Dbfetch
LOCUS NM_167270 3245 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster Kinesin-like protein at 10A (Klp10A), transcript variant E, mRNA. ACCESSION NM_167270 VERSION NM_167270.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3245) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3245) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3245) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3245) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3245) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3245) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3245) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3245) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3245) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3245) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3245) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3245) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3245) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3245) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3245) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3245) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3245) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3245) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3245) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3245) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3245) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3245) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3245) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_167270.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3245 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3245 /gene="Klp10A" /locus_tag="Dmel_CG1453" /gene_synonym="anon-WO03040301.142; CG1453; DmCG1453; Dmel\CG1453; DmKlp10A; DmKLP10A; KIF 2A; Kif2A; KIF2A/B/C; klp10a; klp10A; KLP10a; KLP10A" /note="Kinesin-like protein at 10A" /map="10A6-10A6" /db_xref="FLYBASE:FBgn0030268" /db_xref="GeneID:32049" CDS 344..2761 /gene="Klp10A" /locus_tag="Dmel_CG1453" /gene_synonym="anon-WO03040301.142; CG1453; DmCG1453; Dmel\CG1453; DmKlp10A; DmKLP10A; KIF 2A; Kif2A; KIF2A/B/C; klp10a; klp10A; KLP10a; KLP10A" /EC_number="5.6.1.3" /note="CG1453 gene product from transcript CG1453-RE; CG1453-PE; Klp10A-PE; kinesin-like protein at 10A; kinesin-like protein 10A; kinesin-13 motor; Kinesin13B" /codon_start=1 /product="Kinesin-like protein at 10A, isoform E" /protein_id="NP_727494.1" /db_xref="FLYBASE:FBpp0073332" /db_xref="GeneID:32049" /db_xref="FLYBASE:FBgn0030268" /translation="MDMITVGQSVKIKRTDGRVHMAVVAVINQSGKCITVEWYERGET KGKEVELDAILTLNPELMQDTVEQHAAPEPKKQATAPMNLSRNPTQSAIGGNLTSRMT MAGNMLNKIQESQSIPNPIVSSNSVNTNSNSNTTAGGGGGTTTSTTTGLQRPRYSQAA TGQQQTRIASAVPNNTLPNPSAAASAGPAAQGVATAATTQGAGGASTRRSHALKEVER LKENREKRRARQAEMKEEKVALMNQDPGNPNWETAQMIREYQSTLEFVPLLDGQAVDD HQITVCVRKRPISRKEVNRKEIDVISVPRKDMLIVHEPRSKVDLTKFLENHKFRFDYA FNDTCDNAMVYKYTAKPLVKTIFEGGMATCFAYGQTGSGKTHTMGGEFNGKVQDCKNG IYAMAAKDVFVTLNMPRYRAMNLVVSASFFEIYSGKVFDLLSDKQKLRVLEDGKQQVQ VVGLTEKVVDGVEEVLKLIQHGNAARTSGQTSANSNSSRSHAVFQIVLRPQGSTKIHG KFSFIDLAGNERGVDTSSADRQTRMEGAEINKSLLALKECIRALGKQSAHLPFRVSKL TQVLRDSFIGEKSKTCMIAMISPGLSSCEHTLNTLRYADRVKELVVKDIVEVCPGGDT EPIEITDDEEEEELNMVHPHSHQLHPNSHAPASQSNNQRAPASHHSGAVIHNNNNNNN KNGNAGNMDLAMLSSLSEHEMSDELIVQHQAIDDLQQTEEMVVEYHRTVNATLETFLA ESKALYNLTNYVDYDQDSYCKRGESMFSQLLDIAIQCRDMMAEYRAKLAKEEMLSCSF NSPNGKR" ORIGIN 1 ggcgaggcga aactaaaaaa ttgtgttgct gacatctggt cgcttgcaaa actatttcta 61 gcagattttg tgatatttcg ttgtgatcgg tcgataaatc cgccagtttt ttttttaatg 121 gaaagtgcta acacattgta gcggttggga agatagcagg aaaggcacat tttgcacacc 181 