Dbfetch
LOCUS XM_012198604 1668 bp mRNA linear INV 02-APR-2015
DEFINITION PREDICTED: Atta cephalotes probable tyrosyl-DNA phosphodiesterase
(LOC105617023), mRNA.
ACCESSION XM_012198604
VERSION XM_012198604.1
DBLINK BioProject: PRJNA279976
KEYWORDS RefSeq.
SOURCE Atta cephalotes
ORGANISM Atta cephalotes
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_012130075.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Atta cephalotes Annotation Release
100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 6.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1668
/organism="Atta cephalotes"
/mol_type="mRNA"
/db_xref="taxon:12957"
/chromosome="Unknown"
/sex="male"
gene 1..1668
/gene="LOC105617023"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 11 Proteins"
/db_xref="GeneID:105617023"
CDS 1..1668
/gene="LOC105617023"
/codon_start=1
/product="probable tyrosyl-DNA phosphodiesterase"
/protein_id="XP_012053994.1"
/db_xref="GeneID:105617023"
/translation="MDEGALSTVLTGKEHENLERDKTKKKNREAPEDSTFDTEKTRQM
STESNDFTNNSQQNIDDSQSSFKNNQKDSNLITPRMEYLIHTYQVFDSKKVRKKARRM
AIQLMEQIGYTVMVVTPGKFAIKYASSAPYHLFFTRVENSKETYNQQFSIIFSEILDR
SFGEIVNSLHLTFMVDVIWLYLQYLLAGQCIDMTILYKHKIRDHEALSENITIIKVDR
QHEFSSHHTNIMILQYKNGIRVIVSTAGLYSVDWENRTQGLWISPHLPYLPESAHPSD
GESPTGFKKDLERYLDKYDQPVLTQWISAVRRVDFSDVNVFLVASVPGIHKGYEANFW
GYKKLAYILSRYVTLPPDAQWPIVALSSGVGSFGSTVENWLLKDIIRCMSKETSIGLK
NHPQFQFIYPSIENYKQSFDCQTLITPLTYSAELHSKQQWLEQYLYQWKAKRTGRDRA
IPCIKSYTRISPDSKRIPWFLLTSANLSKVAWGSTKQYEGYSIGNYEAGVAFIPKLIT
GTATFPIGEEEDTAVPIFPIPYDLPLSRYDSVDSPFVNEFVDSLNEM"
ORIGIN
1 atggacgaag gagctctttc tacagttttg accggcaaag aacatgagaa tttggaacgc
61 gacaagacaa aaaagaaaaa tcgggaggca ccagaagata gcactttcga tacagaaaaa
121 acgagacaga tgagcacaga aagcaatgat ttcacaaaca atagtcagca aaatatcgac
181 gattctcaaa gcagtttcaa aaataatcaa aaagattcaa atttaataac acctagaatg
241 gaatatctca tccatactta tcaagttttt gattccaaaa aagtaaggaa gaaagctaga
301 agaatggcta ttcagctaat ggaacaaatt gggtatacag taatggttgt gacaccagga
361 aagtttgcga taaaatatgc ttcttcagcg ccttaccatt tatttttcac gagagtcgaa
421 aattccaaag agacttataa tcaacaattc tccataattt tctctgaaat tctcgatcgt
481 agttttggag aaattgttaa cagtcttcat ttaactttta tggtagatgt catatggttg
541 tatttacagt atttgttggc tggccaatgt attgacatga caattctgta caaacataaa
601 atacgtgatc atgaagcatt aagtgaaaat attactataa taaaggtaga cagacaacac
661 gagttctcaa gtcatcatac gaacatcatg attctacaat ataaaaatgg gattagggtg
721 attgtctcta ctgctggctt atattccgtt gattgggaaa acaggacaca aggattgtgg
781 atttcacctc atctgcctta cttgccagaa tctgcacatc ctagtgatgg agaatctcca
841 acaggtttta aaaaagatct cgagcgatat ctggataaat atgaccaacc ggttttgacg
901 cagtggataa gtgcagtacg gagagtagat ttttcagatg taaacgtatt tctcgtcgct
961 tctgttcctg gaattcacaa aggttacgaa gccaattttt ggggatacaa gaaattggca
1021 tatattctat cacgctatgt cacactgcca ccagatgcac agtggcctat agtagcacta
1081 agttctggtg taggtagctt tggttcaacc gtcgaaaatt ggttgttgaa agacataatt
1141 cggtgtatgt cgaaggagac ttctataggt ttaaagaatc atccacagtt tcagtttatt
1201 tatccgtcaa tagagaatta taagcaaagc tttgattgtc aaactttaat tactcctttg
1261 acatacagtg cagaattaca ttctaagcag cagtggctag aacaatattt atatcaatgg
1321 aaagctaagc gaacaggacg agatcgtgcg atcccttgta ttaaatctta cacaagaatt
1381 tctcccgatt cgaaaagaat tccctggttt ttgctcacca gcgcaaatct gagcaaagtc
1441 gcatggggat caaccaaaca atacgaaggt tatagtatag gaaactatga ggccggcgtc
1501 gcattcatac caaaactaat cactggaaca gcgacatttc ctattgggga agaagaagat
1561 acagctgttc caatatttcc gattccatac gatcttccat taagccgata tgattcggtc
1621 gatagtcctt ttgtcaacga atttgtcgat tctctaaacg aaatgtaa
//