Dbfetch
LOCUS XM_012209015 3744 bp mRNA linear INV 02-APR-2015
DEFINITION PREDICTED: Atta cephalotes neuroglian (LOC105627735), transcript
variant X1, mRNA.
ACCESSION XM_012209015
VERSION XM_012209015.1
DBLINK BioProject: PRJNA279976
KEYWORDS RefSeq.
SOURCE Atta cephalotes
ORGANISM Atta cephalotes
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_012130074.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Atta cephalotes Annotation Release
100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 6.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3744
/organism="Atta cephalotes"
/mol_type="mRNA"
/db_xref="taxon:12957"
/chromosome="Unknown"
/sex="male"
gene 1..3744
/gene="LOC105627735"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 47 Proteins"
/db_xref="GeneID:105627735"
CDS 1..3744
/gene="LOC105627735"
/codon_start=1
/product="neuroglian isoform X1"
/protein_id="XP_012064405.1"
/db_xref="GeneID:105627735"
/translation="MRLAVCIICTLVLGTSAIVQSPPRISKQPPTDEQLFQVAQKNIN
ENDKPFLIECEAEGEPAPMYRWIKNGKPYLWPAYDDRISQQPGRGTLVISRPQNEDLG
QYQCFAENDWGTATSNSVFVRKAELNSFKDENPVPLSATEGSPFKLTCQPPDGWPKPN
VYWLIQDIAGGIKSINNSRMTLDPEGNLWFSNVTRDDASDDFYYACAATSVFRNEYKV
GNKVLLNVISTGASSGQNKYPPERQYVTRKNEIAMRGKKVELYCIFGGTPLPQMIWSK
NGQVIKPSDRIIQGNYGKSLIIKHVNFEDQGQYTCEASNGVGRAQSYSINLQVMASPY
FTVEPEFVNAAEDETAEIRCEASGVPVPEIKWIRNGKPISEAPENKRRKVTSNSIIIE
RLVKNDTANYGCNATNSFGYVYKDVFINVLALAPDITQPPMNLSSVDGKTIRITCRVF
GAPKPEVKWIRNGQELTGGRYKILDVGDLEIENVIFLDAGTYTCYAKNKLGEVNASAI
LMVKEHTRITDVPEDYEVAAGSTATFRCNAVTDPTLPLTIDWLSNGQPIDFEMEPRFV
RSSDYSLLITKTTELDSGVYTCVARTDLDETRAQATLIVQDVPNAPRLISIKCQSNSA
IVQWIPMGDNRSPILRYTIQYNTTFTPDTWEVAHDQVPATDQTYEVPMSPWANYTFRV
LAWNKIGTSLPSSHSDVCTTLPDLPDKNPENVMGKGTTPQNLVISWTVMPQIEHNGAK
FEYRIFYRRDIRGEDWITNNIHDWRKNTLVVENQPTYQRYRIKVVAINEKGECRVPAK
EVIGYSGEDVPLQAPGNFTVDKPISGTSAYVRWSPVPEDSVRGELVGYKIQTWTERDG
EKGMREIDIRGGNKTEALVEKFVPYSKNYVRMLVYNGRYNGPTSETLNFNTPEGVPGT
VLGLEAFPMGSSALYLAWQPPAEPNGILTGYRIYYQVVNGTKLGTLLERKPDVMDPQA
KSAKLATLAPDTIYRVHIRATTSVGEGNDYFIEQKTKTSQRPDIPQFIWETVPVENGY
SNVRIIWVPNFNGNPGSHFFVRYKLKGETIFLETDPEFQSNSIEVRGLQSGEIYIMSI
VAVDGDYISESAHQEVQTSSEGPIIQPKENVATAGWFIGMMLAIAILLLVLIIVCVIK
RNRGGKYAVHERELAAGRGDYPEEGGFHEYSQPLDTKSAGGRASLASSSHQDGKHPES
DTDSMAEYGDGDTEGMNEDGSFIGQYGRHRKQEPNSQAFATLV"
ORIGIN
1 atgagacttg ccgtgtgcat tatttgcacg ctggtgcttg gcacatcagc tatagttcaa
61 tcaccgccac gaatatctaa acagccacca acggatgagc aattgtttca agtggcacaa
121 aaaaacatca atgaaaatga taaaccattt ctaattgaat gtgaagcgga aggagagcca
181 gctccaatgt atcgttggat taaaaatgga aaaccctatt tgtggccagc gtatgacgat
241 cgcatttctc aacaacctgg tagaggtact ttggttatat caagaccgca aaatgaagat
301 ctaggacaat atcagtgttt tgctgaaaat gactggggta cagctacatc gaattcggtg
361 ttcgttcgaa aggccgaatt aaattcgttt aaggatgaaa atccggtacc attaagcgcg
421 actgaaggtt caccatttaa acttacttgc caaccacccg atggctggcc taagccaaat
481 gtttattggc taattcagga tatcgctggt ggtatcaagt caatcaataa ttcaaggatg
541 actcttgatc cggagggtaa tctctggttc agcaatgtta caagagacga tgcttcggat
601 gatttttact atgcctgtgc cgccacatct gtgttcagaa acgaatacaa agtaggcaat
661 aaggttttgc taaatgtaat ttctacgggt gcgtccagcg gccagaacaa atatcctcct
721 gaaagacagt atgtcaccag gaaaaatgag attgctatgc gcggtaaaaa ggtagaactg
781 tattgtattt ttggagggac acctttgccg cagatgattt ggagcaaaaa tggtcaagtg
841 atcaagccga gcgataggat aattcaagga aattatggta aatctctcat tataaaacac
901 gtcaattttg aggaccaggg gcaatatacc tgcgaagcat caaacggagt gggtcgagcc
