Dbfetch
LOCUS NM_166881 3726 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster uncharacterized protein, transcript variant I (CG32813), mRNA. ACCESSION NM_166881 VERSION NM_166881.4 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3726) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3726) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3726) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 3726) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 3726) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 3726) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 3726) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 3726) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 3726) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 3726) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 3726) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 3726) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 3726) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 3726) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 3726) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 3726) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 3726) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 3726) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 3726) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 3726) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 3726) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 3726) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 3726) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_166881.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3726 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3726 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /map="2A1-2A1" /db_xref="FLYBASE:FBgn0052813" /db_xref="GeneID:31089" CDS 1095..2813 /gene="CG32813" /locus_tag="Dmel_CG32813" /gene_synonym="anon-WO0153538.75; CG11446; CG14771; Dmel\CG32813" /note="CG32813 gene product from transcript CG32813-RI; CG32813-PI" /codon_start=1 /product="uncharacterized protein, isoform I" /protein_id="NP_726733.2" /db_xref="FLYBASE:FBpp0303350" /db_xref="GeneID:31089" /db_xref="FLYBASE:FBgn0052813" /translation="MEKTPRYTQRERNMVLSYAAQYKDVIENKRTDAESNRKKDEVWL QIAKEFNSRVYHQRSAKQLRQLYKNMKLLLKKDLCGEDKSNHSFMDLLNTLSHQESVA QYIAEQLSPEGAGGGGGGGKQGGAGNGGGNGHQSDDYDDSKMPHYHEGMDTDVILIKS ETISDNEQTDNGMDCLDEDDDDDCLSHKAPEVCLEEEDDVLFPTDVRQLQQVGSSGAA GGGVSGGSLPGNMSSNGITETSRRAASSPVCSTKTSISSSGSYASAPKPDITIQTVGH IRVGSFANINKTLQNGGSGTGAVLSAASNGGSSASGVLPLTAEQVQQHTLLNGLGLSA VNPAQSLQAAINAAYGSAAPSSSVAISSRRTPPTLQLPRLQRGNINNSHHTAGSTSNS AVASNGVQLLLNGGHHAQMTHNHLARDKTGGVAIGAAGSFNGYNGLAVAGTVCSALNS SGSGAGSGGSSANNSGVGLGIGGAHTSGSGGSGSGGTRSQHQELMNSLRIEESKRKID LINAQIEYWQTLTRKLNSQANHMPNPACPCHFPGASVLSPVAVTAASASSSASANVLQ TQASTS" ORIGIN 1 gacatttgac gtcgcgcgtt cgcttcgccc gtttcagcag cgttgccgcc gaaagcagag 61 tgttgttgtt gccgttgccg ttgcgtcgtg ttgcgttgcg ttgttgtttg ccgtgccgat 121 tttattgtta tttgaaatcg gtcgcggagc gtgcggtgcg gagcagtgct cctttttttt 181 tctacttttt gtttagttcc gggtcagggg gcgtccaagg tttaaagcaa caactgtgag 241 cagtgaaaaa aaaaataaca gaacgagcgt tcagctataa acgatatcaa acccaatagg 301 aagaaacgca cacaaagagc cgaaaacaaa gtcttcgcca gagagcgctg agtgggacgg 361 agaagggaag aggcaatagc gagcgggaca gcgagcggct ggcggtcagc gacgttggac 421 aagtagttga aaatattgcg catacgccgc gtgaaccaga ggcacagagt agagcagcaa 481 gccgcgcgtt cttcgttctg catcgcacaa atacagcttt gagaaagcca gcagaggagt 541 ggggtgcaag gaaacacatt acgcatcgag gaggagaagg aggagaagga gaagaaggag 601 gagacgagga gggccgagga ttagcggctg cgaaggaagt ccatttcaaa gtgcagccgg 661 ccacaaatcc agaactagaa