Dbfetch
LOCUS XM_002098581 3343 bp mRNA linear INV 24-AUG-2021 DEFINITION PREDICTED: Drosophila yakuba 26S proteasome non-ATPase regulatory subunit 1 (LOC6538083), mRNA. ACCESSION XM_002098581 VERSION XM_002098581.3 DBLINK BioProject: PRJNA695779 KEYWORDS RefSeq. SOURCE Drosophila yakuba ORGANISM Drosophila yakuba Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_052530.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 6, 2021 this sequence version replaced XM_002098581.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila yakuba Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3343 /organism="Drosophila yakuba" /mol_type="mRNA" /strain="Tai18E2" /isolation_source="600 pooled females from a lab stock" /db_xref="taxon:7245" /chromosome="3R" /sex="female" /tissue_type="whole fly" /country="Cote d'Ivoire" /collection_date="1983" gene 1..3343 /gene="LOC6538083" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns" /db_xref="GeneID:6538083" CDS 143..3199 /gene="LOC6538083" /codon_start=1 /product="26S proteasome non-ATPase regulatory subunit 1" /protein_id="XP_002098617.3" /db_xref="GeneID:6538083" /translation="MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIE KIEMLHEDRSFPENKLAGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETII AKCIDFYIAQRVEFIENPKEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRM DTFKDAIMKSDDVRGMLAYAYNVTMSLIQNRGFRNEVLRCLVSLYRDLGVPDYVNMCQ CLIFLEDPFAVAEMLDTLTRSSVETNNLMAYQIAFDLYESATQEFLGNVLQHLKNTAP IPTALPSTFKPQGTTSEDGAKSEGDKSKSDEDITEDKPADDKVERTIDSLNEVEKLHQ KNIEKLISILSGEVSIDLQLQFLIRSNHADLQVLRGTKEAVRVSICHTATVIANAFMH SGTTSDQFLRDNLDWLARATNWAKLTATASLGVIHRGHEKDSLALMQSYLPKEAGPSS GYSEGGALYALGLIHANHGANIIDYLLQQLKDAQNENVRHGGCLGLGLAGMGTHRQDL YEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQAIEDMVSYAQETQHEKILRGLAVG ISLTMFSRLEEADPLVTSLSTDKDPVLRRSGMYTIAMAYNGTGSNKAIRKLLHVAVSD VNDDVRRAAVTAIGFILFRTPEQCPSVVSLLAESYNPHVRYGAAMALGIACAGTGLRE AIALLEPMVKFDPVNFVRQGALIASAMILIQHTDQSCPKSTFFRQLYAEVISNKHEDV MAKYGAILAQGIIDAGGRNATLSLQSRTGHTNLQAVVGMLAFTQYWYWFPLAHTLSLA FTPTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAVLSIAARQK RRENADKKEDEKMDVDEDSKEGAAVKKDEETKTEEKPVTEEKPKKKEEKEKKKEEDKE AAGTSSEKDKEKDKDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSYEPLKDVT IGGIIVFQHTGKAEDQELVEPVAAFGPMNDEEKEPEPPEPFEYIED" polyA_site 3343 /gene="LOC6538083" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gaaaaatatc gaggaaaaat cgccattacc aacactgtct gcataccgag tgatttagca 61 tttttcggca caaaagaaaa ctgaaaattg aaacggtgca attgttgaac atacttttca 121 ctggaaacaa cgcagctgga aaatgagtct tacgtccgcc gcggggataa tttccctact 181 cgatgagccg atgccggatc ttaaggtgtt cgccctcaaa aagctggaca acatcgtcga 241 tgagttctgg ccggaaatct cggagtccat cgagaagatt gagatgctgc acgaggatcg 301 cagcttcccc gaaaacaagc tagctggcat ggtggcctcc aaggttttct atcacctcgg 361 ctccttcgag gacgctctga catacgccct gggcgctggc gatctcttcg acgtgaatgc 421 ccggaatgag tacacggaga ccatcattgc caagtgcatc gacttttaca ttgcccagcg 481 ggtggagttc atcgagaacc ccaaggaggc aagcgtcgtg gacgagcggc tggagggcat 541 tgtgaacagg atgattcagc gctgtctaga cgacaaccag tttcgccagg cgctgggcat 601 tgccttggaa acccgtcgca tggacacctt caaggacgcc atcatgaagt cggacgatgt 661 gcgtggcatg ttggcctacg