Dbfetch
LOCUS NM_167349 3537 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster uncharacterized protein (CG32645), mRNA. ACCESSION NM_167349 VERSION NM_167349.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3537) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3537) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3537) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3537) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3537) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3537) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3537) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3537) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3537) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3537) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3537) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3537) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3537) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3537) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3537) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3537) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3537) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3537) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3537) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3537) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3537) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3537) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3537) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_167349.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3537 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3537 /gene="CG32645" /locus_tag="Dmel_CG32645" /gene_synonym="CG15716; CG4331; Dmel\CG32645" /map="11E1-11E1" /db_xref="FLYBASE:FBgn0052645" /db_xref="GeneID:32264" CDS 471..3032 /gene="CG32645" /locus_tag="Dmel_CG32645" /gene_synonym="CG15716; CG4331; Dmel\CG32645" /EC_number="2.3.1.-" /note="CG32645 gene product from transcript CG32645-RB; CG32645-PB" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_727670.1" /db_xref="FLYBASE:FBpp0073556" /db_xref="GeneID:32264" /db_xref="FLYBASE:FBgn0052645" /translation="MMRRTLVLAMLLSLLATPQAAIDKDDGKFPPGRHNLSSAPDQHN VINLSLHGDLTAATLLPHVDPKLSYDLSQTRRLRDALNVFDLAVLAAQWGQVESSGGV SANCSRDMRSYLGGLSDAKMWAVKMDDASGHYTSGFFYGNNYWMGSLALCDAIDDGQI VAPGKDNSSSAASSPESETKNSGLPFAAAHTQGYSSVYNAPPPFVPGFYVIKMQLNET LPTQVLRIIYVGMCLPSSCSIADIGQMSSRAHVELPSRDLRVLDIRVPTDKEFNIWAD KTFCLLIVVSSIVLGLICCGTLFEIYLRRKLKEALRRQDKEMMNNSETSSGIGCASSD YSDTMTAHDDPLKQSDHSQSSNSLKQLDALVLNLPPNDNDSGNGHHHDHDAEHDHHDH HRSGSNNSNSDEHLEGHLHEPEKLSIYSELLLSFSAITNFNAICDRNVGADTIPCIHG LRAFSMAWVILGHTCIVVFKYSDNMEMRKEVEQNFFFQAITNGPFSVDTFFFISGFLI SYIYFRTNAKGKLNKLSKGANEFTAGTAHFFGLVAYRFMRLTAPYLFVLGVVQVTMKY LATYSIFDPPTMDHITCPDYWWRNILYINTLFPVDEMCMLWSWYLANDTQFYMIGAII LIVGVRHFKLSAITTLVFLVLSWITTAVIAFTNNHRPNTDDPLALFDKIYDKPWTRLG PYLIGMAVGWILFRTNCKIRLPKLTVATAWTLAMLNLFVLVFGLYKADLSQFTAAAYS SLSHSAWALSLAWITIACSTGYGGYINSLLSAPCLYPFSRVTYCAYLVHPIVIRSMAL NSDAPLHLGGDLMVVMFFGLTVASYFLSFVVSMSFEAPVVTMLKILSPSRKKRLA" ORIGIN 1 cgcagtcgcg attcgtagac gtgcgttcat gccaagcggt cgtcgcagct ccccaaaaat 61 ataaataaag ctgaaaagtt ataataagcc gcgcgtgtgt tttcaataca tttttcccac 121 aactcctatc caaaacaaaa aaaaaaaaca agaaataaaa aataaagtgc taacaaaata 181 aatagaaaag aattaaaccg aattctaacg gttctgccga gtgtgttgat cctccatttt 241 tttttttttt ggttgtgaaa atgctggtgc aaaatacata aataattccc tgttaacccg 301 aattggattt tattattgtt tttttttttt tttgtttgtt tgtcgtgtga agtgaaagtg 361 aagcaggccg gaaaaaaaaa gcaaagcaaa agacatcgca ggaacgtcgt gcccagccaa 421 tttgcatata tacatatatc gactataggg cgcaaacgca gcgtagcgat