Dbfetch
LOCUS XM_001954854 3627 bp mRNA linear INV 21-OCT-2021 DEFINITION PREDICTED: Drosophila ananassae protein CLEC16A homolog (LOC6499312), transcript variant X2, mRNA. ACCESSION XM_001954854 VERSION XM_001954854.4 DBLINK BioProject: PRJNA765704 KEYWORDS RefSeq. SOURCE Drosophila ananassae ORGANISM Drosophila ananassae Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_057927.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 21, 2021 this sequence version replaced XM_001954854.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila ananassae Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3627 /organism="Drosophila ananassae" /mol_type="mRNA" /strain="14024-0371.13" /db_xref="taxon:7217" /chromosome="2L" /sex="pooled male and female" /tissue_type="whole organism" /dev_stage="adult" /note="cured of Wolbachia by treatment with tetracycline" gene 1..3627 /gene="LOC6499312" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 116 samples with support for all annotated introns" /db_xref="GeneID:6499312" CDS 261..3473 /gene="LOC6499312" /codon_start=1 /product="protein CLEC16A homolog isoform X2" /protein_id="XP_001954890.1" /db_xref="GeneID:6499312" /translation="MFRSRSWFGGPWGGRPKNRLSLDHLKYLYSILEKNTTVSENNRG LLVESLRCIAEILIWGDQHDSLVFDFFLEKNMLSYFLHIMRQKSGGSSFVCVQLLQTL NILFENIRNETSLYYLLSNNHVNSIMVHKFDFSDEDVMGYYILFLKTLSLKLNTHTIH FFYNEHTNDFPLYTEAIKFFNHPESMVRIAVRTISLNVYKVQNSSMLRFIRDKTAAPY FSNLVWFIGKHILELDTCVRTDIDHQSNQKLSNLVAEHLDHLHYLSDILLLDIKDLNA VLTEHLLHKLFVPLYIFSLTPAPPPPSLAVVTQNLAAVLNRNVDIDIQEIQHPRVSSI VALYLLSLVFLVVSHAPLVHALAWVILNGDHSVFKEGAAEILNSYVERREAVVPGFGE PVESLEQALDTVTGQGSTSSYALSEDSGVESSSPVATEAESQAEAVESGDTKLRNITD EEKQRLQQSTSSAKADFGELAKPFLDTVLHALDCTENDYLALLSLCLIYAMSHNRGIK NEWFEQVLAKSTRGSFSYKTALIEQLLNIITQSSQPSCRIRLITVEIALELLVTFTRP SSDEARCITPSQQDLLFSARNQSMVVLRNFYKSEDIFLDLFEDEYNEMRKAQLNVEFL CMDSAILLPPTGTPLTGIGFTRRLPCGEVEKARRAIRVYFLLRRTCQKFLNEKECLLP LTNAVNLVQVENVLDLNNSDLIACTVVAKDSTKQRRFLVIDALQLILVEPDAKLLGWG VAKFVGFLQDVEVQGDKDDSRCLHITVHRGGVTHNRTPLLSAKFLFDDHIRCMAAKQR LTKGRSKARQKKMYQIAQLIEIPGQMDSPVFAVGGTMAIPSGSGSANSSGSSSRSGHH RPMFSTANRVPGFAAVLRGGNSAGVSRTQMAQNRSIEGIRNESAGRSRRRSPTSTMGS NLRADHSDRERSPSVSLCSQTSSQSRENSQPRSAGNRSRDNSPRMPRPRSEEIPLEDF QHSRTNSPHSRGNHSPASRSHTPSRMHLYDQISVHSGSPREATNLVGTNALLSQLNGV PMGREVIAVQSSEETSFIGNDGNDSAGCSEARRRGIIETV" polyA_site 3627 /gene="LOC6499312" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atattaatga atcaacagct gactgtgaca cttgtattct cgcgaagaag aagtgtgttt 61 gtattgttga aaaaaagaat cgcaattcgc caattataaa attcgaaaca tacaatcaca 121 agcaactggg atatctgatt tacggcttag tgtttggcgt gtgtggtagc agtggtgcgt 181 ttcacaatcc gcaacttcac accctgatat gagagcatcc aggtggacag gggcgagttg 241 attataatcc agttgccaac atgttccgca gccgtagctg gtttggcgga ccttggggcg 301 ggcggccaaa aaaccgcttg tcccttgacc accttaagta cctgtacagt attttggaga 361 agaacaccac cgtatcggag aacaatcgcg gattgctggt tgaatctctg cggtgcattg 421 ctgaaatcct catctggggt gaccagcacg actctctggt attcgatttc tttctggaga 481 agaacatgct atcctacttt ctgcacatca tgcgtcagaa gagcggaggc tccagcttcg 541 tgtgtgtgca gttgctgcag accctcaaca ttctgttcga gaatatccgg aatgagacgt 601 ccctgtatta tctgctgagc aataaccatg ttaactctat tatggtgcac aagttcgatt 661 tttccgatga ggatgtgatg ggctactata tcctcttcct aaagacgctg agtttgaagc 721 tgaacaccca caccattcat ttcttctata atgagcacac aaacgacttt cccctgtaca 781 cggaagccat taagttcttt aatcacccag agtccatggt