Dbfetch
LOCUS XM_001953863 4711 bp mRNA linear INV 21-OCT-2021 DEFINITION PREDICTED: Drosophila ananassae sodium/calcium exchanger 3 (LOC6500778), transcript variant X6, mRNA. ACCESSION XM_001953863 VERSION XM_001953863.4 DBLINK BioProject: PRJNA765704 KEYWORDS RefSeq. SOURCE Drosophila ananassae ORGANISM Drosophila ananassae Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_057927.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Oct 21, 2021 this sequence version replaced XM_001953863.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila ananassae Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4711 /organism="Drosophila ananassae" /mol_type="mRNA" /strain="14024-0371.13" /db_xref="taxon:7217" /chromosome="2L" /sex="pooled male and female" /tissue_type="whole organism" /dev_stage="adult" /note="cured of Wolbachia by treatment with tetracycline" gene 1..4711 /gene="LOC6500778" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 46 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns" /db_xref="GeneID:6500778" CDS 781..3633 /gene="LOC6500778" /codon_start=1 /product="sodium/calcium exchanger 3 isoform X3" /protein_id="XP_001953899.1" /db_xref="GeneID:6500778" /translation="MQLLLKSIFTCALFVIFVYATAQSLAKVQQNDERYTLLNGTSSS GSNLSRDHFLSRRLRQAGQGEEGEQGAPVRIDDENKDDPLQASGPEEEELRECSEGLV LPLWMPQRNISIGDRLVRGFVYFLLLVYLFVGVSIIADRFMASIEAITSIERAVVVRG PHNEKQVMHVRIWNETVANLTLMALGSSAPEILLSVIEIYAKDFESGDLGPGTIVGSA AYNLFMIIAVCMIWIPTGEVRRIRHLRVFTVTAAFSIFAYVWLWLILSVFTPGIIAVW EAIVTLLFFPLTVLWAYIAERRLLVYKYMDKNYRVNKRGTVVAGEHDQVEMDAEKGGP RGSISTPTTRGGEAEAFDEARREYIQVLTELRQKYPDAELEQLEMMAQEQVLARSNKS RAFYRIQATRRMVGSGNLMRKIQERAHSDLTEVKAQLHPSEDDDGDEPTRVYFEPGHY TVMENCGEFEVRVVRRGDISNYATVSFETQDGTASAGTDFVGKRGQLNFPPGVDEQRF RIEVIDDDVFEEDECFYIRLFNPSENLKLAVPQIATVMILDDDHAGIFAFTDSAFEIS ESVGLYEVKIMRYSGARGTVIVPYWTESGTATPGKDYEETHGELVFENNETEKIIEVL ILEESSYEKDVSFKVHIGEPRLAPDDELAAKIEEVEKKLPQDLTELDRILLLSKPRNG ELTTAYVRIRESQEFKATVDKLVAKANVSAVLGTSSWKEQFKDALTVLPSDETDFDND DEVEEEVPSCFSYISHFVCLFWKVLFAFVPPTDICGGYVTFVVSIFVIGVITAIIGDA ATYFGCALNIKDSVTAILFVALGTSIPDTFASMIAAKHDEGADNCIGNVTGSNAVNVF LGIGLAWTIAAVYHSSQGMTFNVEPGTIGFAVALFCGEALIAILLIMVRRWTKGIGAE LGGPKVSKYISAGILVFLWVSYVVICTLEAYDVIQI" polyA_site 4711 /gene="LOC6500778" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tccgctgcca aagtggcgat atagcaacga tccacatggc acgcgatccg tgtgcgggtg 61 cggatgggaa agcgaaccgg ctctgattta tacttcatga atatcaaaat cgaaacggag 121 ctgacgcttt aattaaaaga cacacaccga aaggaccgag agcggacccc aaggtgagtc 181 cccacaccac ctccccatcc acccgtcccg tccgagagcc cgtggcaaga ccgttatctc 241 atcgccggtg ccggtagagc tgtcaacgga ctttggcaac tggatgagcg gcagctcagt 