Dbfetch
LOCUS XM_012206233 4239 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes uncharacterized LOC105624883 (LOC105624883), mRNA. ACCESSION XM_012206233 VERSION XM_012206233.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; includes ab initio. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130156.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..4239 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..4239 /gene="LOC105624883" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:105624883" CDS 1..4239 /gene="LOC105624883" /codon_start=1 /product="uncharacterized protein LOC105624883" /protein_id="XP_012061623.1" /db_xref="GeneID:105624883" /translation="MGNATTKDYSRSISVGTSSKKTRWDNPGLPAPPGRPILISGTNE TQPDLVAIRWERSPSNGGSAIVGYLIEHRRLGSPHWIRSTSGLCAFPELTLSGLEPGW RYQFRVRAQNALGFSQSSEVSEPLTVTLQRAAVACAPHFDLELKDTVALENEQTEFVI HFSGTPLPKISWFKDGFEIFSSRRTRIITDNGKSVLLIHQTALNDEGEIKCTATNRAG HVATKAKLILEASPRIRLPRQYEDGLLFEQDETIRLKVSLAGRPTPFVTWYHDGELIS KDIRHIFEVMDGESVLRIPDAKRNDRGEYTVKVANKLGEDTASFLVTVTDRPAAPGKI AVAMTLGRSVTLSWKEPEDDGGCKIGTYIIEYYRIGWEVWLKAVTSRRTTATLTELIE GSEYKFRVKAENPYGVSDPSEESDVIFIPDIKRRIVTPSLNEKSQSHREISRSRGDKR EREVSFTMPAQRTRSLTREEAKIRDDESNSRFKYDERSASVQRLAMPTSTLDRPSRAD SKVTFALDTLEKEEPPIPPVRSREHNSTKQQVFLRNHTNQSNIAINAKDKQDVITKEE TTMTLKSIPTMQVSSPIIEDNITSHFIIKERSLSPLNVPRIQEYQNEENRTTANYQFL LSSNSIPKKQTVVNELLSLDNLQSQRILQEHDENALHGSSEFMLVLYPEDETQEEDIS MENSTEIRVKSSINDKQNMIELIEDEDDLIPPPISLSLPELFSAQHQMVEIMREAVSS TELLHERAMERFYRAVAAEEASETAKQKTQFEKQTKLTLLDVESVQRPSLRRRLSNSG TTTKNLIISWQAKKNRRRLSEGQTDAASKTLKLLSPVLLLDVEARSDPNLPSEMIMAD PWEKSNKVEFVERLRRWHETTVPLLKEVQQEESIQMYNEEKVIIPSSITVDKVESQSL AQTKETEKEKNISIETSEESSEEISSADSEDLKLLKSRILARQIIDEEDTYHPRGKPI PHVEPELQISYDRLPICEISSLSPIRTVTSASSNNVMPKSILKKPKDEMTITQNNFGR SIPPEKPIRKALSQSYQQEDIEEINMDTNNKILNLPMSIVSETLKTPTMSESDTDSII SAAEAAKSRRMQSKLRSITPEEEAAEIEAKMAVINQYTEIVREYSSHSRHGSAASSRR SSFSEDQDQKYRVQEKHAPKLIDKQDQNKKLKLKIKNKNEINEEKKDNQASYSKRESV DARGTTPTRNAMTAKRKSRPNSRDQSPAARRSERIGGTSSRSSSKTRNRTPSKERNNR SLTKNELNEHDFRRSKISSRPSSRSSSRSSSRERFGTTVPIESKVEKLQKALENSKHR AMKKEIEETKENARENCFNQANGKLALDAKRTVRSTVSYITDLTLLIAAMYIYFFKKE TLAIPFIVLLLYRKIQEEIHGWMPRRWKRSTKKY" ORIGIN 1 atgggcaacg ctaccacgaa agattattca agaagtatct ccgttggcac cagctcgaaa 61 aaaacgcgtt gggataatcc aggtcttccg gccccaccag gcagacctat cttgatttcg 121 ggaacgaacg aaacgcagcc agatcttgtt gcaatacgat gggagagatc accaagtaat 181 ggtggatcgg cgatcgtcgg atacttgatc