Dbfetch
LOCUS XM_012205008 3048 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes DNA topoisomerase I, mitochondrial (LOC105623621), mRNA. ACCESSION XM_012205008 VERSION XM_012205008.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130125.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3048 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..3048 /gene="LOC105623621" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins" /db_xref="GeneID:105623621" CDS 1..3048 /gene="LOC105623621" /codon_start=1 /product="DNA topoisomerase I, mitochondrial" /protein_id="XP_012060398.1" /db_xref="GeneID:105623621" /translation="MELEQATPQMNVDLEKKIKESGGGGDGVSVSGNHSDHINGMSNG FDKKREHKSEHRDKDRERSHKSDHKDRSKDKERNHKSEHRDKDKHRHSSSSVKDKEKH DGSNSKDKDRKSSSSKDKEHKSSSSSNKDKEKDKTRDKEHHHKSSSSSKNKDRHSSSK DKDSSSKDKDRHRHSSSLNSSSRDKDKDRSISKDKDSKKHSSEKDRHSTSHSSNEKHR SSEKDKDKHRESLSSKDKHRHDKDKDRHRHDKDKSKHREEKEKKDKEEIKVKEDPNVK MNHSSEGYYNLEIKTEIKEEPMTQPEFDDDDDSGGERPLYIKEDDDDEPIKENASMDS TDGNDTRLSDLHNTTIKTENDSEEEDEPLLSESKVSSRVKRKIESDEDEDVPLSTRKK AKKATNQKTKKKKRKHADDDDDDDYDAEPEDTPKPKKKTTKVKTEGEVSPRKKKQEEE QQEVWKWWEEEKKSDGTKWYFLEHKGPVFAPPYEPLPPNIKFYYNGKEMKLSEETEEV ATFYARMLDHDYTTKFAFNNNFFHDWREVMTESERAKITDLSKCNFKEMHAYFLQKSE ERKAMTKDEKLKIKEKNEEIQKEYGFCSIDGHKEKIGNFKIEPPGLFRGRGEHPKMGK LKKRVLPEDVLINCSKDSNIPKPPAGHKWKEVRHDPNVTWLASWTENIQGQVKYVMLN PSSKLKGEKDWQKYETARKLAQSIDKIRAEYRDDWKSKEMRIRQRAVALYFIDRLALR AGNEKDEDQADTVGCCSLRVEHIKLHEQKGGKEYVVVFDFLGKDSIRYYNEVPVEKRV FKNLQLFMENKSPGDDLFDRLNTTVMNKHLNELMEGLTAKVFRTYNASWTLQQQLDKL TDPNETEAEKILSYNRANRAVAILCNHQRSVPKTHAKSMENLKAKIDTKKAVIAECEQ QVKDAKRDAKHGSVKEKVTYEKKKKQLERFKDQLTKLEVQATDREENKEIALSTSKLN YLDPRISVAWCKKHNVPIEKIYNKTQRDKFRWAIDMAGPDYVF" ORIGIN 1 atggagctcg agcaggcgac accacagatg aacgtggatc tggaaaagaa gatcaaggag 61 agcggcggcg gcggcgacgg cgtctccgtc tccgggaatc atagcgatca tatcaatggc 121 atgtccaacg gtttcgacaa gaaaagggaa cacaaatcag aacatagaga caaggacaga 181 gaacgatctc acaaatcgga tcataaagat cggagcaaag acaaggaaag gaatcataaa 241 agtgaacaca gggataagga caaacataga catagctcca gttctgttaa ggataaggag 301 aagcatgatg gtagcaatag taaagacaag gatagaaaga gttcgtctag taaggacaag 361 gaacataaga gtagcagttc atctaacaaa gataaggaaa aggacaaaac cagggacaaa 421 gaacatcatc acaaatccag ctcgagctcc aaaaataaag acaggcacag cagttctaag 481 gacaaggaca gctcgagcaa ggataaagat aggcatagac acagtagttc cttgaactct 541 agctcgcgtg ataaggataa ggaccgcagt atttcaaagg acaaggatag taagaagcac 601 tcatcagaaa aggacagaca ttccacttct cactcttcga atgagaagca tcgttcctcg 661 gaaaaagata aggacaagca cagagaaagt ttgtccagca aagataagca tcgtcatgat 721 aaagacaaag atcgccatcg ccatgataag gacaaatcca aacatcgcga agaaaaagaa 781 aagaaggata aggaggagat caaagtaaag gaagacccga