Dbfetch

LOCUS       XM_002085106            1731 bp    mRNA    linear   INV 03-NOV-2021
DEFINITION  PREDICTED: Drosophila simulans probable glutamate--tRNA ligase,
            mitochondrial (LOC6738332), mRNA.
ACCESSION   XM_002085106
VERSION     XM_002085106.4
DBLINK      BioProject: PRJNA695671
KEYWORDS    RefSeq.
SOURCE      Drosophila simulans
  ORGANISM  Drosophila simulans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_052522.2) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Nov 3, 2021 this sequence version replaced XM_002085106.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Drosophila simulans Annotation
                                           Release 103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Drosophila simulans"
                     /mol_type="mRNA"
                     /strain="w501"
                     /db_xref="taxon:7240"
                     /chromosome="3L"
                     /sex="female"
                     /tissue_type="whole body"
                     /dev_stage="adult"
                     /collection_date="2016-12"
                     /collected_by="Erika Gajda"
     gene            1..1731
                     /gene="LOC6738332"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 ESTs, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 76 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:6738332"
     CDS             97..1632
                     /gene="LOC6738332"
                     /codon_start=1
                     /product="probable glutamate--tRNA ligase, mitochondrial"
                     /protein_id="XP_002085142.1"
                     /db_xref="GeneID:6738332"
                     /translation="MLKISPRLLMQQCLRHAHSQVRVRFAPSPTGYLHLGGLRTALYN
                     FLYARHLGGKFLLRIEDTDQTRLVPGASERLVEDLLWAGIEIDEGPGFGGQLGPYVQS
                     QRTEIYSKAIEELLRNGTAYRCFCTERRLDLLRKEALRTRQVPRYDNKCRHLTTTEVD
                     SLLAKGTPHCIRFKLTDHEEPLDDLIYGKVHHNVSDTEGDPVVMKSDQFPTYHFANVV
                     DDHLMGITHVLRGVEWQISTTKHLLLYKAFGWQPPKFGHLPLLVNADGTKLSKRQGDI
                     GIKHFRERGYFPQALVNYVVSAGGGFEHRTNAKQQLLSMQALYEQFHIERVNSHPSRL
                     NPELLDDLNRMEIVQRLSGNESRTKLVNEVQQLVKEAYPQHSNLDLAEDHILDVLNWS
                     SKRLTLLQDLTSSKLSFLWVKPCDFQIKDLSAEQLAHLLQLINAIQDFHKDELNVKLK
                     SFAQKENIKFPQMMKTLRAALSGLKEGPGVAEMMEILGKSVTLERLKDALPKESLHLE
                     QHQ"
     polyA_site      1731
                     /gene="LOC6738332"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttaagccaa acgcgagtta acagttctag tttcgatcag ctgtttgggg taaacaaaaa
       61 accggcaaag gaattttatt tctaaaatac ataaatatgt tgaagataag tccgcgattg
      121 ctgatgcagc agtgcctgcg ccacgcccac agccaggtgc gcgtccgctt tgctccaagt
      181 cccacgggtt acctgcattt gggcggtctg cgcacagccc tatacaattt cctatacgcc
      241 aggcatttgg gcggaaaatt cctgctgcgg atcgaggaca cggatcaaac tcgactagtg
      301 cccggtgcca gtgaacggct ggtggaggat ctgctctggg caggcataga aattgacgag
      361 ggacctggtt ttggcggtca actgggaccc tatgtgcaga gtcagcgaac ggaaatttac
      421 agcaaagcca ttgaggaact gctccgtaat ggaaccgcat acaggtgttt ctgcaccgaa
      481 cgccgtcttg atctgttgcg taaggaggcg ctgagaaccc ggcaagttcc acgctatgat
      541 aacaagtgcc ggcatcttac gacgacggaa gtggattccc tactagccaa gggtacaccc
      601 cactgcatac gattcaagct gacggatcac gaggaaccac tggatgatct catctacggc
      661 aaggtgcatc acaatgtcag cgacaccgaa ggcgatccag tggtcatgaa gagcgaccaa
      721 tttcccacct atcactttgc caacgtggtg gacgaccact tgatgggcat tacacacgtc
      781 ctgaggggcg tggagtggca gatatccacc accaagcatt tgctgctcta caaagctttt
      841 ggctggcagc cccctaaatt cggtcacctg ccgcttctgg tgaatgcaga tggcaccaag
      901 ctaagcaaac gtcaaggaga cattggcatc aagcactttc gggaacgcgg ctactttccg
      961 caggctttag tgaactatgt ggtttctgca ggcggaggtt tcgagcatcg taccaatgcc
     1021 aagcagcagc tgctcagcat gcaggcgctt tatgagcagt ttcacataga gcgggtcaac
     1081 tcccatccga gtcgtcttaa tcccgaactg ctcgatgatc tcaatcgcat ggagattgtg
     1141 cagcgtttgt ctggcaatga aagtcgcacg aaattggtca atgaagtgca acagctggtg
     1201 aaagaagcct atccgcaaca ctccaactta gatctagccg aggaccacat attggatgtg
     1261 ctaaattggt catcaaagcg cttaacactg ctccaggatt tgaccagcag caaactgagt
     1321 ttcctgtggg taaaaccatg cgattttcaa attaaggacc tgagcgcgga gcaactagct
     1381 cacttgctgc agttaatcaa cgctatccag gactttcaca aggatgaact caacgttaag
     1441 ctaaaatcct ttgctcaaaa agaaaacatt aaatttccac aaatgatgaa aacactaagg
     1501 gcagctttaa gtggcctaaa agaaggtcct ggcgtagcgg aaatgatgga gatcctaggc
     1561 aaatccgtca ctctcgaacg actcaaagat gctctgccca aggaaagtct gcatttagaa
     1621 caacatcagt gatttggtta agttctgttg tatttgtatg tatatataat agattaattt
     1681 atatattgat aacttttgca atttgagaat aagatcaatg agtagacacc a
//