Dbfetch
LOCUS XM_012201505 5301 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes uncharacterized LOC105619995 (LOC105619995), partial mRNA. ACCESSION XM_012201505 VERSION XM_012201505.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; includes ab initio. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130087.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 26% of CDS bases ##RefSeq-Attributes-END## COMPLETENESS: incomplete on the 3' end. FEATURES Location/Qualifiers source 1..5301 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..>5301 /gene="LOC105619995" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:105619995" CDS 1..>5301 /gene="LOC105619995" /codon_start=1 /product="uncharacterized protein LOC105619995" /protein_id="XP_012056895.1" /db_xref="GeneID:105619995" /translation="MENHSSIGEGDIGQIKGKISLRNNIGKRWHRFQVLTPCSFILRG SRAMSDRRFKYKSRGRQAAPCAIVAIVYGRLFEPKEWTSHHIDQVLEYGDKLFRISLR RNKLKDDEYMRTNLVHNEFYIGFYKIWVDIEKNGIRGNLFSQSIGCSDFAEGLQKFLR NNDSGVITAQGNSVAVWRQSGNAGFFCYNPASCDETGLHYADGTACLMRFKYINDLHD HLLKNLNWRYDSRYCIDKVTLLRAIEVDAFVDRFDVIGPPIVRKSVLRSINPIDIDDH KVDCTKPVQKEKVHKLARIRKEPLSIKISNYSIDRYFATELLVNRNNFDTGYSYDDMR VNVPSTFTELPDKIAILHGLTHEDEEIYKGKGGQNVANCVMAIAMKKMHPVKTWVKST LDEILMMGDLLYAKVKSDKPIIKTMTAADLDNTKFQIEDRKLVIDVDLITVTGTITSK IPSVLNLKQALEEFFLLNEEGVIETTSMAVTVWSQDDYYYLFDPRYCDATGIRIREEK TDKVTEKDRKEEIIQKDKKEIGNCCVIRFPDLDSLTALFLKNVDPTRKNDRFTIRHVT IVDDVPGTRAWNEFQPGMAGKTWVLQGEISNMDELFEEENQGVQGLAMPVVALVSAGE TPAAKWSKETVDEVIKEGDAYYNWSKPATMEEEIEKLLLVRDLKKNLYFKNRKIIIDI NEAAVVGDLSASDDSKLLNLERGLNQFFEDKYYGIVETKRLSVAVWKDEEEMKDEDKK EIFYYYFDPNPRDKLGQSAERDEENSACLVRSSDLSALADLIKKNAGHNEGENDFMIH ELKSVSIGPLMTDEEIEADKLIPIMPNLNNYSNLGETGAILLGTINQRNELVFKRITR DKQQAANGLTTLAMTKLYDPHLWYSELVDDILKIGDKLTNENLINLPEVEAEEETPRD YLLPTEIAENFTIGVNRISVGFEEESITGSMTDVIRLLEQFFEGNSMGIFRQDDVIMP IWREGEVFFTMDPRGRNAQGKPTDKNEAAAVMWFTDIPSLADVLRTVVREADDFVIDA ISIDNVYETRVAQAERVKKTTSGEDLWHHFPKLADGVWSIDGNVTMTDERFDKTNHGK QSAAIAAMAIVFSKVYQPRQWTSSILDQVIVTGDKLHSKCVERLGNGSVPLVNEIISE FFLSSRRIALTIKDCVQAGSLTGIAPKIQNLRSGIDNFFNKYEAGVLTVRGNKNLAIW KADDAYYVLIPNWSATMKENVSTVPQVIRFKDTSLLVDYLLHHLGTEGDYQITAIDVL DWTKPPLWKLDPSPAIRPTNLPPLNAYRKLRGEARAILRGSYHQGDKIFPETLRNRQT AANCVVALGMSIVKSPITWTKKTMDEILAIGSNVHQESRKIKPESRLKPKDIIRVFYV GVNVLTADIEPNTVIGLVAIEPSVSEDKKGEEKEKIDKREKRTTRREQSSSILLEEGL RKFFEDNRAGILITDRDMIAIWKDLGVYFMYDPRARNDQGLPDSNGTSCIMWFACLEP LYDTIFANIDPRERYGAFEICRVIIRNVIIETLPCPGGFQPYLDRIAPLVSIICPKKT VRLNVESLNEYSIVDDELSVLHGSLHMNHRTFSLRNRGLQSTAIAAVAVVMGLLHVPS TWTSELIDTVLKYGDSLYFESARAARPGARNLSPSELLTVFIVGDLRVTIHVHNHTTA GILHIFDLSEALAMFFRVNCAGILHTNNLAMAVMQHYGKFYMFDPCSRNDRGKPAYDG AACMFKCNSIARMAKIFVDNCNSKRSNVYTLNAVNVLSLHF" ORIGIN 1 atggagaatc atagtagtat cggcgagggt gatataggac aaatcaaagg aaaaatttca 61 cttcgtaata atattggaaa acgatggcat cgctttcaag ttctaacacc atgttcattt 121 attcttcgag gttctcgtgc gatgagtgat cgccggttca agtataaaag tcgaggacga 181 caagcagcac cgtgcgcgat agtggctatc gtttacggtc gcctgtttga acccaaagag 241 tggacgagtc atcatataga tcaagtactc gaatatggtg acaagttgtt