Dbfetch
LOCUS XM_012199929 1650 bp mRNA linear INV 02-APR-2015
DEFINITION PREDICTED: Atta cephalotes potassium/sodium
hyperpolarization-activated cyclic nucleotide-gated channel 1-like
(LOC105618386), mRNA.
ACCESSION XM_012199929
VERSION XM_012199929.1
DBLINK BioProject: PRJNA279976
KEYWORDS RefSeq; includes ab initio.
SOURCE Atta cephalotes
ORGANISM Atta cephalotes
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_012130080.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Atta cephalotes Annotation Release
100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 6.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 11% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..1650
/organism="Atta cephalotes"
/mol_type="mRNA"
/db_xref="taxon:12957"
/chromosome="Unknown"
/sex="male"
gene 1..1650
/gene="LOC105618386"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins"
/db_xref="GeneID:105618386"
CDS 1..1650
/gene="LOC105618386"
/codon_start=1
/product="potassium/sodium hyperpolarization-activated
cyclic nucleotide-gated channel 1-like"
/protein_id="XP_012055319.1"
/db_xref="GeneID:105618386"
/translation="MTEHKCELSLKKENKFKPLTFKNIWTTWCGISKYTPKCIFYMDS
TATINAEKIRHTGSKYWWIIHPFSYARLMWDTLMVAIYFIAFFTIPFMICFVTMDYEV
IGLDIVNIPIYAICWIDIMLNCITGYYDKKTRSIELKPIKILIFYLKGFLMLDILSSF
PYDHMTLRWRRLPGNKPDYIVILINIMPVMKLTRYHTFNSNIYYLFTHFEIKIFFFEL
CTILLLGLYFIFWCSCLCYLIPILIMYFANIPPEEYKTYWMMKMKDITLNLRFKNAVF
VVLENILSSGYGIFIPETDARIIFNCILMIVGRIIVCYLLIMFLHFKAEKKSSQSKFQ
ELIDQVKAYTRHKQLLPHMKKRLLAYYHYRFKDTYFHSKQILSDLTEPLREEIALQSC
RRLIENVAIFKNLPRDVLQLIVKHLKFELYLPNDIIIKAGSQGDCMYFLSSGTVAILT
PTGKEMCHLNDGAHFGEIALLMADQRRIASVVAIEVCELYRLDRKDFRHCINVHSELF
AEIERISTERIEKTVRAEEQHKRFMMRPSRTPNLRNESKEI"
ORIGIN
1 atgaccgagc ataaatgtga attgtcctta aaaaaagaaa acaagtttaa accattgact
61 ttcaaaaata tatggactac atggtgtggt atcagcaaat acactccaaa atgcattttt
121 tatatggata gcacggctac aataaatgct gaaaaaataa ggcacactgg atctaaatat
181 tggtggataa tacatccatt cagctatgct agattaatgt gggatacctt aatggtggca
241 atatatttta tcgctttctt tacaattcca tttatgattt gcttcgttac aatggattat
301 gaagtaattg gtctggatat agtgaatatt ccaatttatg cgatctgctg gatagatata
361 atgctcaatt gtattacggg atattacgac aagaagacca ggtctattga attgaaacct
421 attaagatac ttatattcta tcttaaagga tttcttatgc tagatatact atcgtctttt
481 ccatatgatc atatgacact gcgatggcga agattgccgg gaaataaacc tgattatatc
541 gttattttaa ttaatatcat gcctgtcatg aagttgacac gctatcatac tttcaattca
601 aacatttatt atctatttac gcattttgaa ataaaaatct ttttttttga attgtgtact
661 atcttattgc taggattgta cttcatcttt tggtgttctt gtttgtgtta cttaataccg
721 attttaatta tgtactttgc caacattcca ccggaagaat ataagactta ttggatgatg
781 aaaatgaaag acatcactct caacttaaga ttcaagaatg ctgtatttgt tgtattggaa
841 aatatattat caagtggtta tggtatattc ataccagaga cagatgcccg tatcattttc
901 aattgcattc ttatgattgt cggcagaatt attgtatgct atttattgat tatgttcctt
961 catttcaaag ctgaaaaaaa atcatcccaa tcaaaatttc aagaattaat agatcaagtc
1021 aaagcataca caagacataa acaattatta ccacatatga agaaacgtct tttagcttat
1081 tatcattatc ggttcaaaga tacctatttt cacagtaaac agattttatc agatttgaca
1141 gaaccattac gagaagagat tgcgcttcag tcttgtcgac gattaattga aaacgtggca
1201 atttttaaga atttaccaag agatgttctg caattaatag tgaagcactt aaaatttgag
1261 ttatatttgc caaatgacat aatcattaaa gctggtagtc aaggtgattg tatgtacttt
1321 ttatcctcgg gaactgttgc gattttgacg ccaactggaa aggaaatgtg tcatttgaat
1381 gacggtgccc atttcggcga aatcgcactc ttaatggcgg atcagcgaag aatagctagt
1441 gttgtcgcaa tcgaagtctg tgagttgtat cgattagatc gtaaagactt tcgtcattgc
1501 ataaacgtac acagcgagct attcgcggag atcgaacgca tctctacgga acgtatagaa
1561 aaaactgtca gagctgagga acaacacaag cgttttatga tgcgtcctag tcgcacgccg
1621 aatttacgca atgaatcaaa ggaaatttga
//
Unexpected Error when closing connection to refseq from NCBI E-utilities. Non-zero exit status returned (255). STDERR: "http status: 429 Too Many Requests at /nfs/public/rw/es/projects/jdbfetch/util/ncbi_refseq_fetch.pl line 124."