggaataagcc ccgtgtattc 661 ctaatgcatg acatcttaaa cacctggctt ttcacaaact tctcttcagg atataatgga 721 aaaacggaat tacgacgcga agtaccgcac tctatcacat catgggtatt gactgcattt 781 tctgtcaatg acgcacatgg attaggtctc atagaagaac ccagaaagtt gaaagtgttc 841 aaaccgttct tcatatcggt ggatttgccg tattcggtaa ttcgaggaga aattgtaagc 901 atacaaattg tggtattcaa ttatatgaat aaagacttga cagccgaagt tctgttgaca 961 aacgatggac aatttgattt tgcggaagtt tctaacgaag tccacgatgt accaaaattg 1021 gaattatacc gcaggaagaa agttgacgta aaagctaatt ctggctcgag tgtgtcattc 1081 atgattattc caagagaact aggatatatc aatataaaag caaccgctaa cagcgttttg 1141 gctggcgata gtgttgaaca taaattgctt gtcaatgctg agggagaaac acaatacaag 1201 aataaagcgg tacttttgga tttgagaaat gctgaacagg cgaatgcaaa tgtcactatc 1261 gacataccta ataatgcagt accaggatcg gaaattgtac aaatatctgc agttggtgat 1321 gtcttgggcc ccagtatcca gaatttggca aatttaataa aaatgccatt tggatgcggc 1381 gaacaaaata tgctcaactt tgtaccaaat atcgttgttt taaattatct caagaatacg 1441 aatcaattaa cacaagccgt gcaaagcaaa gcgctaaaat atctggacat tggctaccag 1501 caagaattaa cttatagaca tactgatggt tcatttagcg catttggtat gtcggatcct 1561 agcgggagta catggcttac agcattcgta gcgaaatctt ttaaacaagc ggcggaatac 1621 attgcgatcg aggatagaat cataactgaa gctttgcagt ggttgtccaa caatcaagca 1681 tcaaacggct ccttccccga agtgggaaaa gttagtcacc gtgatatgca gggtggagct 1741 gccaaaggac ttgctttaac agcatatacg cttattgctt tcctagaaaa cgaggaatct 1801 gtgggaaaat atcgtaatac aataaacaag gctgttgact acatcgttcg taatatggaa 1861 ggactaaacg atacatatgc attgagtcta tgtgcttacg ccttaaattt ggcaaagcat 1921 ccatacgaga catcggcatt taatttctta gaatcgaaag ctgtgacgaa ccaagatctt 1981 aaatggtgga gcaagcccat tccaaaagac aataaaaatc cacactattc tttaccgcgt 2041 tctgtcgatg tcgaaatgac atcgtatgct ttactctcgt atcttaaacg taatctggtc 2101 acagatgcga ttcccgtaat gaaatggctc gttaaacaaa gaaatacgga aggtggtttt 2161 gcatcgacgc aagatactgt aatcggactt caagcattgg cgaagcttgc tgaaaacttg 2221 tcaaagaaca cgagttcagt tgaaatcacg tataaatatg gcgagggaga aggtcaagga 2281 ggctatatga acatacgtgg cgataattct ataatactcc aaaagaagat gctacctacg 2341 aaaacacggt atgttaatat aacagcaaag ggtaaaggtt ttgtactagt acaagtttcc 2401 tatcaataca atttgaatgt gactggagca tttccattgt ttacattgga tcctcaagta 2461 gataaaaatt ccaatgctaa tcatttacag ctttcgatat gttcagggta tgttttcgtt //