Dbfetch
LOCUS XM_012204673 2010 bp mRNA linear INV 02-APR-2015
DEFINITION PREDICTED: Atta cephalotes probable ATP-dependent RNA helicase
DDX43 (LOC105623274), mRNA.
ACCESSION XM_012204673
VERSION XM_012204673.1
DBLINK BioProject: PRJNA279976
KEYWORDS RefSeq.
SOURCE Atta cephalotes
ORGANISM Atta cephalotes
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_012130119.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Atta cephalotes Annotation Release
100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 6.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2010
/organism="Atta cephalotes"
/mol_type="mRNA"
/db_xref="taxon:12957"
/chromosome="Unknown"
/sex="male"
gene 1..2010
/gene="LOC105623274"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 5 Proteins"
/db_xref="GeneID:105623274"
CDS 1..2010
/gene="LOC105623274"
/codon_start=1
/product="probable ATP-dependent RNA helicase DDX43"
/protein_id="XP_012060063.1"
/db_xref="GeneID:105623274"
/translation="MDNNWESDNRISSRRYDRGYDRGYDHRRGNRRERESQFYRRSNR
SFGDNNDSNRQNYNNDSYRKSDEKSDITNGLVMYIDSNNIGRLIGRGGSKIKALQEDS
GARINIDKQYNENGQSAVTLTGTDNAQQRAKSLIEELLTERGGTERSGTKRSITERSN
THENESVQKTTSQPEEKEDIDWANFDWNKANEEYEECQKQKWAALPPIIKNFYKEDPA
IANMPQSVITHFRKTNNNIEIRRVFENAGSSDENVKIPNPVQTFEQAFHAFPDILKEI
RKQNFEKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLLPALIHIDGQVTPRDERS
GPNVLVMAPTRELALQIEKEVGKYSYHGIKAVCVYGGGNRKAQIDTVTKGVQIVIATP
GRLNDLVQANVLDVSAVTYLILDEADRMLDMGFEPQIRKTLLGVRPNRQTVMTSATWP
QGVRRLAQSYMKNPIQVFVGSLDLTAVHSVTQRIYMAENEDEKIDMMHQFFLEMGPQD
KVIVFFGKKSKVDDISSDLALTNIDCQSIHGDRDQSDREQALEDLKTGAVQILLATDV
ASRGIDIDITHVLNYDFPRDIEEYVHRVGRTGRAGRTGESITFMTRQDWHHAKALIDI
LEEANQEVPEEIYKMAERYDAWKKKKEQEDPYGRSNRGRRSYRRM"
ORIGIN
1 atggataaca attgggaaag tgataataga atatcatcaa ggagatatga tcgaggttat
61 gatcgaggtt atgatcatag gagaggaaat agaagggaac gagaaagtca attttataga
121 cgctctaata gatcatttgg ggataataat gactcaaata gacagaatta caataatgat
181 tcatatagaa agagtgatga aaagtcagat attacaaatg gactagttat gtacattgat
241 agcaataaca ttggaagact cattgggaga ggtggcagca aaattaaagc tctacaagaa
301 gatagtggtg ctagaattaa tatcgacaaa caatataatg aaaatggaca gagtgctgtg
361 acactaactg gtacagataa tgcgcaacaa cgagctaaga gtttaataga ggagttatta
421 actgaaaggg gtggaactga aaggagtgga actaaaagaa gtataactga aagaagtaat
481 acacacgaaa atgaatctgt gcaaaaaaca acatctcagc ctgaagaaaa ggaagacatt
541 gattgggcta attttgattg gaataaagct aatgaagaat atgaggagtg tcagaagcag
601 aaatgggcag ctttacctcc tattataaaa aatttttaca aagaagatcc agccattgct
661 aatatgccac agtcagtgat aacacatttc aggaaaacta ataataacat agaaattaga
721 cgtgtttttg agaacgcggg aagttctgat gaaaacgtga aaataccaaa tcctgtgcaa
781 acttttgaac aagctttcca tgcgtttcca gatatcctta aagaaatacg aaaacaaaat
841 tttgaaaaac caagtcctat acaatgtcag gcgtggccta ttctactgag tggtcaggat
901 ctcattggga tagcgcaaac tggaacagga aaaactcttg cctttttact gcctgctttg
961 attcatatcg atgggcaagt aactccacgt gacgaacgtt ctgggccaaa tgttcttgtt
1021 atggctccaa caagagaatt ggcattgcag attgaaaagg aagtaggaaa atactcttac
1081 catggcatta aagcagtgtg cgtatacggt ggtggaaatc gcaaagcaca aatagacact
1141 gtgacaaaag gtgtgcaaat tgtaattgca actcccggaa gattaaatga tttggttcaa
1201 gcaaatgtat tggatgtgtc ggctgtgacg tatcttatac ttgatgaagc agatcgtatg
1261 ttggatatgg gtttcgaacc tcaaattcgt aagactcttc taggagtacg accaaataga
1321 caaactgtta tgacaagcgc tacatggccc caaggtgtaa gacgcttagc tcagtcatac
1381 atgaaaaatc cgattcaagt atttgttgga tcacttgact taacagctgt tcattctgta
1441 acacagagga tttacatggc tgagaatgaa gatgagaaaa tagatatgat gcatcagttc
1501 ttcctagaaa tgggtcctca agataaggtc atagtatttt tcggtaagaa atcaaaagtg
1561 gacgatatct ctagtgatct ggctttaacg aatatcgatt gtcagagtat tcacggtgat
1621 agagatcaat cagatagaga acaagcatta gaagatctga agactggagc tgttcagatc
1681 cttctcgcga ccgacgtagc tagtcgagga atcgatattg atattacaca cgtactgaat
1741 tatgacttcc cacgggatat agaggaatac gttcaccgag tcggtcgtac tggacgcgca
1801 ggtcgaacag gtgaaagtat tacttttatg acaagacaag attggcacca tgctaaagca
1861 ctcattgata ttcttgaaga ggctaatcag gaagtacctg aggaaatata taaaatggct
1921 gaaagatatg atgcatggaa aaagaaaaaa gaacaagaag atccatacgg aagaagcaac
1981 agaggtagac gcagctatcg taggatgtga
//