Dbfetch
LOCUS NM_170878 1578 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans Pantothenate kinase (pnk-1), mRNA.
ACCESSION NM_170878
VERSION NM_170878.5
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1578)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1578)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1578)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1578)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003279).
On Sep 4, 2019 this sequence version replaced NM_170878.4.
FEATURES Location/Qualifiers
source 1..1578
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="I"
gene 1..1578
/gene="pnk-1"
/locus_tag="CELE_C10G11.5"
/db_xref="GeneID:172327"
/db_xref="WormBase:WBGene00004068"
CDS 11..1360
/gene="pnk-1"
/locus_tag="CELE_C10G11.5"
/standard_name="C10G11.5a"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Pantothenate kinase"
/protein_id="NP_740867.1"
/db_xref="EnsemblGenomes-Gn:WBGene00004068"
/db_xref="EnsemblGenomes-Tr:C10G11.5a.1"
/db_xref="EnsemblGenomes-Tr:C10G11.5a.2"
/db_xref="GeneID:172327"
/db_xref="GOA:H2KYP7"
/db_xref="InterPro:IPR004567"
/db_xref="UniProtKB/TrEMBL:H2KYP7"
/db_xref="WormBase:WBGene00004068"
/translation="MGHTSVTSSRRISPRGSPPNLRRTPPKIRKVLVLREKRAAATED
QIMDDLLLSSKLKRVDSATGSVSPRVCAADALPTTTPAASTALRQTQKAPKTPYVILP
ASDTFEKFRKTSRVSVDIGGTLIKVVYSSVMDEELPEESLNGHTRKYAYEDGKRVLVN
FKKFTDMDRFINFLKEVWTDRKRGDVIHCTGGGSYKYSEIIMKELGVRLQRTDEMRSL
IFGVNFLLSTNVDESFTYHHDAIGRNKFQYRPIAADLIYPFLLVNIGTGISILKVDSP
TSYERVGGSSMGGGTFMGLGSLLTPAQNFDELLEMANRGDHRNVDKLVCDIYGGAYDE
LGLKADLIAGSMAKCNRFEETTKKQQHKPEDIAKSLLLMVSNNIGQMAYLYGTRYNLK
RIYFGGYFIRQDPITMRTLSFAINYWSKGEIEALYLKHEGYLGAMGSFLDEDGKLDD"
ORIGIN
1 ttcactcaaa atgggacaca catctgtgac gtcatccagg cgtatttcgc cacgtggcag
61 tccgccaaac ttgaggcgaa caccaccaaa aattcgaaaa gttttggtgc tgagagaaaa
121 gagggccgct gctacagagg atcagatcat ggacgattta ttgttgtcat cgaaattaaa
181 gcgagtagat tcagcgacag ggagtgtatc accacgagta tgtgctgctg atgctttacc
241 aacaactacc ccagccgctt caacagcttt acgtcaaaca caaaaagctc caaaaactcc
301 atacgtgatt ctaccagcat cggatacttt tgaaaaattt cgaaaaacta gtagagtatc
361 tgttgatatt ggtggtacac tgataaaagt tgtatactct tctgtaatgg atgaggagct
421 tccagaagaa tctctgaatg gtcacactcg gaaatatgcg tatgaagatg gaaaacgagt
481 actcgttaat ttcaaaaaat tcacggatat ggatcggttt attaattttt taaaagaggt
541 gtggactgat cgtaaaagag gagatgtgat tcattgtaca ggaggtggat cctataagta
601 ttcagagata ataatgaaag aattgggagt tcgtttacaa cgaactgacg aaatgagatc
661 tctgattttt ggtgttaatt tcttactcag tacaaatgtt gacgaaagtt tcacttatca
721 tcatgatgcg attggaagaa ataaattcca atatcgtccg attgccgctg atcttatcta
781 cccattcctt cttgtcaata ttggaaccgg tatcagtatt ctgaaagttg attcacctac
841 aagttacgaa cgagttggtg gtagttcaat gggtggtgga acatttatgg gacttggaag
901 cctgctcaca cctgctcaaa atttcgacga acttcttgaa atggcaaatc gaggagatca
961 tcgtaatgta gataagcttg tatgtgatat ttatggcgga gcatatgatg aacttggatt
1021 gaaagctgac ctgattgctg gatcaatggc taaatgtaat cgattcgaag agacaactaa
1081 aaagcagcaa cataaaccag aagatattgc aaaatctctt ctgttgatgg tcagcaacaa
1141 tattggacag atggcatatt tgtatggcac tcggtataat ttgaaaagga tatactttgg
1201 aggatatttc atccgacaag atccaatcac aatgcggacg ctttcttttg ctataaatta
1261 ttggagcaag ggagagattg aagcattgta tctgaaacac gaaggttatt tgggtgccat
1321 gggctcgttt ttggatgagg atggcaaatt agacgattaa taataaattc tcctttattt
1381 tcgagctttt ttctcagtca taatcgattc cccaatttat aatttcaatt ttttgatttg
1441 tttcaaacgt ttctcgtgtc gagaccgaac caactttgtg gcaaactctc agagatgaac
1501 tattaattgt atttatttcg cacagaggtc tatttatata tgaatataca aataaaaata
1561 ataaacttta aaattttc
//