Dbfetch
LOCUS XM_012204940 1524 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes cytochrome P450 4C1-like (LOC105623545), mRNA. ACCESSION XM_012204940 VERSION XM_012204940.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; corrected model; includes ab initio. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130066.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 3% of CDS bases frameshifts :: corrected 2 indels ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-166 ADTU01002145.1 12535-12700 167-261 ADTU01002146.1 5-99 262-352 ADTU01002148.1 1732-1822 353-541 ADTU01002148.1 2187-2375 542-605 ADTU01002148.1 3141-3204 606-732 ADTU01002148.1 8073-8199 733-790 ADTU01002148.1 8268-8325 791-885 ADTU01002148.1 11674-11768 886-954 ADTU01002148.1 11835-11903 955-1132 ADTU01002150.1 215-392 1133-1309 ADTU01002150.1 4205-4381 1310-1368 ADTU01002150.1 4455-4513 1369-1392 ADTU01002150.1 7005-7028 1393-1437 ADTU01002150.1 7031-7075 1438-1519 ADTU01002150.1 7078-7159 1520-1524 ADTU01002150.1 7279-7283 FEATURES Location/Qualifiers source 1..1524 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..1524 /gene="LOC105623545" /note="The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 232 long SRA reads, 29 Proteins" /db_xref="GeneID:105623545" CDS 1..1524 /gene="LOC105623545" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: deleted 4 bases in 2 codons" /codon_start=1 /product="LOW QUALITY PROTEIN: cytochrome P450 4C1-like" /protein_id="XP_012060330.1" /db_xref="GeneID:105623545" /translation="MLFVIIALSLTCVAISFFVQNYRLFFAFLTMKPLLEPLSLPFIG IFLFLYRYNSMVWTKFTETYSSPFRICLGPYLFIVVHELDQIKAVLKNRHSLDKSIVY NCLKPVFDMGLLTASESTWTESRKIIAPAFGMMPMKEYFNIFVQESLILTEDLEKIAQ SENEIECLDHLCRCTLKIACDTMMGVKMERNLIDEWWKISASQRQIWQYRFRNVLLVP DIIFNFTSWRGKQQECLNSFHSIIEKIIQQRTNESSTMFTNNDTSHTRFYDILMHSFR NGKFTQKEIMDNIFTMLGASSDTTATVVHFVIIMMANFPETQEKAYKELLEIYGTETP KFAPVKYEDLQHMHYLDCIIKETLRLFPIVPMIGRKLTEDLKMGEFVLPKGADVIISL MGMHRNEKYWPNPLMFNPDRFLQEKTNCVPYYYIPFSDGPRNCIGLKYAMMSMKVILA TLIRTFCKKFRRNRQHRSYQRQGCVAHNHWQDGNLSIWRRPRISHYYCSDVNNMMTN" ORIGIN 1 atgttgtttg ttattattgc attaagttta acatgtgttg caataagttt ttttgttcaa 61 aattatcgtt tgttttttgc ctttctaacg atgaaaccgt tacttgaacc actaagccta 121 ccatttatcg gcatttttct ttttttatac cgatataatt ccatggtttg gactaagttc 181 actgaaactt attcatctcc atttcgaata tgcctaggcc catatttatt catcgtagtg 241 catgaactag accaaataaa ggctgtttta aaaaaccgcc atagtttgga taaaagtatt 301 gtatataact gtctaaaacc agtatttgac atgggattac tgacagcttc tgaatctaca 361 tggactgaaa gtcgaaaaat aatagctcca gcatttggta tgatgccgat gaaagaatat 421 tttaacatat tcgttcaaga atctttaata cttactgaag atttagaaaa aattgcacaa 481 agtgaaaacg aaattgaatg tcttgaccat ctttgcagat gtaccttaaa aattgcatgt 541 gataccatga tgggtgtcaa gatggaaagg aatttaatag atgaatggtg gaaaataagt 601 gcaagtcaaa gacaaatttg gcaatataga tttcgaaatg tactcttggt tcctgatatt 661 atatttaatt tcacatcatg gagaggcaaa caacaagagt gtttaaattc ctttcattca 721 atcattgaaa agataataca gcaaaggaca aatgaatcaa gtacgatgtt cactaataat 781 gacacatctc atacacgatt ttatgacatt ttaatgcatt catttcgtaa cggaaaattc 841 acgcaaaagg aaattatgga caatatattt acaatgctag gagcgtcttc agacactacc 901 gccactgtgg tgcattttgt gattattatg atggcaaatt tcccagaaac acaagaaaaa 961 gcgtataaag aattattaga aatttatggc acggaaactc cgaagtttgc accagttaaa 1021 tacgaggatt tacaacatat gcattacttg gattgtatta ttaaggaaac tttaagactt 1081 ttccctattg tccctatgat tggacgaaaa ctgacagaag acttaaaaat gggagaattt 1141 gttttaccga aaggtgcaga tgttattata tcacttatgg gaatgcatcg gaatgaaaaa 1201 tattggccga atccattgat gtttaatccg gatagatttc ttcaagaaaa aacaaattgt 1261 gtaccatatt attacatacc ttttagtgac ggaccaagaa attgtatagg tttgaaatat 1321 gcaatgatgt ctatgaaagt tattttagca acgctgataa gaacgttctg taagaaattt 1381 agaagaaata ggcaacacag aagttatcag cgtcagggct gcgtggctca caatcactgg 1441 caagacggaa atctatcaat ttggaggagg cctcgaatct ctcattatta ttgctctgat 1501 gtcaacaata tgatgacaaa ttaa //