atgatgcgca 481 ggactttggt gctggcaatg ctgctctcgc tgctggcaac gccacaggcg gccatcgaca 541 aggacgatgg caagtttccg ccgggcagac ataacctaag ttccgctccg gaccagcaca 601 atgtgattaa cctcagtctg cacggagatc ttacggctgc cactctgctg ccccatgtcg 661 atcccaagct tagctatgat ctgtcccaaa cccgacgcct cagggacgcc ctcaacgtct 721 tcgatctcgc cgtcctggcc gcccagtggg gtcaggtgga gagctccggc ggagtgtccg 781 ccaactgcag tcgggacatg aggagctatc taggcgggct cagcgatgcc aagatgtggg 841 ccgtcaagat ggacgatgct tccggtcact atacatccgg tttcttctac ggcaacaact 901 actggatggg ttcgttggcc ctgtgcgatg ccattgacga cggccagatc gttgctcccg 961 gcaaggacaa cagctcctcg gccgcatcct ctccagaaag cgagacgaag aacagcggtc 1021 tgcccttcgc cgccgctcat acccaaggat acagcagtgt ctacaatgct ccgccgccct 1081 tcgttcccgg tttctatgtg atcaagatgc agctcaacga gacgctgccc acccaagtgc 1141 tgcgcatcat ttacgtgggc atgtgcctgc catccagctg ctccattgcg gacatcggcc 1201 agatgagctc cagggcccat gtggagctac catcgcggga tttgcgtgtc ctggacatcc 1261 gtgtgcccac cgacaaggag ttcaacattt gggcggacaa gaccttctgt ctgctgatcg 1321 tggtatctag cattgtgttg ggcttgattt gctgcggcac cctattcgag atttacctga 1381 ggcgcaaact gaaggaggca ctgcgtcgcc aggacaagga gatgatgaac aacagcgaga 1441 cgagttcggg aattggatgt gcgtcgtccg attacagtga cacgatgacc gctcacgatg 1501 atccgctcaa gcaatcggat cactcgcagt cgtcgaattc gctgaagcaa ttggatgctt 1561 tggtactgaa tttgccaccg aacgataatg acagcggcaa tggacaccat cacgatcacg 1621 atgcggaaca cgatcaccac gatcatcatc gcagcgggag caacaatagc aactcggatg 1681 agcacttgga ggggcatctg cacgagccgg aaaagttgag catctactcg gagctgctgc 1741 tctccttctc ggcgataacg aacttcaatg cgatctgcga tcgaaatgtg ggtgcggaca 1801 ccattccgtg catccatgga ctgcgagcct tcagcatggc ctgggtcatc ctgggccaca 1861 cgtgcatcgt ggtcttcaag tactccgata acatggagat gcgcaaggag gtggagcaga 1921 acttcttctt tcaggccatc accaatgggc cgtttagtgt ggacaccttc ttcttcatca 1981 gtggcttcct gatctcgtac atttacttcc gaacgaatgc caaaggcaag ctgaacaagt 2041 taagcaaggg agccaatgag ttcaccgctg gaactgctca ctttttcggc ctggtcgcct 2101 atcggtttat gcgtctcacc gccccctatc tgttcgtcct gggcgttgtc caggtgacca 2161 tgaagtatct ggccacttac tcgatctttg atccacccac catggatcac atcacctgtc 2221 cggattactg gtggcgcaac attctctaca tcaacaccct gtttcctgtc gatgagatgt 2281 gcatgctctg gagttggtat ttggcgaatg acacgcagtt ctatatgatc ggtgccatca 2341 tcctgatcgt gggcgtgcgt cactttaagc tgtcggcgat cacgacactg gtgttcctgg 2401 tgctgtcgtg gatcaccacg gcggtgattg cgttcaccaa caatcatcga ccgaacacgg 2461 acgatccgct ggctctgttc gacaagatct acgacaagcc atggacccgc ctgggtccct 2521 atctgatcgg catggccgtg ggctggattc tattcaggac caactgcaag atccgactgc 2581 ccaagctgac ggtggcaacc gcctggaccc tggccatgct caatctgttc gtcctggtct 2641 tcgggctgta caaggccgac ctgtcacagt tcaccgccgc cgcctacagt tcgctcagcc 2701 attcggcctg ggcgctgtca ctggcctgga tcaccatcgc ctgctccacg ggctacggcg 2761 gctacatcaa ctcgctgctc tcggcgccct gcctctatcc tttctcccgc gtcacctact 2821 gcgcctactt ggtccacccg atagtcatcc gctccatggc gctcaattcg gacgcgccgc 2881 ttcacctggg cggggatctg atggttgtca tgttcttcgg tctgacggtg gcctcctact 2941 tcctgtcctt cgtggtgtcg atgtccttcg aggcgcccgt cgtcacaatg ctgaagatcc 3001 tctcgcctag tcgaaagaaa cgcctcgcct aagtcctgag ccgagatccg accatttccg 3061 attatttata ccctccattt tgtcatgtta tctatttctt gtctatcaaa caatgcccac 3121 atatttatag catcgactca tctgcaccct cgactctttc ggatcgttat ctatacatgt 3181 acttattact ctgcaccaca tttttcactc acaatgtgtt ccagttataa aagttaaaaa 3241 aaaaaaacaa acaaacaaat caaaatcgag gaaaacatga cgtgcaactt gaagcgtgca 3301 aatcaattca acctattttt atcatatttt tgtttcatga tgtgtacatt ttagtccttt 3361 aatttattcc aaaggtttgg aaatttcgcg cgtgacgaag agagagagtt atacatagta 3421 cttcatagtt ataattatat aaaactctag tacctaattt tatgaaatca tgttgtatat 3481 actatatgct gtatattgtt atacataaac ctttaaataa aaactgctac caaatac //