Dbfetch
LOCUS NM_171472 1922 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Aldehyde dehydrogenase (alh-4), mRNA.
ACCESSION NM_171472
VERSION NM_171472.6
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1922)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1922)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1922)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1922)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003283).
On Feb 2, 2021 this sequence version replaced NM_171472.5.
FEATURES Location/Qualifiers
source 1..1922
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="V"
gene 1..1922
/gene="alh-4"
/locus_tag="CELE_T05H4.13"
/db_xref="GeneID:179026"
/db_xref="WormBase:WBGene00000110"
CDS 5..1486
/gene="alh-4"
/locus_tag="CELE_T05H4.13"
/standard_name="T05H4.13b"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Aldehyde dehydrogenase"
/protein_id="NP_741554.1"
/db_xref="EnsemblGenomes-Gn:WBGene00000110"
/db_xref="EnsemblGenomes-Tr:T05H4.13b.1"
/db_xref="EnsemblGenomes-Tr:T05H4.13b.2"
/db_xref="GeneID:179026"
/db_xref="GOA:Q8MXJ7"
/db_xref="InterPro:IPR012394"
/db_xref="InterPro:IPR015590"
/db_xref="InterPro:IPR016161"
/db_xref="InterPro:IPR016162"
/db_xref="InterPro:IPR016163"
/db_xref="UniProtKB/TrEMBL:Q8MXJ7"
/db_xref="WormBase:WBGene00000110"
/translation="MAFTELVETQRKYFRTGETKPVKFRKQQLLKLKKFIEENREALS
EAVWKDLRRRHESTEILEIGMTIQEIDYFLKNIDDWVKPTHVEKTFTTALDKPVIEKD
PKGVVLIISPWNYPVSMILLPMVPAIAAGNTVVIKPSELSENVAATFEKLIPKYFESK
YVTVVNGGIPETTDLLKERFDHILYTGCPPVAKIIMTAAAKHLTPVTLELGGKCPVVV
EDDADIDISAKRIAWGKWLNCGQTCLAPDYILVNSTVKPKLVAAIRKYVNEFYGEDVK
ASKDYARMINQRHFDRISGLLDKTQGAVLIGGERDRADLYIPPTVLDVEKSDPFMHDE
IFGPVLPIITVQSFSESLEYIADGEKPLAAYIFTRNEAKVKRLLNETSSGGVTVNDVL
MHITVDTLPFGGVGVSGMGRYRGKYGFDTFTHEKSVLHRGFFGESLLAARYPPLSQQK
LDQMRRLTGKRISLNLMNVATLPIVMASFVFGMLFQFIFRFSA"
ORIGIN
1 agaaatggca ttcaccgaac tagtggaaac ccaacgcaag tacttccgta caggagagac
61 aaaaccagtc aaattcagaa aacaacaact tctgaaactt aaaaagttta tcgaggagaa
121 ccgcgaggct ttgtcagaag ctgtttggaa ggatttgaga agacgccatg aatccactga
181 aattctagaa atcggaatga ccattcaaga gattgactat ttcttgaaga acattgatga
241 ctgggtgaag ccaacccacg ttgagaagac cttcacaact gctctcgata agccagtaat
301 tgagaaagat ccaaaaggag ttgtactcat catctcccca tggaactatc cggtctctat
361 gatccttctc ccaatggttc cagcaattgc cgccggaaat acagttgtga tcaaaccatc
421 cgaactgtcc gaaaatgttg ccgcaacttt tgagaagctc attccaaagt atttcgagtc
481 aaaatacgtg actgtcgtga acggaggtat cccagagact accgatttgc tcaaagagcg
541 attcgatcat attctataca ccggatgccc accagttgcc aaaattatta tgacagcagc
601 tgcaaagcat ttgacaccag tcacattgga attgggaggc aaatgcccgg tcgttgttga
661 agatgatgct gacattgata tttctgctaa aagaatcgct tggggaaaat ggctgaactg
721 cggacaaact tgtctggcac cagactacat tcttgtgaat agcactgtga agccgaagct
781 tgttgccgca atccgcaaat atgtgaacga attttatggc gaggatgtga aagcaagcaa
841 ggattacgcg agaatgatca atcagagaca tttcgatcgc atctctgggc ttctcgataa
901 aactcaagga gctgttctta tcggtggaga acgtgatcgt gcagatctct acatccctcc
961 aactgtcctt gacgttgaga aatctgatcc attcatgcat gatgagattt ttggtccagt
1021 cctgcccatc atcactgtcc agtctttctc ggagtcgctt gagtacattg ctgatggaga
1081 gaagcctctg gctgcttaca ttttcacaag aaatgaagct aaagttaaac gccttttgaa
1141 tgagactagc agtggtggtg tgactgttaa cgatgtgttg atgcacatta ctgttgatac
1201 tctcccgttc ggaggagtag gtgtctctgg aatgggacgt taccgtggaa agtatggatt
1261 tgacacattc acccatgaaa agtctgtgct tcacagagga ttcttcggag aatctctttt
1321 agcagctcgt tacccgccac taagccaaca aaagctcgat caaatgcgac gcctcacggg
1381 aaaacgaatc tctctgaatc tgatgaatgt tgcgactctt cctatcgtaa tggcctcatt
1441 cgtttttgga atgctcttcc agttcatttt ccgcttctcg gcataaaatc gagacatgct
1501 ggtggaggtg gcaaacgcga aatggcgtac agtaggctcg gtgtttgcgg actagtcgtg
1561 cggtcaatgt tcactcttac gtactttcac accactattc ttcttccgtc tcgccctatt
1621 ttttaacttc tttttttttt cacaaattcc tagtcaattt tttcaccgga tcttctaatc
1681 attccataaa ctctagtcca taaccaattc ccgcatgaaa agtgtcccca aatattaaaa
1741 attcgtgtag tttcaattta aagcaataat tttattaatt ttcattcccg atattttcag
1801 aaatatgctc gcaatcttca ttgatccgcc aaacgttcat tttcattttt tttttaaatt
1861 ttcctcccct ctcttgagta tgtttatttt tgtaaatatt ttaataaatc attgttttgt
1921 gg
//