Dbfetch
LOCUS NM_167945 2918 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster myosuppressin receptor 2, transcript variant B (MsR2), mRNA. ACCESSION NM_167945 VERSION NM_167945.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2918) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2918) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2918) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2918) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2918) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2918) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2918) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2918) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2918) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2918) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2918) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2918) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2918) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2918) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2918) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (10-NOV-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2918) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2918) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2918) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2918) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2918) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 21 (bases 1 to 2918) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-OCT-2015) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 22 (bases 1 to 2918) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 23 (bases 1 to 2918) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 24 (bases 1 to 2918) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 25 (bases 1 to 2918) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_167945.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2918 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="3L" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..2918 /gene="MsR2" /locus_tag="Dmel_CG43745" /old_locus_tag="Dmel_CG13802" /old_locus_tag="Dmel_CG13803" /gene_synonym="anon-WO0170980.160; anon-WO0170980.161; CG13802; CG13803; CG43745; Dm CG13803; Dmel\CG43745; DMS R2; DMS-R2; DmsR; DmsR-2; DMSR-2; MS-R; Myo R2" /exception="dicistronic gene" /note="Myosuppressin receptor 2" /map="62D5-62D5" /db_xref="FLYBASE:FBgn0264002" /db_xref="GeneID:38296" CDS 554..2020 /gene="MsR2" /locus_tag="Dmel_CG43745" /old_locus_tag="Dmel_CG13802" /old_locus_tag="Dmel_CG13803" /gene_synonym="anon-WO0170980.160; anon-WO0170980.161; CG13802; CG13803; CG43745; Dm CG13803; Dmel\CG43745; DMS R2; DMS-R2; DmsR; DmsR-2; DMSR-2; MS-R; Myo R2" /note="CG43745 gene product from transcript CG43745-RB; CG43745-PB; MsR2-PB; DMS-receptor2; dromyosuppressin receptor 2" /codon_start=1 /product="myosuppressin receptor 2, isoform B" /protein_id="NP_728735.2" /db_xref="FLYBASE:FBpp0303391" /db_xref="GeneID:38296" /db_xref="FLYBASE:FBgn0264002" /translation="MVTNMSQPHYCGTGIDDFHTNYKYFHGYFSLIVCILGTIANTLN IIVLTRREMRSPTNAILTGLAVADLAVMLEYIPYTVHDYILSVRLPREEQLSYSWACF IKFHSVFPQVLHTISIWLTVTLAVWRYIAVSYPQRNRIWCGMRTTLITIATAYVVCVL VVSPWLYLVTAIAKFLETLDANGKTIASVPLSQYILDYNRQDEVTMQVMSSTTPDVSW AIPSDSANGTAVSLLSLTTVIPLTTLSTGVTTSSSLGERNVTVYKLYHSALALRDRQF RNATFLIYSVLIKLIPCFALTILSVRLIGALLEAKRRRKILACHAANDMQPIVNGKVV IPTQPKSCKLLEKEKQTDRTTRMLLAVLLLFLVTEFPQGIMGLLNVLLGDAFFLQCYL KLSDLMDILALINSSINFILYCSMSRQFRSTFALLFRPRWLDKWLPLSQHDGEGRVGG