gaacatcggc gactaggctc tcctcattgg 241 atacgaagca cctccggtct ttgtgctttt ccagaactaa ctctcagtgg gcttgagcca 301 ggatggcgtt accaatttcg agtcagagca caaaacgcac ttggattttc acaatcaagc 361 gaagtctccg aaccactcac agttacttta caaagagccg ctgtcgcttg cgctcctcat 421 ttcgatctag agcttaaaga tacggttgca ctcgaaaacg aacagactga atttgtcata 481 cacttctctg gtacaccatt gccaaaaatt tcatggttta aagacggttt cgagatcttt 541 agtagtagac gcactagaat tattacggat aatggaaaaa gtgttctctt gattcatcag 601 accgcgctta atgatgaggg tgaaattaaa tgtaccgcca ccaatcgagc aggtcatgtt 661 gctaccaaag ctaaattaat tcttgaagca tctccacgga tacgattgcc acgtcaatat 721 gaagatggtt tactttttga gcaagatgag actattagac tgaaagtatc tttagcaggt 781 agaccaacgc cttttgtcac ctggtatcat gacggagaac tgatatccaa agatattaga 841 catatatttg aagtgatgga tggtgaatca gtattgagaa taccagatgc caaacgaaat 901 gatcgaggag aatacactgt taaagtcgca aataaattag gcgaagatac tgcgtctttt 961 ctagtcactg tgacagatcg acccgctgct cctggtaaaa tagctgttgc gatgacacta 1021 ggtagatcgg tgacgttgtc gtggaaggaa ccagaagatg acggcggatg taaaatcggg 1081 acttatatta tcgagtacta cagaattggc tgggaggtat ggcttaaggc agttacaagc 1141 agacgcacaa ccgcaacatt aactgaatta atcgaaggtt ctgaatacaa atttcgtgtg 1201 aaagctgaga atccttacgg agtcagtgat ccgagtgaag aaagcgatgt tattttcatt 1261 ccagacatta aacgaagaat cgtaacaccg tctttgaatg aaaaatcgca aagtcatcga 1321 gagatcagca gatctcgtgg tgataaacga gagagagagg tgagtttcac tatgccagcg 1381 caaagaacta gaagtctaac aagagaagaa gctaaaatcc gagacgacga aagtaatagt 1441 cgctttaaat acgatgagcg atcagcttcg gtgcaacgac tcgcaatgcc aacttctaca 1501 ttggatagac cgtccagagc cgatagtaaa gtaacatttg cactggatac tttggaaaaa 1561 gaagaacctc cgattcctcc ggtcagatca agagagcaca attccacgaa gcaacaagtt 1621 tttcttagaa atcataccaa ccaatcaaat attgcgataa atgcgaaaga caagcaagat 1681 gttattacga aagaagaaac aacaatgaca ttaaaatcaa taccaactat gcaagtctct 1741 tctccaatta tcgaagacaa tatcacgtca cattttataa tcaaagaaag gagtctctct 1801 ccactcaacg tgccaagaat tcaagaatat cagaatgagg agaatcgtac tacagcgaac 1861 tatcaatttt tattatcatc aaattcaatt ccaaaaaaac agaccgttgt aaacgaatta 1921 ttatcattgg ataatttgca atctcagaga atattgcaag agcatgatga gaacgcatta 1981 cacggtagct cggaattcat gcttgtttta tatccagaag atgaaacaca agaggaagat 2041 atcagcatgg agaactctac agaaattcga gttaaaagca gtataaatga taaacagaat 2101 atgattgagt taatagaaga tgaggatgat ctcataccac caccaatatc attatctctt 2161 ccagaattat ttagcgcgca gcatcaaatg gtggaaataa tgcgagaagc ggttagctct 2221 actgaacttc