Dbfetch
LOCUS XM_002085106 1731 bp mRNA linear INV 03-NOV-2021
DEFINITION PREDICTED: Drosophila simulans probable glutamate--tRNA ligase,
mitochondrial (LOC6738332), mRNA.
ACCESSION XM_002085106
VERSION XM_002085106.4
DBLINK BioProject: PRJNA695671
KEYWORDS RefSeq.
SOURCE Drosophila simulans
ORGANISM Drosophila simulans
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_052522.2) annotated using gene prediction method: Gnomon,
supported by EST evidence.
Also see:
Documentation of NCBI's Annotation Process
On Nov 3, 2021 this sequence version replaced XM_002085106.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila simulans Annotation
Release 103
Annotation Version :: 103
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 9.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1731
/organism="Drosophila simulans"
/mol_type="mRNA"
/strain="w501"
/db_xref="taxon:7240"
/chromosome="3L"
/sex="female"
/tissue_type="whole body"
/dev_stage="adult"
/collection_date="2016-12"
/collected_by="Erika Gajda"
gene 1..1731
/gene="LOC6738332"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 4 ESTs, 3 Proteins, and 100%
coverage of the annotated genomic feature by RNAseq
alignments, including 76 samples with support for all
annotated introns"
/db_xref="GeneID:6738332"
CDS 97..1632
/gene="LOC6738332"
/codon_start=1
/product="probable glutamate--tRNA ligase, mitochondrial"
/protein_id="XP_002085142.1"
/db_xref="GeneID:6738332"
/translation="MLKISPRLLMQQCLRHAHSQVRVRFAPSPTGYLHLGGLRTALYN
FLYARHLGGKFLLRIEDTDQTRLVPGASERLVEDLLWAGIEIDEGPGFGGQLGPYVQS
QRTEIYSKAIEELLRNGTAYRCFCTERRLDLLRKEALRTRQVPRYDNKCRHLTTTEVD
SLLAKGTPHCIRFKLTDHEEPLDDLIYGKVHHNVSDTEGDPVVMKSDQFPTYHFANVV
DDHLMGITHVLRGVEWQISTTKHLLLYKAFGWQPPKFGHLPLLVNADGTKLSKRQGDI
GIKHFRERGYFPQALVNYVVSAGGGFEHRTNAKQQLLSMQALYEQFHIERVNSHPSRL
NPELLDDLNRMEIVQRLSGNESRTKLVNEVQQLVKEAYPQHSNLDLAEDHILDVLNWS
SKRLTLLQDLTSSKLSFLWVKPCDFQIKDLSAEQLAHLLQLINAIQDFHKDELNVKLK
SFAQKENIKFPQMMKTLRAALSGLKEGPGVAEMMEILGKSVTLERLKDALPKESLHLE
QHQ"
polyA_site 1731
/gene="LOC6738332"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
1 gttaagccaa acgcgagtta acagttctag tttcgatcag ctgtttgggg taaacaaaaa
61 accggcaaag gaattttatt tctaaaatac ataaatatgt tgaagataag tccgcgattg
121 ctgatgcagc agtgcctgcg ccacgcccac agccaggtgc gcgtccgctt tgctccaagt
181 cccacgggtt acctgcattt gggcggtctg cgcacagccc tatacaattt cctatacgcc
241 aggcatttgg gcggaaaatt cctgctgcgg atcgaggaca cggatcaaac tcgactagtg
301 cccggtgcca gtgaacggct ggtggaggat ctgctctggg caggcataga aattgacgag
361 ggacctggtt ttggcggtca actgggaccc tatgtgcaga gtcagcgaac ggaaatttac
421 agcaaagcca ttgaggaact gctccgtaat ggaaccgcat acaggtgttt ctgcaccgaa
481 cgccgtcttg atctgttgcg taaggaggcg ctgagaaccc ggcaagttcc acgctatgat
541 aacaagtgcc ggcatcttac gacgacggaa gtggattccc tactagccaa gggtacaccc
601 cactgcatac gattcaagct gacggatcac gaggaaccac tggatgatct catctacggc
661 aaggtgcatc acaatgtcag cgacaccgaa ggcgatccag tggtcatgaa gagcgaccaa
721 tttcccacct atcactttgc caacgtggtg gacgaccact tgatgggcat tacacacgtc
781 ctgaggggcg tggagtggca gatatccacc accaagcatt tgctgctcta caaagctttt
841 ggctggcagc cccctaaatt cggtcacctg ccgcttctgg tgaatgcaga tggcaccaag
901 ctaagcaaac gtcaaggaga cattggcatc aagcactttc gggaacgcgg ctactttccg
961 caggctttag tgaactatgt ggtttctgca ggcggaggtt tcgagcatcg taccaatgcc
1021 aagcagcagc tgctcagcat gcaggcgctt tatgagcagt ttcacataga gcgggtcaac
1081 tcccatccga gtcgtcttaa tcccgaactg ctcgatgatc tcaatcgcat ggagattgtg
1141 cagcgtttgt ctggcaatga aagtcgcacg aaattggtca atgaagtgca acagctggtg
1201 aaagaagcct atccgcaaca ctccaactta gatctagccg aggaccacat attggatgtg
1261 ctaaattggt catcaaagcg cttaacactg ctccaggatt tgaccagcag caaactgagt
1321 ttcctgtggg taaaaccatg cgattttcaa attaaggacc tgagcgcgga gcaactagct
1381 cacttgctgc agttaatcaa cgctatccag gactttcaca aggatgaact caacgttaag
1441 ctaaaatcct ttgctcaaaa agaaaacatt aaatttccac aaatgatgaa aacactaagg
1501 gcagctttaa gtggcctaaa agaaggtcct ggcgtagcgg aaatgatgga gatcctaggc
1561 aaatccgtca ctctcgaacg actcaaagat gctctgccca aggaaagtct gcatttagaa
1621 caacatcagt gatttggtta agttctgttg tatttgtatg tatatataat agattaattt
1681 atatattgat aacttttgca atttgagaat aagatcaatg agtagacacc a
//