Dbfetch
LOCUS XM_002078605 2441 bp mRNA linear INV 03-NOV-2021 DEFINITION PREDICTED: Drosophila simulans serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit (LOC6731492), transcript variant X3, mRNA. ACCESSION XM_002078605 VERSION XM_002078605.4 DBLINK BioProject: PRJNA695671 KEYWORDS RefSeq. SOURCE Drosophila simulans ORGANISM Drosophila simulans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_052520.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 3, 2021 this sequence version replaced XM_002078605.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila simulans Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2441 /organism="Drosophila simulans" /mol_type="mRNA" /strain="w501" /db_xref="taxon:7240" /chromosome="2L" /sex="female" /tissue_type="whole body" /dev_stage="adult" /collection_date="2016-12" /collected_by="Erika Gajda" gene 1..2441 /gene="LOC6731492" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns" /db_xref="GeneID:6731492" CDS 300..2075 /gene="LOC6731492" /codon_start=1 /product="serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit isoform X2" /protein_id="XP_002078641.2" /db_xref="GeneID:6731492" /translation="MAASDKSVDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALAL GEERTRSELIPFLTETIYDEDEVLLALADQLGNFTSLVGGPEFAMYLIPPLESLATVE ETVVRDKAVESLRTVAAEHSAQDLEIHVVPTLQRLVSGDWFTSRTSACGLFSVCYPRV TQPVKAELRANFRKLCQDETPMVRRAAANKLGEFAKVVETEYLKSDLIPNFVQLAQDD QDSVRLLAVEACVSIAQLLPQDDVEHLVLPTLRQCASDSSWRVRYMVAEKFVDLQKAV GPEITRVDLVPAFQYLLKDAEAEVRAAVATKVKDFCANLDKVNQVQIILSSILPYVRD LVSDPNPHVKSALASVIMGLSPMLGAYQTVEQLLPLFLIQLKDECPEVRLNIISNLDC VNDVIGIQQLSQSLLPAIVELAEDSKWRVRLAIIEYMPALAGQLGQEFFDQKLRGLCM GWLNDHVYAIREAATLNMKKLVEQFGAPWAEQAIIPMILVMSRNKNYLHRMTCLFCLN VLAEVCGTDITTKLLLPTVLLLAADPVANVRFNVAKTLQKISPFLEASVIDAQVKPTL DKLNTDTDVDVKHFAAQAIAGIAAA" polyA_site 2441 /gene="LOC6731492" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aatcatcgat atgcgttcca cctctaccgt tgtgtcactt gaagaaaaaa aatattaatt 61 tgcaccaacg acgtacgttt ttcgttcaaa agaatagcaa tcagcggata attgtatgga 121 ttattagaaa atttaaggcg acggaattag taccttgcga aattattttg taaccttgaa 181 aaagcaatct gggaatcgcc agagggccaa atcgaaatcg tcgtttgcct gcacaataga 241 aaacccgatt ttcagtgcgt ttgtgtttgt gtgtgagagc agaaggaaca gcggaaaaaa 301 tggcagcaag cgacaaatcg gtcgacgatt cactatatcc cattgcggtt ctaatcgatg 361 aactgaaaaa cgaggacgtt cagcttcggt tgaactccat caagaaactg tccaccattg 421 cactcgcttt gggcgaggag cgcacacggt cagagttgat tcccttcctc accgagacca 481 tatacgatga ggacgaggta ctgctggccc tggccgatca actgggcaac tttacgagtc 541 tcgttggtgg accagagttt gccatgtact tgattccgcc cctcgagagt ttggccaccg 601 tagaggaaac cgtggtgcga gacaaggctg tggaatctct gcggaccgtg gccgctgaac 661 acagcgccca ggatctggag atccatgtgg tgccgacatt gcagcgattg gtttccggtg 721 actggttcac ctcacgcacc tctgcctgcg gcctcttctc ggtttgctat ccacgcgtca 781 cgcagccagt gaaggccgag ctgcgcgcca acttccgaaa gctctgccag gatgagacac 841 ccatggtgcg ccgtgcagca gccaacaagc tgggcgagtt tgccaaggtt gttgagaccg 901 agtatctgaa gtccgatttg attcccaact ttgttcagct ggcacaggat gatcaggact 961 ctgttcgtct gctagctgta gaggcttgcg tcagcattgc ccagctgctg ccccaggatg 1021 atgtagagca cctggttctg cccacgctgc gtcagtgcgc cagcgactct tcctggaggg 1081 tgcgttacat ggtggccgag aagtttgttg atctgcaaaa ggctgtgggt ccggagatta 1141 ctcgggtgga tttggtgcct gccttccagt acttgctcaa ggacgccgag gccgaggttc 1201 gcgctgcagt ggccaccaag gtgaaggact tctgcgccaa cctggacaag gtgaaccagg 1261 tgcaaatcat ccttagttcc attttgccct atgtgcgcga tcttgtatcg gaccccaacc 1321 ctcatgtcaa gtcagctctg gcctcagtga tcatgggttt gagtcccatg ctgggcgcct 1381 atcagactgt ggagcaattg ctccccttgt tccttattca actcaaggat gagtgcccag 1441 aagtgcgcct aaacatcatc tcaaacctgg attgcgttaa cgacgtcatc ggcatccagc 1501 aattgtcaca gtcgcttctg cccgcaatcg tcgagctggc cgaggactcc aagtggcgtg 1561 tgcgtctagc catcatcgag tacatgcctg ctctggccgg tcagttgggt caggaattct 1621 ttgaccaaaa actgcgcggt ctctgcatgg gatggctcaa cgatcacgtg tacgccattc 1681 gtgaggcagc caccctcaac atgaagaagc tcgtcgagca gttcggagct ccctgggccg 1741 aacaggccat aattccaatg atcctggtca tgtcgcgcaa caagaactat ttgcacagaa 1801 tgacttgctt gttctgcctg aatgttttgg cagaggtctg cggcacagat atcaccacca 1861 agttgctgct gcccacagtt ctcctgcttg ccgctgatcc cgttgccaat gttcgtttca 1921 acgtggcaaa gaccctgcag aagatctcgc ccttcctgga ggccagcgtc attgatgccc 1981 aagtaaagcc cacactcgac aaactgaaca cagacacaga tgtggatgtc aagcattttg 2041 ctgcacaggc cattgccggc atagctgcag cgtaatcaac cttcttgcat ctttttttat 2101 tctattttta aaaatgtatg tatttaacgc cggcaacaaa acatattatg tagcaacaac 2161 acttaagaac ggaaaattgt agtggatccc ggaaggtgtt aaacgctgca gccgatgctg 2221 gatgagggat gaatggagcc aggagtcaaa ggaaggagag aatcggagaa tcagcatggg 2281 aggagaccca ctaaacgcga cacacaacta aacattaata cttacatact tatattatat 2341 ataaattacc ataggcataa cgatcattat taaaaacatt tgtagagttt ggaacatttg 2401 atcgcatctg aatgcaaaaa taaaattgta gtgaaacaat a //