gaggattgct gttcgaacga 841 tttccttgaa cgtctacaag gtgcagaact ccagcatgtt gcggtttatt agggacaaaa 901 cggcagctcc ttattttagt aatttggttt ggttcattgg taagcacatt cttgagctgg 961 atacatgtgt tcgcacggac atcgaccatc agtcgaacca gaagctatcc aatctagtgg 1021 cagagcacct ggaccatttg cactacctaa gtgacatcct gctgctggac attaaagatc 1081 tgaacgcagt gctcacggaa cacctgctac acaagctgtt tgtgcccttg tacatatttt 1141 ccttaacgcc agctcctccg ccgccctccc tggcagtagt cacccagaac ctagccgccg 1201 tcctcaaccg taacgtcgac atcgacatcc aggagataca gcatccgcgc gttagctcta 1261 tcgtagctct gtacctgctt tctctggtat ttttggttgt atctcacgca ccgttggttc 1321 atgctctggc atgggtgatc cttaacggcg atcatagtgt gttcaaggaa ggcgctgccg 1381 agatcttaaa ctcatacgtg gagcgccgag aggctgtggt acccggtttt ggggaacccg 1441 ttgaaagtct tgagcaggcc ctggacacag ttacgggtca gggaagtacc tccagctatg 1501 ctttaagcga agacagtggc gttgagtcat cttctccggt agccacagaa gccgagtctc 1561 aagcggaagc cgtggaatcg ggggatacaa aactacgcaa cataacagat gaggagaagc 1621 agaggttgca gcagtctacc tcttccgcga aggcggactt tggtgagctg gccaagccgt 1681 ttttggatac agttctacat gccttggatt gtacggagaa tgactatcta gctctgctat 1741 cgctgtgcct catctacgcc atgtcgcaca acagaggtat taagaatgag tggtttgagc 1801 aagttctggc aaagtctaca agaggttcat ttagctacaa gacagccctg atagagcagt 1861 tgcttaacat catcacccag tccagtcagc catcctgccg cattcgtctg ataactgttg 1921 agatcgcctt ggaactgctg gttactttca ccagacccag ttccgatgag gcccgttgca 1981 tcaccccctc gcaacaggat cttctcttca gcgcccgaaa tcagtcgatg gtggtgctgc 2041 gaaacttcta caagtcggaa gatatctttc ttgacctttt tgaggatgaa tacaatgaga 2101 tgcgcaaagc tcagttgaat gtcgagttct tgtgtatgga ttctgcaatc ctattgccgc 2161 ccacaggaac acctctaacg ggtatcggtt ttacacgtcg attaccctgc ggggaggtgg 2221 agaaggcaag gcgggccatc cgcgtatatt ttctgctacg ccgtacgtgc caaaagtttc 2281 tcaacgagaa ggagtgcctg ctgcctctga cgaatgccgt aaatctcgtt caagtggaga 2341 atgtactaga tttaaacaac agcgacctaa tcgcgtgtac cgtggttgcc aaagacagca 2401 ccaaacagcg gcgattcctc gtcattgacg ctctccaact gatcctcgtt gaaccagatg 2461 ccaagctgct cggctggggg gtagccaagt tcgtgggctt cctgcaggac gtggaggtgc 2521 aaggtgataa ggacgattcc cggtgtctcc acatcactgt ccaccggggc ggagttaccc 2581 ataaccgcac tccgctactg tctgccaagt tcctgttcga cgaccacatc cgctgcatgg 2641 ccgccaagca acgcctgaca aagggtcgca gcaaagcgcg ccagaaaaag atgtaccaga 2701 tcgcgcagct catcgagatc ccgggacaga tggactcgcc cgtatttgct gtgggcggga 2761 ccatggcgat cccttctgga agtggcagcg ccaatagcag tggaagcagt tcccgcagtg 2821 gccaccaccg accaatgttt tcaacggcga accgcgttcc aggattcgct gcagttctaa 2881 gaggaggcaa tagcgccggt gttagccgaa cccaaatggc ccaaaaccgc tcaatcgagg 2941 gcatacgaaa cgaaagcgcg ggtcgctcca ggcgacgcag tcccacctcg acaatgggct 3001 cgaatctgag ggcggatcac tccgaccggg agaggtctcc tagtgtaagt ttgtgcagcc 3061 aaacttcttc gcagtcgcgg gaaaactctc aacctagaag tgccgggaac cgatcccgtg 3121 acaacagccc caggatgccc agaccgcgtt cagaggaaat ccccctggag gacttccagc 3181 actctcgcac taatagtccg cactcacgcg gtaaccattc gcctgcctcc cgctcccaca 3241 cgcccagtcg tatgcacctt tacgatcaga tttctgtgca cagcgggtcc cctcgagaag 3301 caactaacct ggtcggcacg aatgcgctac taagtcagct gaacggtgtg ccaatgggtc 3361 gggaggtgat agcagttcag agctctgaag agacctcctt tattggaaac gatggaaatg 3421 actctgcagg ttgctctgag gccaggcgcc ggggaattat agaaacggtc tagattagct 3481 taaaaattct agtgttaaaa ctcaaaaact ttatgcttag actgttgcta aaactttgtt 3541 attccaatta acttatccgg tggtatactc tatttgcttt tcattttaaa taaaagttgt 3601 tttgacgaat tttaatttaa acaaaaa //