961 caatcgtatt ctataaatct acaagtaatg gcctcaccat atttcactgt tgagcccgag
1021 ttcgtaaatg ctgcggagga cgagactgca gaaatcagat gcgaggctag cggagtgccc
1081 gttcccgaaa tcaagtggat ccgtaacggt aaaccgatat ccgaagcgcc ggaaaataaa
1141 agaaggaaag tcacgtcgaa ttccattatc atcgagagat tggtgaaaaa tgatacggca
1201 aattacggat gcaatgctac taattcgttt ggatacgttt acaaggacgt atttataaat
1261 gtgttggccc tcgcaccaga tatcacgcaa ccacctatga acttaagttc agtggatggc
1321 aagaccattc ggattacgtg ccgcgttttc ggcgcgccta aacccgaggt caaatggatc
1381 agaaacggac aagaattaac tggcggtcgt tacaaaattc tagatgtagg cgatttggaa
1441 atcgagaatg tgatattcct agatgccggt acttacacat gttatgccaa aaataagttg
1501 ggtgaggtga atgcatccgc cattttgatg gtgaaagagc ataccaggat aacagatgtg
1561 ccagaggatt atgaggtcgc agccggttct actgccacat ttaggtgtaa tgctgttact
1621 gatcccactc tacctctaac catagattgg ttgagcaatg gccaaccaat agacttcgag
1681 atggaaccga gatttgtacg aagttccgat tattctctgt tgattacgaa gacgactgaa
1741 ttggattctg gtgtctacac atgtgtcgcc cgcactgatc ttgacgaaac gagagcgcaa
1801 gcgacattga tagttcaaga tgtacctaat gcgccgagat taatcagcat taaatgccaa
1861 tccaactcgg ccattgtgca atggatacct atgggagata atagatctcc cattctacgc
1921 tatacgattc aatataatac tacctttaca ccagatacct gggaggtagc tcacgatcaa
1981 gtcccagcta cggatcagac atacgaagtg cctatgtcac cctgggctaa ttacacgttc
2041 cgtgttcttg cgtggaataa aataggtact tctctaccgt catcacatag cgatgtttgt
2101 actactttac cggatcttcc tgataaaaat ccggaaaatg ttatgggcaa gggtacaacg
2161 ccacaaaatt tggttatttc atggacagtc atgccgcaga tagaacataa tggcgccaaa
2221 tttgagtata gaatatttta tagaagagat atacgaggtg aagactggat tacaaataat
2281 atacatgatt ggagaaaaaa tactcttgtg gtagaaaatc aacctactta tcagagatac
2341 agaattaagg ttgtcgcgat aaatgaaaaa ggagaatgta gagttccagc caaagaagtt
2401 atcggatact ccggagaaga cgtaccccta caagcacctg gcaactttac agtagataaa
2461 ccaatatcgg gtacatccgc ttatgtgcgt tggagtcctg tacctgagga ttcggtaaga
2521 ggcgaattag tgggatacaa aattcaaacg tggacggaga gagatggtga aaagggaatg
2581 cgtgagattg atattcgcgg aggtaataaa acggaagcat tagttgagaa atttgttccg
2641 tacagtaaaa attatgtgag aatgctcgtt tacaatggca gatacaacgg tcctacgagc
2701 gagactttaa actttaacac accagaagga gtaccaggga cagtacttgg tctagaagca
2761 ttccccatgg gatccagtgc gttatattta gcgtggcagc cgcccgcaga accgaatggt
2821 attttaaccg gatatagaat ttattatcag gtcgtaaacg gcacaaagtt aggaacgtta
2881 ctcgagagaa agccagatgt tatggatcca caagctaaga gtgccaaatt agccacatta
2941 gcgcctgata cgatataccg cgttcacata cgtgccacaa ctagtgtcgg tgaaggcaat
3001 gactatttta tcgaacaaaa aacaaaaacg tctcaacgac ctgacatccc acaatttata
3061 tgggaaactg taccagtgga gaatggatat tcaaacgtta ggatcatttg ggtgccgaat
3121 tttaacggta atccgggaag ccatttcttc gtcagatata agctgaaagg tgaaacgata
3181 tttttggaga cggatcccga attccagtcg aatagtattg aggttcgcgg tcttcaaagc
3241 ggcgaaatct acataatgtc aattgtcgct gtcgatggag attatataag cgagagtgct
3301 catcaagaag tacaaacaag tagcgaaggg cccattattc aaccgaaaga gaatgtagcg
3361 acagctggtt ggttcatagg aatgatgtta gcaatcgcca tccttctttt ggtgctgata
3421 atcgtatgcg taattaaacg aaatagaggc ggaaagtatg cggtacacga gcgagaattg
3481 gccgctggac gtggggacta tcccgaagaa ggtggattcc atgaatactc gcaaccattg
3541 gacaccaaat cggctggcgg acgcgcgtcc ttggcgtctt cttctcatca ggatggtaaa
3601 catcctgaat ctgataccga ttccatggca gaatatggcg atggtgatac agagggcatg
3661 aatgaagatg gttctttcat tggtcagtat ggccgacatc gtaagcagga accaaattcg
3721 caagcatttg ccaccctagt ttaa
//