acgtgaagat gaatcactca 841 agtgaaggat attacaactt agaaatcaag actgagataa aagaggaacc catgacgcaa 901 ccggaatttg atgatgatga tgatagcggt ggtgagcgac cactttatat taaggaggac 961 gatgatgatg aaccaattaa ggagaatgct agtatggatt cgacggatgg aaatgacacc 1021 aggctgtcgg atctccacaa tacgaccata aagacggaaa atgactcgga agaagaggat 1081 gaaccattgt tatcggaatc taaggtatcg tcaagagtaa aaagaaaaat cgagtcggac 1141 gaagatgaag acgttccgct gtcaacgcgt aagaaagcca agaaagctac taaccagaag 1201 actaagaaga agaaacgaaa acacgcggat gatgatgatg atgatgatta tgacgccgag 1261 cctgaagata caccgaaacc aaagaagaag accacaaagg taaaaacaga aggcgaagta 1321 agcccgagga aaaagaaaca agaggaggag cagcaggaag tttggaaatg gtgggaggaa 1381 gagaagaaaa gcgatgggac gaaatggtat ttcttggaac acaaaggacc agtatttgca 1441 ccaccctatg aacccttacc tcctaacata aaattttact ataacggcaa agagatgaag 1501 ctgagcgagg agacagagga ggtcgcaacc ttctatgcgc gaatgctcga ccatgactac 1561 acgacaaagt ttgctttcaa caacaacttc tttcacgact ggcgagaggt gatgactgag 1621 tcggagcgtg ccaaaatcac cgatttgtcc aaatgcaact tcaaagagat gcatgcgtac 1681 ttcttgcaaa agagtgagga gcgcaaagcc atgactaagg atgaaaagtt gaagatcaag 1741 gagaagaatg aggagataca aaaagaatat ggtttctgca gtattgatgg ccataaggaa 1801 aagattggta acttcaagat tgagccgccc ggattgttta gaggccgtgg tgagcatcct 1861 aagatgggca aattgaagaa gcgagttcta ccagaggatg tgctcatcaa ctgttcgaaa 1921 gattcaaata taccgaaacc accggccggt cataagtgga aggaggtgcg acacgatccg 1981 aatgtaacat ggctggcttc ctggacggag aatattcagg gccaggtgaa gtacgtgatg 2041 ctaaatccat ccagcaagct caagggcgag aaagattggc agaagtacga gacagcgcgg 2101 aagctggcgc agtcgattga caaaattcgt gcggagtatc gagatgactg gaaaagtaag 2161 gaaatgcgca ttagacaacg ggctgttgct ctgtatttca ttgataggct ggcgctcaga 2221 gccggtaatg agaaagatga ggatcaggcg gatactgtag gttgttgctc attacgagtg 2281 gagcatatca agctgcatga acagaagggc ggcaaggaat acgtcgtcgt atttgatttc 2341 ttaggtaaag attctattcg atattacaac gaggtgccag tagaaaagcg cgtttttaag 2401 aatctacagc tcttcatgga aaacaaatcg cctggagacg atctgtttga tcgtctcaac 2461 actaccgtga tgaataaaca tctgaacgag ctgatggaag gtttaaccgc taaagtattc 2521 agaacttaca acgcatcgtg gacgctgcag cagcagctcg ataagttgac tgatccgaac 2581 gaaacagagg cagagaagat tctctcgtac aatcgagcca atcgcgccgt tgccatattg 2641 tgtaatcatc agcgttcagt accgaagaca catgcgaaat ccatggagaa cctaaaggca 2701 aagattgaca caaagaaagc agtgatagcc gagtgtgagc agcaagtaaa ggacgctaaa 2761 cgagatgcaa aacacggttc agtgaaggaa aaagtaacat atgaaaagaa gaagaaacaa 2821 ctagaaagat ttaaggatca attaacaaag ctggaagttc aagcaactga ccgagaagag 2881 aataaagaga ttgctctgag tacctctaaa ttgaattatc tcgatcctag aatttccgtt 2941 gcttggtgca aaaagcataa cgtcccgatc gagaagatct acaacaagac tcagagggat 3001 aagttccggt gggcaataga tatggccggt ccagactatg tgttttaa //