Dbfetch
LOCUS XM_012203209 1014 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes protein spaetzle-like (LOC105621754), mRNA. ACCESSION XM_012203209 VERSION XM_012203209.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; corrected model. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130101.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-54 ADTU01020228.1 6005-6058 c 55-192 ADTU01020228.1 2965-3102 c 193-324 ADTU01020228.1 2258-2389 c 325-326 "NN" 1-2 327-343 ADTU01020228.1 2241-2257 c 344-609 ADTU01020228.1 857-1122 c 610-681 ADTU01020227.1 7912-7983 c 682-785 ADTU01020227.1 7655-7758 c 786-1014 ADTU01020227.1 6842-7070 c FEATURES Location/Qualifiers source 1..1014 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..1014 /gene="LOC105621754" /note="The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:105621754" CDS 1..1014 /gene="LOC105621754" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: protein spaetzle-like" /protein_id="XP_012058599.1" /db_xref="GeneID:105621754" /translation="MTSRTLRLKWTVYLALILVCQTVRLIEGYPRSSSEVSEESPDAG SSSSQDTSISRAIEEAYEQQVFLRPQEWPQKTIDEDNNCCSQRIEQMQRDTSKEKFSS DRIQRSXKKSLQDSNTDMSMYRSSDISHRNTGTSMHRNSDEKIIFPDGRILTSETPML PTLSCRKNTFCENVADYPRQLVNAAIQRNVSLRFLESVDTVDSMPDVDDVEQRIDTMS RESVLCPIREQVVYPQTAQNKENQWLFIVNQDDLKQGIRIEVCLNEGQKCNMVEGFAE GYKTSCKQKYIYRELAAVGSDGNIFKDQFRFPSSCCCHVKFTGDPTARLGLRLNLPVN QTQ" ORIGIN 1 atgacatcga gaactcttcg tctgaagtgg accgtctatc tggcactcat tttggtgtgc 61 cagacggtgc gactgatcga aggatatcct cgctcttctt cagaggtgtc ggaggaatca 121 ccggacgccg gaagttcctc gtcgcaggac acgtcgattt caagagcgat cgaagaggcg 181 tacgagcagc aggtgtttct gcgaccgcaa gaatggccgc agaagaccat tgatgaagac 241 aacaattgtt gttcacaaag gatagaacag atgcagagag acacttcgaa agagaagttt 301 tcgagcgata ggattcaaag atcannaaaa aaatcactgc aagattcaaa cactgatatg 361 tcgatgtaca ggagttcaga tatatcgcac aggaacacgg gcacgtcaat gcacaggaat 421 tctgacgaga aaattatttt tccggacggt aggatcttaa cgtcggaaac accaatgctg 481 ccgacgttga gctgtcgcaa aaatacgttc tgcgaaaacg tcgccgacta tcccaggcaa 541 ctggtgaacg cagcgataca gcggaacgtt agtttgagat tcctggagag tgtcgatact 601 gtcgattcga tgcccgacgt cgacgacgtc gaacagagga tagacacgat gtcgcgcgaa 661 tcagtgcttt gcccaattcg tgaacaagta gtatatccgc aaaccgctca gaacaaggaa 721 aatcaatggt tgttcatcgt aaatcaagat gatttgaaac aaggaatacg cattgaagtt 781 tgtttgaatg aaggccagaa gtgcaacatg gtcgaaggtt tcgccgaggg ctacaagacc 841 tcctgcaaac agaaatacat ctatcgagaa ttggcagcgg tgggaagtga cggtaacatc 901 ttcaaggatc aattccgctt tccatcgagc tgctgttgtc acgtgaaatt taccggcgat 961 cccacagcta gactgggact gagactaaat ctgccagtca atcaaacaca ataa //