Dbfetch
LOCUS XM_002107102 2432 bp mRNA linear INV 03-NOV-2021 DEFINITION PREDICTED: Drosophila simulans septin-2 (LOC6726162), transcript variant X4, mRNA. ACCESSION XM_002107102 VERSION XM_002107102.4 DBLINK BioProject: PRJNA695671 KEYWORDS RefSeq. SOURCE Drosophila simulans ORGANISM Drosophila simulans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_052525.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 3, 2021 this sequence version replaced XM_002107102.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila simulans Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2432 /organism="Drosophila simulans" /mol_type="mRNA" /strain="w501" /db_xref="taxon:7240" /chromosome="X" /sex="female" /tissue_type="whole body" /dev_stage="adult" /collection_date="2016-12" /collected_by="Erika Gajda" gene 1..2432 /gene="LOC6726162" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns" /db_xref="GeneID:6726162" CDS 357..1484 /gene="LOC6726162" /codon_start=1 /product="septin-2 isoform X2" /protein_id="XP_002107138.1" /db_xref="GeneID:6726162" /translation="MSKTPSFDKDRDYIGFATLPEQVHRKSVKRGFEFTLMVVGESGL GKSTLINSLFLGDLYKNRQMPNVEERIEKTTKVEKKTMDIEERGVRLRLTVVDTPGFG DAINCEDSWRVCTQYIDEQFRQYFTDESGLNRRNIQDNRVHCCLYFVPPWGHSLRQMD LDLIRRLHRKVNIVLVIGKADCLNKQEVRKLKERILQDLEDNHIQLYQFPECDSDEDD DFKQQDRELKASIPFAVVGSNTILEVAGKKVRGRQYPWGVVNVEDPEHSDFIKLRTFL ISTHMQDLKDTTQDVHYENFRAQCISQISQHALRERGKLKRDSISSTNGFDAAISETD RLLLQKDEEIRRMQDMLTQMQEKLKQTHLMEMKKNDSVIDV" polyA_site 2432 /gene="LOC6726162" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttagggcagt tcgctcgcca gttgcagctc caccacaata caataaagtg ttcatcaaac 61 tcggggattt attttttcaa cgaccaaaca acaaacaact actgactctc actacgatcg 121 aatatcaaac caaaaataat aaacaaatcc aaatatgtgg caaatttgct gataagcagg 181 aacataaagt gaaaacccgg aaggcagaaa aagtggcgaa ggcttttggg ccaattacgt 241 tttaagtagg cgttccgtat acacacgaaa gtcggcggga aagggcggca cgggcggcag 301 gaggcggagg gagttacgag gaccaaagga ccaggacaca caccagcagc aggaacatgt 361 ctaaaacgcc ctcgttcgac aaagatcgtg attacatagg ctttgccacg cttccagagc 421 aagtgcaccg gaagtcggtg aagcggggct tcgagttcac cctcatggtg gtcggcgagt 481 ccggactggg caagtccacg ctgatcaaca gcctcttcct gggcgatctc tacaagaatc 541 ggcagatgcc caatgtggag gagcgcatcg agaagacgac aaaggtggag aagaagacga 601 tggacatcga ggagcggggc gtgcggctcc ggctgacggt ggtggacacc ccgggattcg 661 gggatgccat caactgcgag gacagctggc gcgtctgcac ccagtacatc gacgagcagt 721 tccgccagta cttcaccgac gagagcggcc tgaatcgccg caacatccag gacaatcggg 781 tgcactgctg cctctacttt gtgccgccat ggggccacag cctgcgacag atggacctcg 841 acttgatccg gcggctgcac cgcaaggtga acatcgtgct ggtgatcggt aaggccgact 901 gccttaacaa gcaagaggtg cgcaagctga aggagcgcat cctgcaggac ctggaggaca 961 accacatcca gctgtatcag ttccccgagt gcgactccga cgaggacgac gacttcaagc 1021 agcaggaccg cgagctaaag gcctccattc cgttcgccgt cgtcggcagc aacaccattc 1081 tggaggtggc cggcaagaag gtccgggggc gccagtatcc gtggggcgtg gtgaacgtgg 1141 aggatccgga gcacagtgac ttcatcaagc tgcgcacctt cttgatatcc acgcacatgc 1201 aggacctcaa ggacaccacg caggacgtgc actacgagaa cttccgggcg cagtgcatct 1261 cgcagatttc gcagcacgcg ctgcgtgagc gcggcaagtt gaagcgggac tcgattagct 1321 cgaccaacgg attcgacgcg gccatctcgg agacggacag gctgctcctg cagaaggacg 1381 aggagatacg gaggatgcag gacatgctca cccagatgca ggagaagctc aagcagaccc 1441 atctcatgga gatgaagaag aatgacagcg tgatcgacgt ctagggaacg gaaatgggaa 1501 cgtgttcaat tttgcaccgc catatatgca tctacctact atataggact tatatggtga 1561 cccagagaaa tcctggagca gctgcaacca aatcgacttt gtttataagc tagcacagac 1621 tttttaaaaa caaaaacaac caattaaatc caaacaaaaa gaaaaatgat taagacaacg 1681 attcccccaa aagcacaaag aatccgacga accaaaaact tcagacatca cacagccttt 1741 ttcaattttg tagctaaagt aacgatttcg ttaagaacta acgatttaat agaacacgtc 1801 tatcttgaga cattagatat tgatcaacac gattacgata ttataccaaa gtttagggag 1861 tttcaaaaac ttaacgcaag taaattgtta atggaaaaga tcaagaaacc acagaggcac 1921 atagaagtac cgataacgat aaacagaaag acatatacag atcccaaaaa tgttttaatt 1981 tattgtacga gtataatttt gatatatttg atttcctttc gttttggttt taaagaacaa 2041 aacttgagaa gaggagaaga gttataagca agtttgcttt aattatgtgt aaagaactta 2101 taccatttat attgtaagaa tatatcagat ctgatgatat aggacaaacc gctggaggtt 2161 ttggcactga atttccatga atcgactttc agcaagttcc aattatttat gctaattacg 2221 tattatcaga tatatgtatc tatgaacaaa acctattttg ttgaaacgaa ttgttaatga 2281 atttatttta aattatatcg attaagcctt cacgcaacaa ccataatatt taaatgaaat 2341 tatagtcgaa aaattatata taaacatagc gattgctaaa aatcgatttc aaataaagat 2401 aaaaacaatt taagtggtgc atttacaaac ga //