acaacgtagt tactacatct acgactaacg gaactcctcc tgcaagcagt ggaagttgct 241 gtccatcaag cagtactcgg agttaacgca ggataagccg ggagaaagag aaagagatcg 301 gtggagaata gagatataca ggtggagtca aagaggaagg atcatggaca tgattacggt 361 ggggcagagc gtcaagatca agcggacgga tggccgcgtc cacatggccg tggtggcggt 421 gatcaaccag tcgggcaagt gcatcacagt cgaatggtac gagcgcggcg aaacgaaggg 481 caaggaggta gaactggacg ccatactcac gctcaatccg gagctaatgc aagatactgt 541 cgaacagcac gccgccccgg agcccaagaa acaagccacc gcgccgatga acctctcgcg 601 taatcccaca caatcggcta tcggtggcaa tctcaccagc cgtatgacca tggccggaaa 661 catgctgaac aagatccagg aaagccagtc gattcccaat ccgattgtca gcagcaatag 721 cgtgaataca aacagcaact ccaacactac ggccggcgga ggtggtggca ccacaacgtc 781 gacgaccact ggattacagc gtccacggta ctcgcaagct gctaccggcc agcagcagac 841 aaggatcgcc tcggcggtgc ctaataacac attgcccaat cccagcgcgg cagccagtgc 901 tggtccggcg gcacaaggag tcgccactgc ggccacaacc cagggagctg gcggcgctag 961 tacccggcga tcgcacgcat tgaaagaggt ggagcgactg aaggagaatc gcgagaagcg 1021 acgcgcccga caggccgaga tgaaggagga gaaggtggcg ctgatgaacc aggatccggg 1081 caatccaaac tgggagacgg cgcaaatgat acgcgaatat cagagcacgc tggaatttgt 1141 gccgctgctc gatggccagg ccgtcgatga ccatcagatc acagtgtgcg tgcgcaagcg 1201 tcccattagc cgcaaggagg tcaatcgcaa ggagatcgat gtcatttcgg tgccgcgcaa 1261 ggacatgctc atcgtgcacg agccgcgcag caaggtcgac ctcaccaagt tcctggagaa 1321 ccacaagttt cgcttcgact acgccttcaa cgacacgtgc gacaatgcca tggtatacaa 1381 atacacagcc aagccgttgg tgaaaaccat tttcgagggc ggaatggcga cgtgcttcgc 1441 ctacggccag acgggatcgg gcaaaacgca caccatgggc ggtgagttta atggaaaggt 1501 gcaggactgc aagaacggca tctacgccat ggcggccaag gatgtctttg tgaccctgaa 1561 tatgccgcgt taccgcgcca tgaatctagt cgtctcggcc agtttctttg agatttacag 1621 tggcaaggtc ttcgatcttc tgtccgacaa gcagaaactg cgcgtcctgg aggatggtaa 1681 acagcaagtg caggtggtgg gactcaccga gaaggtggtc gatggcgtcg aggaggtact 1741 gaagctcatc cagcacggca atgctgcccg aacatccggc cagacgtcgg ccaactccaa 1801 ttcgtcgcgt tcgcacgccg ttttccagat tgtgctgcgg ccgcagggct cgacgaagat 1861 ccatggcaag ttctcgttca tcgatctggc gggcaatgag cggggcgtgg acacttcctc 1921 ggccgatcgg cagacgcgta tggagggtgc cgagattaac aaatcgctgc tggccctcaa 1981 ggagtgcatt cgtgcgttgg gcaaacagtc ggcccacttg cccttccgtg tctccaaact 2041 cacccaggtg ctgcgcgact cgttcattgg cgagaagagc aagacgtgca tgatagccat 2101 gatctcgccg ggacttagct cctgcgagca cacgctcaac acgctgcgct atgcggatcg 2161 tgtcaaggag ctggtggtca aggatatcgt cgaagtttgc cctggcggcg acaccgagcc 2221 catcgagatc acggacgacg aggaggagga ggagctcaac atggtgcatc cgcactcgca 2281 tcagctgcat cccaattcgc atgcaccggc cagccagtcg aataatcagc gtgctccggc 2341 ctctcatcac tcgggggcgg tcattcacaa caataataat aacaacaaca agaacggaaa 2401 cgccggcaac atggacctgg ccatgctgag ttcgctgagc gaacacgaga tgtccgacga 2461 gctgattgtg cagcaccagg ccatcgacga cctgcagcag acggaggaga tggtggtgga 2521 gtatcatcgc accgttaatg ccacactgga gaccttcctc gccgagtcga aggcgctgta 2581 caatctgacc aactatgtgg actacgacca ggactcgtac tgcaaacggg gcgagtcgat 2641 gttctcgcag ctgctggaca tcgccatcca gtgccgcgac atgatggccg aatatcgcgc 2701 caagttggcc aaggaggaga tgctgtcgtg cagcttcaat tcgccgaatg gcaagcgtta 2761 gttcattccc gcattcgacc cgttcatcca caatcaccaa caatcatcca ccacacccaa 2821 ccaggcgtac actttacatt acaaattccc tctggcttcc caatggacgt gtctgtcgtg 2881 cagtccccta aaacaatctc tctatcacct ttgccccaaa ccgtcgagtt tatgtcgctg 2941 cgagtttatg gtttattaag tttttaactg ataaataata gtcgagagcc tatattttac 3001 aaacgaacta agcacgggaa cagaccagat accacagcat taataccatt atgagagcaa 3061 cgcaaaccaa taaaaaggaa ctcaactgaa aactgaagac aggctaggct ggctggccac 3121 gactttgttt ggattcgccg tgaactatga ttatatgaat ataattgtaa tttcagcgca 3181 gtcgatactc taattgtgta aaagaaaaag acatttacta tacaatatat atatatttac 3241 tactt //