cctacaacgt gaccatgtcc ctcatccaga accgcggctt 721 ccgcaacgag gtgctgcgct gcctggttag tctgtaccgg gatctgggtg tgccggacta 781 cgtgaacatg tgtcagtgcc tcatcttcct ggaggatccc ttcgctgttg ccgagatgct 841 ggacaccctc acacgctcct cggtggagac aaacaatctg atggcctatc agatcgcatt 901 tgacttgtac gagtcagcca cgcaggagtt cttgggaaat gtattgcagc atctgaaaaa 961 caccgctcct atcccaaccg ccctacccag cacatttaag ccccagggta caacctccga 1021 ggatggtgcc aagtcggagg gggacaaatc caagtctgac gaggatatca ctgaggacaa 1081 gccagctgat gataaagtag agcgcacaat cgattccctt aacgaggttg aaaagcttca 1141 tcagaagaac atcgaaaagc ttatatcgat cctctccggc gaggtgtcca tcgacctgca 1201 gcttcaattc ctcatccgaa gcaatcacgc cgacttgcag gtccttcgag gtacaaagga 1261 agcggtccgt gtatctatct gccacacagc cactgttatt gccaacgcct tcatgcacag 1321 cggcactacc tccgaccaat tcctgcgcga caacctcgac tggctggcca gggccacgaa 1381 ttgggccaag ctgacggcaa ccgcttcgct tggagtaatt catcggggtc acgagaagga 1441 ctctctcgct ctcatgcaga gctatctgcc caaggaggcc ggtccaagct ctggttactc 1501 cgagggtggc gctctgtacg ctttgggctt gatccatgcg aatcacggag ctaacattat 1561 agactatctg ctgcaacagc tgaaggatgc ccaaaacgag aatgtgcgtc atggcggctg 1621 cctgggactg ggtcttgctg gcatgggcac ccatcgccag gatttatatg agcagctgaa 1681 gtttaatctg tatcaggatg acgcggttac cggagaggcg gcaggcattg ccatgggcat 1741 ggtcatgctg ggctccaaga acgcccaggc catcgaggac atggtgtcgt atgcgcagga 1801 gacgcagcac gagaagatcc tacgcggcct agccgtgggc atctccctca caatgttctc 1861 tcgtttggag gaggccgacc ccttggtgac cagtctgtcc accgataagg atcctgtgct 1921 gcgccgctcg ggaatgtaca ccattgccat ggcttacaat ggaactggta gcaacaaggc 1981 catccgtaag ctgctgcacg tagccgtctc cgacgtgaat gatgatgtgc gccgtgctgc 2041 cgtgactgcc atcggcttca ttctgttccg cactccggag cagtgcccct ctgtggttag 2101 tctgctggcc gagtcctaca acccgcacgt tcgttacgga gccgcgatgg ctcttggtat 2161 cgcctgtgcc ggcacaggtt tgcgggaggc cattgccctg cttgagccaa tggtgaagtt 2221 cgatccggtc aactttgtgc gccagggagc tctgatcgcc tctgccatga tcctgattca 2281 gcacacggac cagagctgcc ccaagtccac cttcttccgt cagctgtacg ccgaggtcat 2341 tagcaacaag cacgaagatg tgatggcaaa gtacggtgcc attctggctc aaggtattat 2401 tgatgctggt ggccgaaatg ctactctgtc cctgcaatcg cgtacaggac acaccaacct 2461 gcaggcagtg gtgggcatgc tggctttcac ccagtactgg tactggttcc cgctggccca 2521 caccctctct cttgccttca cacccacctg tgtgatcggc ctgaactccg acctgaagat 2581 gcccaagatg gagtacaagt cggcagccaa gccctcgttg tacgcctatc ccgccccact 2641 ggaggagaag aagagcgagg agcgcgagaa ggtggccacc gcagttcttt ccattgccgc 2701 ccgccaaaag agacgcgaga atgccgacaa aaaagaggat gagaagatgg atgtggacga 2761 ggacagcaaa gagggcgctg ccgtcaagaa ggacgaggaa accaagaccg aggagaagcc 2821 ggtgacggag gagaagccca agaagaagga agagaaggaa aagaaaaagg aggaggacaa 2881 ggaagcagct ggcaccagca gcgaaaaaga taaggagaag gacaaggaca agaaggagaa 2941 gaaggagcca gagccgacct ccgaaatcct gcagaatcca gcccgcgttc tccgtcagca 3001 actgaaggtc cttagcgtca ttgatggaca atcgtatgag ccgctgaagg atgtcaccat 3061 cggtggaatt attgtattcc agcacactgg caaagcagag gaccaggagc tcgttgagcc 3121 agttgccgca tttggtccaa tgaacgacga ggagaaggag ccggagcccc cagagccctt 3181 cgagtacatc gaggactaaa tgggcatgct gtttgtcatt atctaagtaa accctgttcg 3241 attttcaacc ttgcatactt ttcacgagag aaactaatcg gcaagaacgc gaaatgctta 3301 tccctaatta taacacaata aatggtcatc atatagatgt aaa //