SGGLGGYGGYGRQRLLHTDAVSKSMAIDLGLTTQVTNV" ORIGIN 1 cggtgccgta cgcacgtgtc tcggagtttt cccggctgaa aatataattc gaaaacgtcg 61 aaaatgtgcc gataagatga aaaatcgcaa taattgttat tttcggttta gcgcgttgaa 121 ttgaattttt cgtaatataa gttttgcgat ttgtgtaagt tgccgtcacg aattttcatc 181 ggctggtcag tgaacttttg gtcagtttat tggcatttgg tatcatttcg cccaacttat 241 atttcattta tggccgaaaa aaggtttatc tgattagcat aatggccaca acatccatgg 301 ggacactgtg cctaatgtcc tgaaaattgt attcccagaa aattgtggtg tgtaccagtg 361 attgatgtag caggtagcac tttcgccacg cagcctgcat atttgagtgt tggaatttcc 421 gaaaagggaa tttaaatgaa acgccagagg agcagcgggg cgcactgagt tggcagccgg 481 acaccgcggt caatcaaacg gagtccttgc aggacatccc accaccgact accatctggc 541 cttcattgac accatggtca cgaacatgtc gcagccgcat tattgcggca ccggcatcga 601 tgatttccac acaaactaca aatactttca cggttacttc tcgctgattg tctgtatcct 661 gggaaccatt gcgaataccc taaatatcat agtgctgacc cgacgggaga tgcgctcccc 721 cacaaatgcc atactcacgg gtctggctgt cgccgatctg gctgtgatgc tggaatacat 781 accctatacg gtgcacgact atatcctcag tgtaaggctg ccgcgagagg agcagctcag 841 ctacagctgg gcgtgcttca tcaagtttca ctcggtattt ccccaggtgc tgcacaccat 901 ctccatttgg ctaacggtga cgctggcagt ttggcggtac atagcggtaa gctatccgca 961 aaggaatcgc atctggtgtg gaatgcgaac tactctgatc accatagcca cggcctatgt 1021 tgtctgtgtc ctggtagtgt caccttggct gtacctagtc acagccattg ccaagttcct 1081 agagactttg gatgccaatg gcaagacgat tgcctcagtg ccattgagtc aatacattct 1141 ggactacaat cggcaggatg aggtgaccat gcaggtcatg tcgagtacaa cgccagatgt 1201 ttcctgggcg ataccaagtg attcggccaa tggaactgca gttagcttgc taagtctaac 1261 cacagtgata cccctaacca cattaagcac tggagtaacc acatcctcgt cgttgggtga 1321 gcgcaatgtg actgtctata agctgtatca cagcgcactg gcgctgcgtg atcggcagtt 1381 caggaatgcg accttcctta tatacagtgt cctgatcaag ctgataccct gcttcgcact 1441 gaccattctg tctgtgcggc tcatcggtgc tctgttggag gccaaaagga ggaggaagat 1501 cctggcctgt catgcagcca acgatatgca gccaattgtc aatggaaagg tggtgattcc 1561 gacgcaaccc aagagctgta aactgctgga gaaggagaag cagaccgatc gcaccacgag 1621 gatgcttctg gcggtactgc tgctcttcct ggtcaccgag tttccacagg gcattatggg 1681 tctgctgaat gtgctcctgg gcgatgcctt ctttctgcaa tgttacctaa agctgagtga 1741 ccttatggac atcttggcgc ttattaattc gagcatcaac ttcatcctgt actgttcgat 1801 gagccgccag ttccggagca cgttcgcgct cctcttccgt ccgcgctggc tggacaaatg 1861 gctgccgctg tcgcagcacg acggcgaagg gagggtgggc ggaagtggcg gcctgggcgg 1921 ctacggcgga tatggacggc agcggttgct gcacacggat gccgttagca agagcatggc 1981 catcgatctc gggctgacga cccaagtgac aaatgtgtag caggagagca gcggccgggc 2041 ggcgatgtca gccgcagccg gcggagcagc tgcatcggtg gctctggccc tggcagccac 2101 tgatgttgat ggatgtccgc ctgccaccga tgctgctgtt tccactaacg acatcagcct 2161 ggtcgagaag ctacatttgc agcccagtcc aagggggact gcgatatcca gtggccagca 2221 tcgaaggcgg cgcagtggga gtggcaccaa gtgcatctgg cccacgacgg actggctgag 2281 aaagctgcgt aaccagaagg ctagagaaac ggagcaatcc tccgaacagg acatagagct 2341 gggcaagagc tccatcaaca ggcgcagcag tgttcttcta atggtattac taagcagctc 2401 cgatgaggtt aaagccaagg cggttttggt cagtgaacag ccgccgagtc cagcggacga 2461 ggatgtggaa gacgccattg acgccctctg gctgtgagac gacccctcac ttccattttg 2521 tacgccctgt aaattatcca agtacccact aatatttaac taccgtgtac agaccaatta 2581 ttgagacaaa ttgttatgcg ctgattccat tattttcccg ccagtgttgt cttggcgaat 2641 cgagagcccc tttcgctgag actttgcttt gctggaaaat gagtggattt tccttgaaag 2701 gactccctgg aagcagcctg caacattttg tgaccacatt tgataagtga tatacttgac 2761 taagtttccc cccttaatag ttgtgtaagt gctaagcgcg tctctagata taaacgaatt 2821 agtcatagtc taactattaa ttaagatata ttgatgaaat aattcggaag ctaagagatt 2881 aaatttcttt ttatattgaa taaatgtttt ttcgaagt //