tcgcataagc 301 ttgaggagaa acaagttgaa agatgatgaa tatatgagga ccaatctcgt acacaatgaa 361 ttctatattg gtttctacaa aatttgggtt gatatcgaaa aaaatggtat ccgtggcaat 421 ctctttagcc agtcaattgg ctgttcggat tttgctgaag gcctccaaaa atttctcaga 481 aataatgatt ctggagtaat cactgctcaa ggtaattccg ttgctgtatg gcgtcagtct 541 ggaaatgccg gtttcttttg ctacaatcca gcctcatgcg atgagactgg tctacattat 601 gctgatggca cagcttgcct catgaggttc aagtatataa atgacttgca tgatcatttg 661 ttaaagaacc taaattggcg ttatgactct cgatattgta tcgacaaagt caccttgttg 721 cgtgccatag aggtcgatgc attcgttgac cgatttgatg ttattggtcc acctatagtt 781 cggaagagcg tattacgatc cattaatcct attgacatcg atgatcataa agtggactgc 841 acaaagcctg tgcagaaaga aaaagtgcac aaacttgcaa gaatacgaaa agaaccgtta 901 tcaatcaaaa tttcaaatta tagcatcgat cgatattttg ctacagagtt gttggtgaat 961 cgaaacaact ttgacacagg atattcatac gatgacatgc gagtaaacgt gccatccacg 1021 ttcacggaat tacccgataa aatagcgatt cttcatggtc taacccatga agacgaggaa 1081 atatacaaag gcaaaggtgg acaaaacgta gcaaattgcg tgatggctat tgctatgaag 1141 aaaatgcatc cagtaaagac atgggtgaaa tcgacgctgg atgaaatcct gatgatgggt 1201 gatttattgt atgctaaagt taaatccgac aagccaataa taaagacaat gacagcggcc 1261 gatttagata ataccaaatt ccaaatagaa gatcgtaaac tagtgataga tgttgatctg 1321 atcaccgtga ccggtacaat tacctcgaag ataccgtcag ttttgaattt gaaacaggca 1381 ctagaagagt tttttctgtt aaacgaggaa ggtgtgatcg aaacgacttc aatggcggtg 1441 acagtctgga gtcaggatga ttattactat ctattcgatc ctcgatattg tgatgccact 1501 ggcattagga taagagaaga gaaaactgac aaagttacag aaaaggatag aaaagaggaa 1561 attatacaga aggataagaa agaaatagga aattgttgcg tgattcgatt tccagactta 1621 gattccttga ctgcactgtt cttgaaaaat gttgatccta cgagaaagaa cgatcggttc 1681 actattcggc atgtcacgat cgtggacgat gtgcctggca ctcgagcttg gaacgagttt 1741 cagcccggta tggcaggtaa gacgtgggtg ttgcaaggtg aaatatccaa catggatgag 1801 ttatttgaag aagaaaatca aggagttcaa ggtctcgcta tgccagttgt ggccttggtt 1861 agcgcagggg aaacgccagc agcaaaatgg agtaaggaaa ccgtcgatga agtgatcaag 1921 gaaggcgacg cttattacaa ctggtctaag cctgccacaa tggaagaaga aattgaaaaa 1981 ttgcttcttg tccgagatct gaaaaaaaat ttgtatttca aaaatcgaaa aataattatt 2041 gatatcaacg aggcggcagt tgtcggtgat ctatcagcat cggatgattc taaattacta 2101 aacttagaaa gaggcttaaa tcaattcttc gaggacaaat attatggaat agttgagacg 2161 aagagactct cagtggcagt atggaaagac gaagaagaga tgaaggacga ggataaaaaa 2221 gagatatttt attattattt cgatccaaat cctcgtgata aattaggtca atcagcggag 2281 agagacgaag aaaattctgc ctgcttggta cgatcttcgg acctctcagc gttagcagat 2341 ctcattaaaa agaatgcggg gcacaatgaa ggcgagaacg atttcatgat acacgaatta 2401 aagtctgtat ctatcggtcc acttatgacg gatgaggaga ttgaggcaga taaactaata 2461 ccgattatgc cgaatttgaa caactattcg aatttgggcg agactggcgc tatacttttg 2521 ggtaccatca atcaaagaaa tgaattggtc ttcaaacgaa taacgagaga taaacagcaa 2581 gctgctaatg gtttaacgac tttggctatg acaaaacttt acgatcctca tttatggtac 2641 agtgaacttg tagacgatat cttgaaaatt ggcgataaac tcactaatga gaacttaata 2701 aatctacctg aagtagaggc tgaagaggaa actcccagag attatcttct tcctacggaa 2761 atcgcagaaa actttaccat aggagtcaat cgaatatcag