ttcacgaacg agctatggaa cgcttttatc gcgcagttgc tgctgaagag 2281 gcatccgaaa ctgccaaaca aaaaacgcaa tttgagaaac aaaccaaact gacactatta 2341 gatgtcgaat ctgttcaaag accatcgctt cgaagacgct tatccaattc tggtactact 2401 acgaaaaatt taatcatttc ctggcaagcc aaaaagaatc gtcgaagatt gagcgaagga 2461 caaacagatg cggcatcaaa aacattaaaa cttctttcac cagttttgtt attggatgtt 2521 gaagctagat cagacccaaa tcttccctct gaaatgataa tggcagaccc ttgggaaaag 2581 agcaacaaag tcgaattcgt ggaacgtctg cgtagatggc acgaaacgac tgtgccgtta 2641 ttaaaagagg tgcaacaaga ggagtcgatt caaatgtata atgaagagaa ggtgataatt 2701 ccatcatcca ttactgtgga taaagtagaa tctcaatcgc tggctcaaac aaaggaaaca 2761 gagaaagaga aaaatattag cattgagact tccgaagagt catcagaaga gatcagtagt 2821 gcagacagcg aggatttgaa attattaaaa tcaaggattc tggcaagaca aattatcgat 2881 gaagaagata cttatcatcc taggggaaaa ccaataccac atgtcgaacc agaactacag 2941 atttcgtatg acaggttacc aatttgtgag atttcatctc tttcacccat cagaacggtt 3001 acttccgcct catctaataa tgtgatgccc aaatcaatcc taaaaaagcc caaagacgaa 3061 atgacaatta ctcagaacaa ttttggtaga tcgattcctc cagaaaaacc aattaggaag 3121 gcattatcgc aatcgtatca acaagaagat atagaagaga taaatatgga tactaataac 3181 aaaattttga atcttcctat gtctattgtg tccgagactc taaagactcc tacgatgtca 3241 gaatcagata cagatagtat tatatctgca gcagaagcag caaaaagtcg aagaatgcaa 3301 tcgaaattgc gatccataac acctgaagaa gaagcagccg aaatagaagc taaaatggct 3361 gttataaatc aatatactga gatagtgcga gaatattcga gtcattcacg acacggtagc 3421 gcagccagct ctcggagatc ttcattttct gaagatcaag atcaaaagta tcgagtacaa 3481 gaaaaacatg caccaaaatt aatagacaaa caagaccaga ataagaaatt aaaattaaaa 3541 attaaaaata agaatgaaat caatgaagaa aaaaaagata atcaagcatc gtattctaag 3601 agagaaagcg ttgatgctag aggtacgact ccaacgagaa atgcgatgac tgcgaagcgt 3661 aaaagtagac caaactccag ggaccaatct ccagctgcga gaagaagtga aagaatagga 3721 ggtacttctt caagatcatc ttcgaagacc agaaatcgta caccttctaa ggaaagaaat 3781 aatcgatctt taacaaaaaa tgaattgaac gagcatgatt ttcgtagatc taaaatatct 3841 tctagacctt cctcgcgctc ctcatcacga tcaagttcta gggaaagatt tggaacgaca 3901 gtaccaatag aatcgaaggt tgagaaattg caaaaagcac tcgagaatag taagcatcga 3961 gcaatgaaaa aagaaataga agaaactaag gagaatgcac gagaaaactg ttttaatcaa 4021 gcaaacggaa agttagcttt agatgctaaa agaacagtca gatcgaccgt aagctatata 4081 accgacttga cattactaat agctgcaatg tatatttatt tctttaaaaa ggaaactttg 4141 gcgattccgt ttatcgtgct tcttctatat cggaaaatac aagaagaaat acatgggtgg 4201 atgccacgtc gttggaagcg atctaccaag aaatattaa //