Dbfetch
LOCUS XM_012208700 2010 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes ADP-ribosylation factor-binding protein GGA1 (LOC105627417), mRNA. ACCESSION XM_012208700 VERSION XM_012208700.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; corrected model. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130073.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-37 ADTU01007469.1 3184-3220 38-198 ADTU01007469.1 5385-5545 199-432 ADTU01007469.1 7752-7985 433-606 ADTU01007469.1 9125-9298 607-826 ADTU01007469.1 10239-10458 827-1162 ADTU01007469.1 10917-11252 1163-1295 ADTU01007469.1 11424-11556 1296-1488 ADTU01007469.1 12148-12340 1489-1639 ADTU01007469.1 12342-12492 1640-1806 ADTU01007469.1 13478-13644 1807-1917 ADTU01007469.1 14713-14823 1918-2010 ADTU01007469.1 16077-16169 FEATURES Location/Qualifiers source 1..2010 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..2010 /gene="LOC105627417" /note="The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 2 Proteins" /db_xref="GeneID:105627417" CDS 1..2010 /gene="LOC105627417" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: ADP-ribosylation factor-binding protein GGA1" /protein_id="XP_012064090.1" /db_xref="GeneID:105627417" /translation="MDVVTTSLEALIQRVTNPQNQKPDVAAIEAFCVMLTKEAEGIQI GIKLLAIQIQSLNESEALQALSLLDTCMKRCGPLFHAEVGKFRFLNEMIKLVSPKYLG NRTTASVRQKVLQLLYAWIKEYPRESKIKEAYEMLKKQGVIEEDAAFIMANNEESKKS SKIKNNIFENEEMSKHLRRLLHSKDPSDLQSANRLIKFMVKEDEERLQLNSRRGMELE SVQNNVMLLSEMLDSYNQNETSTEDLELMKELYQACERLKPILLRLASETQGNVEMLG NVLAASDELNQVFEKYTSIIVLGQFPKSTTEASKPTYNEPSLLDLSSPTEMISCKNSL SMMQSTSSTDHRSDMDVLGDIFNVLEKPMKSETNFLMPNAIMQPISISPMNKKSEITN TDEEKIDSKAKALEELNELGETLLKQSLSGTVSTTRLSQGKTNNNVTKIQNTYDPSKK QNSSHNSNNILQHIATEQPNTRKCERNSNLDIFASSNSSKINVDLCKKNSNSEIMDVK IQSQEMTQLQNGMSRIANIEPEIKPLTDITVCLEDIKPGTNPPITVIEEKNGVSVVLH FAQDSPRSDVSVIVITTMSKNAKPLNNYLFQAVVSKKCKCRLQAPSGTKLPPHNPFLP PSAITQIMLIANPLKEPVSLKCMLSYTMDDETVTEMGEVDTLPNL" ORIGIN 1 atggatgtgg tgactactag cttagaagct ctaatacaaa gagttacaaa tccacaaaat 61 cagaagccag acgtagcagc gattgaagca ttttgtgtga tgcttaccaa agaagcagag 121 ggtatacaaa taggtatcaa gttattagca atacaaattc aatcacttaa tgaatcagaa 181 gcactgcaag cactttcgtt attagatact tgtatgaaga gatgtggccc attatttcat 241 gcggaagttg gtaaatttcg tttccttaat gagatgataa aattggtttc gccaaaatat 301 ttaggtaatc gcactacagc gagtgtacgg caaaaggttt tgcaacttct ttatgcatgg 361 atcaaagaat atcctcgcga atcaaaaatt aaggaagctt atgaaatgtt gaagaaacaa 421 ggagtcatcg aggaagatgc tgcatttata atggcaaaca atgaagaaag taaaaaatcg 481 tctaagataa aaaataatat attcgaaaat gaagagatgt caaagcattt gcgtagatta 541 cttcatagta aagatccttc tgatttacaa tctgcaaacc gactgattaa atttatggtg 601 aaagaggatg aggaacgact gcagttaaat tctcgaagag gcatggaatt agaatctgtg 661 caaaacaatg taatgctact atcagaaatg ctagattcgt ataatcagaa tgaaactagt 721 acagaggatc ttgaattaat gaaagagtta tatcaagcat gcgagcgatt gaaacctatt 781 ttgttgagac tcgccagcga aactcagggc aatgtcgaaa tgcttggtaa tgtactagct 841 gcgagtgatg agttgaatca agtttttgag aagtatacat ctattatcgt tcttggacaa 901 ttccccaaat ctacgacaga ggcttctaag ccaacttaca atgaaccatc ccttctggat 961 ctatcatccc ccactgagat gatttcctgt aagaacagtt taagcatgat gcagagcaca 1021 tcgtcgacgg atcatcgttc agatatggac gtgctcggag atatctttaa tgtattagaa 1081 aaaccaatga agtctgaaac aaatttttta atgccaaacg ctataatgca accaattagt 1141 atctcgccca tgaataagaa aagcgaaatt accaacactg acgaagaaaa aatagacagt 1201 aaagcaaaag cattggaaga attgaacgaa ttgggcgaaa ctttacttaa acaaagttta 1261 tcgggtacag tgtcaactac acgcttgtca caaggcaaaa caaataataa cgtgacaaaa 1321 attcaaaaca cttatgatcc cagtaaaaaa caaaattcgt cccataattc taataatata 1381 ttgcaacata ttgcaacaga acaaccgaat acgaggaaat gtgaaagaaa tagtaattta 1441 gacatttttg catcttcaaa ttcgtcaaaa attaatgttg atttgtgcaa aaaaaatagt 1501 aattcagaaa taatggatgt aaaaatacag tcacaggaaa tgacgcaatt gcagaatggt 1561 atgtcaagga tagcaaatat tgagcctgaa atcaaaccat tgactgatat cactgtctgc 1621 cttgaagata ttaaaccagg gacaaatcca cctataacag taattgagga aaaaaatggc 1681 gtaagtgtgg tgcttcattt tgctcaggat agccctagat cagatgtatc tgtaatagta 1741 attactacaa tgagtaaaaa cgcaaagcca cttaataatt atttatttca agcggttgtg 1801 tctaagaaat gcaaatgtag actgcaggca ccttctggaa caaagctgcc accgcataat 1861 ccattcctcc ctccatccgc aatcacacag attatgctga ttgcaaatcc tctcaaggag 1921 cctgtatctt tgaagtgtat gttaagctac acaatggatg atgaaacagt tacagaaatg 1981 ggtgaagtag acacgttacc taatctgtga //