301 tgcttgccag gaagcaagcg aaagccaccg accaaccggg cggaagaaac tatgcattgt 361 cacgtctgag gcaaagtgct gggcaatctt ctatccacct cctccaagga gttcccacat 421 tcagcggata ccgttcaagc aactggcccg ttggccccgc atgtccagac ccagcccacc 481 ccagcccaaa gtccagagta aagcccagag tgcagcggcc ctactgcgtc agagtgttga 541 acgagaatgc ctccgcgtgg tagcacgtca tagtgtcacc atcatatgca actagaaact 601 agcagcagca ccaccaccac caccaccacc accagcacaa aaccacagcc aaatcgaacg 661 caacaaagct tccagagaca ggccaagagg aggagaagat cccgcttcca ggagaagtag 721 tacccccaaa cccaatctaa tctaacactt tgtagaacca gttactagag acgcagtacc 781 atgcagctgc tcctcaaatc gatcttcacc tgcgcactat tcgtgatctt tgtgtacgcc 841 actgcccagt cgctggcgaa ggtgcagcag aacgacgagc ggtacacgct cctcaatggg 901 acgagcagta gcgggagcaa tctcagccgg gaccacttcc tcagccggcg gctgcggcag 961 gcgggtcagg gcgaggaggg cgaacaaggg gcgccggtga ggatcgacga cgaaaacaag 1021 gacgatccac tgcaggcctc cggtccggag gaggaggagc tacgcgagtg cagtgagggc 1081 ctggtcctgc ccctatggat gccccagcgg aacatttcca taggcgaccg gctcgtgcgc 1141 ggcttcgtct atttcctgct attggtctac ctgttcgtcg gtgtctccat cattgccgac 1201 cgctttatgg cctccatcga ggccatcacc tccatcgaac gggcggtggt ggtacgcggt 1261 ccccacaacg agaaacaagt gatgcacgtc cgcatttgga acgagacggt ggccaatctc 1321 acgctgatgg ccctgggctc gagcgccccc gaaatcctgc tctcggtgat cgaaatctac 1381 gccaaggact tcgagagcgg tgacctggga ccgggaacca ttgtcggctc tgccgcctac 1441 aacctgttca tgatcatagc ggtgtgcatg atctggatcc caaccggcga ggtgcgacgc 1501 atccggcatc tgagagtgtt caccgtgacg gccgcattct ccatcttcgc ctacgtgtgg 1561 ctttggctca tcctgtccgt gttcacgccc ggcatcatcg ctgtgtggga ggcgatcgtg 1621 acgctgctct tcttcccgct cacagtgctt tgggcgtaca ttgcggagcg gcggctgctg 1681 gtctacaaat acatggacaa gaactaccgg gtgaacaagc gcggcaccgt cgtcgccggc 1741 gagcacgacc aggtggaaat ggatgcggag aagggcggac ctcggggctc gatttcgacc 1801 cccacgacgc ggggcggcga agcggaggct ttcgacgagg cccgtcgcga atacatccaa 1861 gtgctgaccg agctgcgcca aaaatatccc gacgccgaac tcgagcagct cgagatgatg 1921 gcccaggagc aggtgctggc gcggagcaac aaatcgcgcg ccttctaccg catccaggcc 1981 acccgccgta tggtcggcag cggcaacctg atgcgcaaga tccaggagcg ggcccacagc 2041 gacctaaccg aggtgaaggc ccagctgcac ccgagcgagg acgatgacgg cgacgagccc 2101 acccgcgtct actttgagcc cggccactac accgtcatgg agaactgcgg cgagttcgag 2161 gtgcgcgtgg tccgacgggg cgacatctcc aactatgcca ccgtttcctt cgagacccag 2221 gacggcaccg cctcggccgg cacggacttt gtcggcaagc ggggtcagct gaacttcccg 2281 cccggcgtcg acgagcagcg cttccgcatc gaggtcattg acgacgacgt cttcgaggag 2341 gacgagtgct tctacatccg tctcttcaat ccatcggaga acctaaaact ggccgtgccg 2401 cagatcgcca ctgtcatgat cctggacgac gatcacgccg gcatcttcgc cttcacggac 2461 tcagccttcg agatctccga gtcggtgggt ctttacgagg taaagattat