Dbfetch
LOCUS XM_002078067 1362 bp mRNA linear INV 03-NOV-2021
DEFINITION PREDICTED: Drosophila simulans uncharacterized LOC6730940
(LOC6730940), mRNA.
ACCESSION XM_002078067
VERSION XM_002078067.4
DBLINK BioProject: PRJNA695671
KEYWORDS RefSeq.
SOURCE Drosophila simulans
ORGANISM Drosophila simulans
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_052520.2) annotated using gene prediction method: Gnomon,
supported by EST evidence.
Also see:
Documentation of NCBI's Annotation Process
On Nov 3, 2021 this sequence version replaced XM_002078067.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila simulans Annotation
Release 103
Annotation Version :: 103
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 9.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1362
/organism="Drosophila simulans"
/mol_type="mRNA"
/strain="w501"
/db_xref="taxon:7240"
/chromosome="2L"
/sex="female"
/tissue_type="whole body"
/dev_stage="adult"
/collection_date="2016-12"
/collected_by="Erika Gajda"
gene 1..1362
/gene="LOC6730940"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 11 ESTs, 1 Protein, and 100%
coverage of the annotated genomic feature by RNAseq
alignments"
/db_xref="GeneID:6730940"
CDS 83..1186
/gene="LOC6730940"
/codon_start=1
/product="uncharacterized protein LOC6730940"
/protein_id="XP_002078103.2"
/db_xref="GeneID:6730940"
/translation="MQNVNQHKHGNSASRRRILDWINNNLGTTHVRLEELRSGAEYCQ
LLHKLQPSAIRLKKVIKDPKSQYECVQNMKLLQKSLCKQGVQKQIPIQRLVSRGNIES
LEFAQWFKAFYDHNYQLLRPEKTEDSPKTLEIFHEKPDSFVDTGKGSYDRLESTASSQ
SEKNLEINQEKKTIKSDEEQVSLIPELDSSPDELSLHPLEGSSQSTYELIPKNALPID
VIDFQEQNSQRSQSNNCNSEDITMAGESSGSTEIDIMKIEPEEGNRCKDSNGPLLGKY
LDGPLPWCRPFKLRRTFDFHEVKSVKIKKLVDGSAPISSEEECSSDDFNKDMEAKIVS
IWKDIHNVIKALQRIEQNWYRNKINERRTTFKH"
polyA_site 1362
/gene="LOC6730940"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
1 gtaacacatt cagtttaacc aagtgagtga cacgaacacg tctagtttac taacagcatt
61 ttcactttcc taattttatg taatgcaaaa cgtaaatcaa cacaaacatg ggaattctgc
121 gtcccgtcgc agaatccttg attggataaa caacaatctt ggcaccactc acgttcgttt
181 agaggaactg cgatccggcg cggaatattg ccaattgctt cataagctgc aaccttcggc
241 gattaggttg aaaaaggtca tcaaggatcc gaagagccaa tacgaatgtg tgcaaaatat
301 gaaattgctg caaaagagcc tctgcaaaca gggcgttcag aagcaaatac ccattcagcg
361 gctggtttct cgtggtaata tcgagagttt ggagtttgcc cagtggttca aggcattcta
421 tgatcataac taccagctgt tacggcccga aaagaccgaa gattcaccga agacactaga
481 aatattccac gaaaagcctg acagtttcgt ggataccgga aaaggcagtt atgatagatt
541 agaatcaact gcaagcagtc aatcagaaaa gaatttggaa atcaaccagg agaagaaaac
601 tataaaatca gatgaggaac aagtttctct tataccagaa ttggattctt cgccggatga
661 attgtcgtta cacccacttg agggctcttc gcagtccacc tatgaactta ttcctaaaaa
721 tgcactgcca atagacgtta ttgattttca ggaacaaaat tcacaacgaa gtcaatcaaa
781 taattgtaat tctgaagata ttaccatggc aggcgaatct tcggggtcaa cagaaattga
841 tataatgaaa atcgaacccg aagaaggtaa tcgctgtaag gactccaatg ggccacttct
901 cggaaaatat ttggatggac ccctcccctg gtgtagacca tttaaacttc ggcgcacatt
961 tgattttcat gaagtgaaaa gcgttaaaat caaaaagttg gtagatggat ccgccccaat
1021 ttcgtcggaa gaagagtgct cttccgatga tttcaacaag gatatggaag caaaaatcgt
1081 ttcgatatgg aaagatattc ataacgttat taaagcccta caaaggatcg agcaaaattg
1141 gtaccgcaat aagattaatg agagaagaac aacatttaag cattgattat aaggagatag
1201 caaagtttga agtttgcaca gaatatagtt agatttacat atttatatat gtacgttttc
1261 agatatgttt cggccaagtt gttcaccaaa actccgtaat tcagctcgac taaaaataaa
1321 ttttaatgta ttacctccca aaataaaata tgactaactg aa
//