tctcacatcc aactccgatt cccaaaccga atcggatcgc 721 gcttctcgcc tgtcgttgct gtcgcccgag atcggagatt gcacaacgct ggccatcagt 781 ttcaagcgct tttgctacgc tcactaacac acgccaccca ttgaggcggt gagcgctgcc 841 cgattccacg atttcgctgc tctgccagta gcggtggtag taaaaattgt caactcaagc 901 gctgcggtcg gcgacgctcg gggaaaatgc gtattcctcg ccctcgcccc cacgctcatc 961 accccgcagg aaggcagaag cacgcgcgga ctacgaggag ccaccagttg gtcacgagga 1021 agagcagaag aatagcacgc accaccagct cgatcgtggg acgcagcttc acgacgtctt 1081 gcaaacggtt gaaaatggag aagactcccc ggtacacgca gcgggagcgg aacatggtgt 1141 tgagctacgc ggcgcagtac aaggatgtga tcgagaacaa gcgcacggac gcggagtcca 1201 accgcaagaa ggacgaggtg tggctgcaga tcgccaagga gttcaactcg cgggtctacc 1261 accagcgcag cgccaagcag ctgcgccagc tttacaagaa catgaagctg ctgctcaaaa 1321 aggacctatg cggcgaggac aagagcaacc attcgttcat ggacctgctc aacacgctgt 1381 cgcaccagga gtccgtggcc cagtacattg ccgagcagct gtcgccggag ggcgcgggcg 1441 gtggcggcgg cggcggtaag caaggcggcg cgggcaacgg aggcggaaac ggacaccaat 1501 cggacgacta cgacgactcc aagatgcccc actaccacga gggcatggac acggacgtga 1561 tccttatcaa gtcggagaca attagcgaca acgagcagac ggacaatggc atggactgcc 1621 tggacgagga cgatgacgac gactgcttga gccacaaggc gccggaggtg tgcctcgagg 1681 aggaggacga cgtgctcttt ccaacggacg tgcgccagct gcagcaggtg ggatcgtccg 1741 gagccgccgg cggtggtgtc tccggaggct cccttcccgg aaacatgtct agcaacggga 1801 ttaccgaaac cagtcgccgc gccgcaagct cgcccgtgtg ctccacgaag acctcgatta 1861 gttccagcgg gagctacgca tcagcgccca aaccggacat cactatccag accgtgggcc 1921 acatacgcgt gggcagcttt gccaacatca acaagacgct gcagaacggc ggctccggca 1981 caggagctgt cctatcagcg gccagcaatg gcggctccag tgccagtgga gtgctgccgc 2041 tcacagcgga gcaagtgcag cagcacacgc tgctgaacgg cctaggattg tccgccgtga 2101 atccggctca gtctctgcag gcggccatca atgccgccta tgggtccgcc gctccatctt 2161 catcggtcgc cattagcagc cgccgcaccc ctcccactct gcagttgcca cgccttcagc 2221 gcggaaacat caacaatagc caccacactg ccggcagcac aagcaattcc gcggtggcct 2281 ccaatggagt gcaactgttg ctcaacggcg gccaccacgc acagatgacg cacaaccatt 2341 tggcgcggga caagacagga ggcgtggcca tcggggcggc gggcagtttc aacgggtaca 2401 acggactggc agtggcgggc acagtgtgca gcgccttgaa cagcagcgga tccggagccg 2461 gaagcggcgg gagcagtgcc aacaacagcg gcgtgggcct ggggatcggc ggggcacaca 2521 cgtcgggcag cggaggaagt ggcagcggtg ggacgaggag ccagcaccag gagctgatga 2581 attcgctgag gatcgaggag agcaagcgga aaatcgacct gatcaacgcc caaatcgaat 2641 actggcagac gctcacccgc aagctgaaca gtcaggcgaa tcacatgccc aatcctgcgt 2701 gcccgtgcca cttccctgga gccagtgtgc tctcgcccgt cgccgtgacc gccgctagtg 2761 cctcatcgtc cgcttccgcc aatgtgttgc agacgcaggc cagcaccagc tagtccgcag 2821 ccaaggggcg gttcgaacta gtcgggggtc ctgcgggcga aagcgaaagc gacagcgaca 2881 tcatctcgat agtggacata gatgatgggc ggtctaggga ggacgagcag tcggaggacg 2941 atggcgagaa ccgtgaccag gccataacgg acctgacgct acccgacgaa gacgaggaag 3001 acgatgtaga cgaagatgac tcacaggatg ccttggtcag ggatgttggc gtggtgggcg 3061 gcctgtcgtc gccagataca ccgccccact cctctccgcc gccagcgaag cgctcgaagc 3121 gccaggaagt cacctccgag ctcctgaggc agctggccct gcagcagaat caggatcccc 3181 aggaggggtg ctagtatttt gtctagtttg ctaattttat acttgctacc atggattgac 3241 gcaaccactt tgtaacatta attttaccat atatatttat ttacgcccag tttgagtgcc 3301 aaaacagaaa ccaagattgg ggccttgcca tcgaaaatgc ttgccaaagg acctgctgaa 3361 ataaccggtc ataaccactc gcgacccact atttatttgc cagcctaact gaaacatagc 3421 gattcatctc attttaaaat gtcttgcgtc gcctattttt ttattgcctt tttttttcta 3481 tacatgtaac gtgtttattt ttaagttttc ctacgagctg ctaccaaaaa gaataagaag 3541 aagaaggtga ctatcttgaa tgtacattta ctttacaaaa ctagacctta cttacttact 3601 taattagaga tcgagcagct aagaacgcat gaaaatgaaa tgtacaaatg tggttcctaa 3661 tctagtccct aaagtcaaaa gtgaagaacg aaagagctac agaaaagaaa tcgaaattgt 3721 tacgcc //