gcgttactcg 2521 ggagcccgcg gcaccgtaat agtgccatac tggacggaga gcggcaccgc cacgccgggc 2581 aaggactacg aggaaacaca tggcgagctc gttttcgaga acaatgaaac agagaaaatc 2641 atcgaagtcc ttattctgga ggagagcagc tacgagaagg atgtcagctt caaggtgcac 2701 attggggaac cacggctggc tccagacgac gaattggcag ccaaaatcga ggaagtggaa 2761 aagaagttac cccaggacct gaccgaactg gatcgcatcc tgttgctgag caagccccgg 2821 aacggagagc tgaccaccgc ctatgtgcgc attcgcgaga gccaggaatt taaggctacg 2881 gtggacaaac tggtggccaa ggcaaatgtt tcggcagttc ttggaacatc ctcttggaag 2941 gagcagttca aagatgccct cacagttcta ccatctgatg aaaccgattt cgataacgat 3001 gatgaggtag aggaggaggt gcctagctgt ttcagctaca taagccactt tgtctgcctc 3061 ttttggaagg ttctctttgc atttgtgccg cccacagata tttgcggcgg ctatgttacc 3121 tttgtggtat cgatattcgt cattggcgtc atcaccgcca tcattggaga tgccgcaacc 3181 tatttcggct gtgctctcaa catcaaggac tctgtaaccg ccattctgtt cgtcgctctg 3241 ggcaccagta taccagacac ttttgcgagc atgatagcgg ccaagcacga tgagggggca 3301 gacaactgca tcggcaatgt cacgggcagc aatgcggtta acgtttttct gggcatcggc 3361 cttgcttgga ccatcgcagc tgtctaccac agctcccaag ggatgacctt caacgtggaa 3421 ccgggaacga ttggctttgc tgtggcgctc ttctgcggcg aggctttaat tgccatcctg 3481 ctgatcatgg ttcggcgctg gaccaagggc atcggagccg agctgggtgg tccaaaggtc 3541 agcaagtata tcagcgctgg catcctggta tttctttggg tctcctacgt ggtcatctgc 3601 acactggagg cctacgatgt catccagatc taaggagctc aacaaaccgc attgctttca 3661 ctttggcgtt ggctttgtta tttgcattgg cgttcagttt tcagcaaagt atggtatcaa 3721 tgaaagttgg aacaagtttt gggcaaaact ggctaaccgg ccgcgaatga gaaatgagat 3781 gctgcaggaa gcaattttta tatgtaaact aatggtgtat atgggcgctc ggcgattata 3841 tacccaatta tatttattat gtaaaattta tgttaatact aaaagtaaaa ttgtaatgtt 3901 taactaggtt taagtcaggc ttatatatat agaaaaaaca aaaaatattt tccgattttt 3961 attgtctcta ttcatattat gaattgtaaa tacagaaagg ctgccacggc tcagcaatct 4021 tgtaattgta aacgagatat cattcattgt tatgccatat atacttaatt ttattattaa 4081 atactattat atttattatg tcactctgtg tacaacttaa gtcattgttg ttgtttgtta 4141 aagctgtact taatccaccc acacggaaag gaaaccaaaa atccaaagaa accgaacatc 4201 acaattgcct gaaactctgt gggggggagc ttaagttttt tttttaattc gataaatgtc 4261 tctccatctg ccgaaaacca ttgttaattt aatacatgtg taagttttag aagagtccaa 4321 actttttagc caagaagagt cgtaatcgct acttaaccat ctactgctac aaataacaag 4381 taactactct ttaccaaata ggagcctcca ctgcaactag ttctagtcta gtcactctca 4441 ctatcgacac aaatccaaac cactagttac ggcatttttc actaactttg accaaataga 4501 gcaaatggcg gcactactta cctagagact agcaagaaag accactactc cgacttgaga 4561 gcactaatca atttacttaa aaaagacttt cactttgctt gtgtcgctgg cagtgatcga 4621 agatcgaaat ctggataaaa atactactgg atattaaggc aaacaccaaa caaaacaaaa 4681 aacaacaaag caaaaccaaa taacaaatac a //