Dbfetch
LOCUS NM_171350 2572 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Suppressor of hairless protein homolog (lag-1), mRNA. ACCESSION NM_171350 VERSION NM_171350.7 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2572) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2572) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2572) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2572) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On May 27, 2020 this sequence version replaced NM_171350.6. FEATURES Location/Qualifiers source 1..2572 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene 1..2572 /gene="lag-1" /locus_tag="CELE_K08B4.1" /db_xref="GeneID:177373" /db_xref="WormBase:WBGene00002245" CDS 10..2031 /gene="lag-1" /locus_tag="CELE_K08B4.1" /standard_name="K08B4.1a" /note="Confirmed by transcript evidence" /codon_start=1 /product="Suppressor of hairless protein homolog" /protein_id="NP_741410.1" /db_xref="GeneID:177373" /db_xref="GOA:G5EDU7" /db_xref="InterPro:IPR008967" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR014756" /db_xref="InterPro:IPR015350" /db_xref="InterPro:IPR015351" /db_xref="InterPro:IPR036358" /db_xref="InterPro:IPR037095" /db_xref="InterPro:IPR040159" /db_xref="UniProtKB/TrEMBL:G5EDU7" /db_xref="WormBase:WBGene00002245" /translation="MPLAYSTHDNFYESPKTPQPTWDHVHAQFPLGEPARNLDKFIVP EAMFQSVSPLAGVAAAPSQIAALQQIQALMTFQMQQNNLFPKIDTISKSPTPELASPS AKRMRLSPSTSSHSDVASTSKGTNGQDQSKNSPTNSDPFYTIGQSTPNTSSFLDTSNS SFGAPSTVVANPMTNYQLAFQAKLGSLHSLIGDSVQSLTSDRMIDFLSNKEKYECVIS IFHAKVAQKSYGNEKRFFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIEND PIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISD SDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTDCKYLCIASGTKV ALFNRLRSQTVSTRYLHVEGNAFHASSTKWGAFTIHLFDDERGLQETDNFAVRDGFVY YGSVVKLVDSVTGIALPRLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYL CLSHDKIIQHQATAINEHRHQINDGAAWTIISTDKAEYRFFEAMGQVANPISPCPVVG SLEVDGHGEASRVELHGRDFKPNLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQT HWMFTNRTTGDVEVPISLVRDDGVVYSSGLTFSYKSLERHGPCRIVSNY" ORIGIN 1 tttcaggaaa tgcctctcgc ctactcaaca cacgataatt tctacgaatc gccgaaaaca 61 ccgcagccaa cctgggatca cgtgcacgca cagtttccac tgggtgaacc cgcacgaaat 121 ctggataagt ttatagttcc agaagcaatg ttccagtcgg tatcgccgct ggccggtgtc 181 gctgcagcgc cgagccaaat tgccgcactt caacagatac aagcgttgat gacatttcaa 241 atgcagcaga ataatttatt tcccaaaatt gacactatat cgaaatcgcc aactccagaa 301 ctcgcatctc catcggcaaa acgaatgaga ctttctccca gtacgagtag ccacagtgat 361 gtcgcatcaa cttcgaaagg aacaaatggg caagatcagt cgaaaaattc gccgacaaat 421 tctgatccat tctacacaat cgggcagtca actccaaaca catcatcatt cctggacact 481 tcaaattcaa gttttggagc tccgtcaaca gtggttgcca atccgatgac caactatcaa 541 ttggcatttc aagcgaaact cggaagtctt cacagtttga ttggagattc tgttcaatcg 601 ttaacaagcg atcgaatgat tgatttcttg tcaaacaagg agaagtacga atgcgtcata 661 tcgattttcc atgccaaagt tgcccaaaag tcatatggaa atgagaaaag attcttctgc 721 ccaccaccat gcatttatct tattggccaa ggctggaaac tcaaaaagga tcgtgtcgct 781 caactgtaca aaacactcaa agcttcagct caaaaggatg ctgcaatcga gaatgatccg 841 attcacgagc aacaagccac agaactcgtc gcctacattg gaatcggatc agacacttcc 901 gagcgacaac aacttgattt ttcaacggga aaagttcgac atcctggaga tcagaggcag 961 gatccaaata tttatgatta ttgtgccgcg aagactctgt atattagtga ttcggacaag 1021 agaaaatatt tcgatttaaa tgctcaattc ttctatggat gtggaatgga aattggagga 1081 ttcgtatcac aaagaatcaa agtaatctca aaaccatcga aaaagaagca aagtatgaaa 1141 aatacggact gcaagtatct ttgtattgcc agtggaacca aagttgctct attcaatcgt 1201 ctccggtcac agacagtcag tacaagatac cttcatgttg agggaaatgc attccatgct 1261 tcctccacga aatggggagc ctttactatt catctttttg acgacgaacg tggtttgcaa 1321 gagactgata attttgcagt tcgtgatgga tttgtttact atggaagtgt cgttaagctt 1381 gttgatagtg ttaccggaat cgcactgcca agattgagaa tcagaaaggt cgataagcag 1441 caagtaattc ttgatgcatc gtgtagtgaa gaaccagtct ctcaacttca caaatgtgca 1501 ttccaaatga ttgacaatga gctcgtctat ctttgtctca gtcatgacaa gattattcaa 1561 catcaagcca cagctatcaa tgagcatcgt catcagatca acgatggagc tgcgtggaca 1621 atcatctcga ctgataaggc tgaatatcga ttcttcgaag cgatgggaca ggttgcgaac 1681 ccgatttctc catgtccagt tgtcggttca cttgaagttg atggacatgg tgaagcgtcg 1741 cgtgtcgagt tgcatggaag agattttaag ccaaatctga aagtttggtt tggagcaacc 1801 ccggttgaaa cgacgttcag aagtgaagag agtcttcatt gttcgatacc acctgtgagt 1861 caggttcgaa atgagcaaac tcactggatg tttacgaata ggacaaccgg cgatgttgag 1921 gttccaattt cattggtacg agatgatggt gtcgtctact cgtcgggtct cacattttcc 1981 tacaaatcat tggaacgaca tggaccgtgc agaattgtgt ccaattacta gattccactc 2041 tcgcgggatt actgtatctt tatattgtct cctaatttct cccaattcgt ttaaatttcc 2101 accccgggtc ctgaagcctt catttctaca tttttttctc gcttccatat gtaataatca 2161 cttttaactt acttcatttt cttgttgcaa tactttttgt ttattttctt ttttccttct 2221 tcgggtggct tttccatcat tttgttcttg gatttattat ttgcaatact ttgccgtttc 2281 tctgtgtctc ccccttctac attcatctct cagcactctc taattacagt atttttgaga 2341 aaatcctgtt gaaaatgttt cggattgaat tatactggat ttttctctgt tctaattata 2401 atcaacgcgc cctcatatta attaagtata tagatacata gatataatta acattcacac 2461 ggtggtatct cccttttttt tcggataatc tcttcaagtt tttccttttc ttttgtctcc 2521 aacattttcc ttactgaaca taaaaatttt gaaattaagc cttttttatc aa //