ttggatttga agaagaatct 2821 atcaccggaa gcatgactga tgtgataaga ttactcgaac agttttttga gggaaactcg 2881 atgggaatat ttcgtcagga tgacgtaata atgccgattt ggagagaagg cgaagtgttc 2941 ttcacaatgg atcctagggg tagaaacgct caaggcaaac ctacagataa gaatgaagct 3001 gcagcagtga tgtggttcac cgatatcccc tcattagctg acgttcttcg aacagttgta 3061 cgggaggccg acgacttcgt catcgatgcc atctcaatcg acaatgtgta cgagacgcga 3121 gtggcccaag ccgaacgtgt gaaaaagact acttccggtg aagatctgtg gcatcatttt 3181 cccaaactcg cagacggtgt ctggagcatc gacggtaacg tcactatgac agacgaaagg 3241 ttcgacaaga caaatcatgg caaacaaagt gcagccatcg ccgcgatggc tatcgtcttt 3301 tccaaggtct accaaccgag acagtggaca tcgtcaattc tcgatcaagt tatcgttact 3361 ggcgacaaac tacattcaaa gtgtgtcgag agactcggta atggctcggt acccttagtg 3421 aacgaaatca tcagtgaatt tttcctgtct tctcggcgca tcgctttaac aatcaaggat 3481 tgtgttcaag cgggtagtct taccgggata gctcctaaga ttcaaaattt acgaagcgga 3541 atcgacaatt tcttcaacaa gtacgaagct ggcgtattga ccgtacgagg aaataaaaat 3601 ttagccatat ggaaggccga tgacgcatat tatgttctaa tacccaattg gtccgctact 3661 atgaaagaaa acgtgtcaac ggtaccgcaa gtaatcaggt tcaaggatac gagtctcctt 3721 gtagattatc ttctacatca cttgggaacc gaaggcgatt atcaaattac tgcgatcgac 3781 gtgctggact ggactaaacc gccactttgg aaacttgatc ctagtccggc gattcgacca 3841 acgaacctgc ctcctttgaa cgcttacaga aaattacggg gcgaggcgcg tgctatcttg 3901 cgtggaagct atcatcaagg cgacaagatc tttcccgaga cgttacgtaa tcgacaaaca 3961 gcggcaaatt gtgtcgttgc gctcggtatg tcaatcgtta agagtcccat cacctggacg 4021 aaaaagacta tggacgagat tttggcaatc ggtagtaacg ttcatcaaga atcaagaaag 4081 atcaaacccg aatcgagatt gaaaccaaag gatattatca gagtattcta tgtgggtgtc 4141 aatgttttga ctgctgacat cgagcctaat accgtaatcg gtctggtggc gattgaacct 4201 tccgtctcgg aagataaaaa gggggaagag aaagaaaaga ttgataaacg cgagaagaga 4261 acaactcggc gagaacaatc ttcttcgatt ttattggagg aaggtttgcg gaaatttttt 4321 gaagataatc gtgctggtat tctaataacc gatcgcgata tgatagctat ttggaaagat 4381 ctgggtgttt acttcatgta tgatcctaga gctagaaacg atcagggtct accagattcc 4441 aacggaactt cgtgtataat gtggtttgct tgtctggaac ctttatatga tacaatcttt 4501 gcaaacattg atccccgtga gagatatggg gctttcgaga tctgtcgggt aatcataagg 4561 aacgtcataa ttgagacatt gccgtgtcca ggtggtttcc aaccatattt agatcgtatc 4621 gcaccactcg tttcaattat ctgcccaaaa aagacagtta ggttgaacgt ggaatcgctg 4681 aatgagtaca gtatcgtgga cgacgaactg agtgttctgc atggcagcct gcacatgaat 4741 catcgtacct tcagtctgag aaacaggggt ttgcagagta cggcaatcgc ggcagtcgcc 4801 gttgtaatgg ggctgctgca cgtgccatcc acgtggactt ccgagctaat tgatactgta 4861 ctcaagtacg gtgattcgct gtactttgag agtgcccgag ccgctcgacc gggcgccagg 4921 aatctctcac ccagtgagtt gctcaccgtg tttatcgtgg gtgacttgag ggtcaccatt 4981 cacgttcata atcatactac cgccgggata cttcatatct tcgatctgtc cgaggcgctc 5041 gccatgtttt tccgcgtgaa ttgcgccgga atattgcaca caaacaatct ggcgatggct 5101 gtgatgcagc attacggtaa attctatatg tttgacccgt gctcgagaaa tgatcggggt 5161 aaacctgcct acgacggcgc cgcatgtatg ttcaagtgta acagtatcgc aaggatggca 5221 aagatattcg tggacaattg caactcgaag cgatcgaatg tatatactct aaacgcggtt 5281 aacgtattga gcctgcattt t //